Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 9
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g071800.1.1 | Tomato | plastid, vacuole | 96.93 | 96.93 |
| PGSC0003DMT400015199 | Potato | vacuole | 82.35 | 82.35 |
| VIT_06s0009g00850.t01 | Wine grape | cytosol | 70.08 | 78.06 |
| Bra018623.1-P | Field mustard | cytosol | 63.43 | 70.66 |
| AT1G08470.1 | Thale cress | endoplasmic reticulum, vacuole | 69.57 | 69.74 |
| CDX95058 | Canola | vacuole | 65.98 | 68.98 |
| CDX93560 | Canola | vacuole | 68.03 | 67.68 |
| HORVU5Hr1G114720.1 | Barley | plastid | 32.23 | 66.32 |
| GSMUA_Achr3P30810_001 | Banana | endoplasmic reticulum, vacuole | 65.47 | 65.81 |
| KRH26734 | Soybean | vacuole | 60.87 | 65.21 |
| KRH56180 | Soybean | endoplasmic reticulum | 71.61 | 63.49 |
| EER90869 | Sorghum | vacuole | 63.68 | 62.56 |
| GSMUA_Achr8P04740_001 | Banana | endoplasmic reticulum, golgi, vacuole | 66.24 | 62.41 |
| KRH22599 | Soybean | vacuole | 60.87 | 61.82 |
| TraesCS5D01G400000.1 | Wheat | golgi | 61.89 | 60.8 |
| HORVU5Hr1G095260.1 | Barley | extracellular | 61.64 | 60.4 |
| TraesCS5A01G390200.1 | Wheat | golgi | 61.38 | 60.3 |
| TraesCS5B01G395100.1 | Wheat | vacuole | 61.13 | 59.9 |
| Os03t0750700-01 | Rice | plasma membrane | 60.87 | 59.65 |
| HORVU5Hr1G114800.1 | Barley | extracellular | 29.92 | 54.42 |
| Zm00001d034032_P001 | Maize | plasma membrane | 64.45 | 46.75 |
| PGSC0003DMT400076777 | Potato | vacuole | 43.48 | 45.7 |
| PGSC0003DMT400044531 | Potato | vacuole | 43.48 | 45.58 |
| PGSC0003DMT400007661 | Potato | vacuole | 43.22 | 44.59 |
| PGSC0003DMT400044685 | Potato | extracellular | 29.92 | 43.49 |
| PGSC0003DMT400044684 | Potato | vacuole | 38.87 | 43.43 |
| PGSC0003DMT400030927 | Potato | golgi, plasma membrane, vacuole | 42.71 | 41.03 |
| PGSC0003DMT400063282 | Potato | extracellular, vacuole | 16.11 | 40.65 |
| PGSC0003DMT400063277 | Potato | vacuole | 31.2 | 36.75 |
| PGSC0003DMT400056839 | Potato | vacuole | 28.9 | 36.22 |
| PGSC0003DMT400048627 | Potato | cytosol, golgi, mitochondrion, vacuole | 31.2 | 35.78 |
| HORVU6Hr1G025030.1 | Barley | cytosol | 9.97 | 35.14 |
| PGSC0003DMT400063274 | Potato | vacuole | 28.64 | 33.33 |
| PGSC0003DMT400063286 | Potato | vacuole | 28.13 | 32.93 |
| PGSC0003DMT400001736 | Potato | cytosol, peroxisome, vacuole | 23.02 | 32.49 |
| PGSC0003DMT400005990 | Potato | cytosol | 23.02 | 31.14 |
| PGSC0003DMT400003995 | Potato | golgi, vacuole | 25.83 | 27.01 |
Protein Annotations
| EntrezGene:102605007 | Gene3D:2.120.10.30 | MapMan:50.4.3 | InterPro:6-blade_b-propeller_TolB-like | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016844 | InterPro:IPR011042 | UniProt:M0ZTF7 |
| PFAM:PF03088 | EnsemblPlantsGene:PGSC0003DMG400002989 | PGSC:PGSC0003DMG400002989 | EnsemblPlants:PGSC0003DMT400007732 | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF24 |
| SUPFAM:SSF63829 | SignalP:SignalP-noTM | InterPro:Strictosidine_synth_cons-reg | InterPro:Strictosidine_synthase | UniParc:UPI00029652F1 | RefSeq:XP_006340314.1 |
Description
Strictosidine synthase [Source:PGSC_GENE;Acc:PGSC0003DMG400002989]
Coordinates
chr11:-:43254527..43258781
Molecular Weight (calculated)
44065.7 Da
IEP (calculated)
6.920
GRAVY (calculated)
-0.241
Length
391 amino acids
Sequence
(BLAST)
(BLAST)
001: MRAASVFGGV FLVLAVYCGL DPFKHSAISE FPNFESFKVE MPAWSEIPVE KDSQNLLQKS EIKFLDQIQG PESIVFDPQG RGPYTGIADG RVVFWDGEKW
101: NDFAYTSANR SGLCDPKPSP LSYMKNEHIC GRPLGLRFDK RTGDLYIADA YLGLMKVGPE GGLAESLTTE AEGIPIGFAN DLDVDDEGNV YFTDSSTKYQ
201: RRNFVQLVFS AEDSGKVLKY NPRTKETTVL IRNLQFPNGL SLSKDGSFFI FCEGSKGRLR KYWLKGEKAG TSEVIAILPG YPDNVRANER NEFWVAIHCR
301: RTIYSYINAI YPQLRQFLLK LPISAKLQYL IHIGGRFTAV VVRYSSEGKL LQILEDRQGK VVRAVSEVEE RDGKLWMGSV LMSFISVYQL E
101: NDFAYTSANR SGLCDPKPSP LSYMKNEHIC GRPLGLRFDK RTGDLYIADA YLGLMKVGPE GGLAESLTTE AEGIPIGFAN DLDVDDEGNV YFTDSSTKYQ
201: RRNFVQLVFS AEDSGKVLKY NPRTKETTVL IRNLQFPNGL SLSKDGSFFI FCEGSKGRLR KYWLKGEKAG TSEVIAILPG YPDNVRANER NEFWVAIHCR
301: RTIYSYINAI YPQLRQFLLK LPISAKLQYL IHIGGRFTAV VVRYSSEGKL LQILEDRQGK VVRAVSEVEE RDGKLWMGSV LMSFISVYQL E
001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP
Arabidopsis Description
SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.