Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G016850.1 | Barley | cytosol | 61.4 | 75.86 |
| HORVU7Hr1G019170.1 | Barley | cytosol | 60.47 | 75.58 |
| HORVU6Hr1G025030.1 | Barley | cytosol | 35.81 | 69.37 |
| HORVU5Hr1G095260.1 | Barley | extracellular | 97.21 | 52.38 |
| TraesCS5A01G390200.1 | Wheat | golgi | 92.56 | 50.0 |
| TraesCS5D01G400000.1 | Wheat | golgi | 92.09 | 49.75 |
| TraesCS5B01G395100.1 | Wheat | vacuole | 92.09 | 49.62 |
| Os03t0750700-01 | Rice | plasma membrane | 81.86 | 44.11 |
| EER90869 | Sorghum | vacuole | 80.47 | 43.47 |
| GSMUA_Achr3P30810_001 | Banana | endoplasmic reticulum, vacuole | 63.72 | 35.22 |
| CDX92388 | Canola | vacuole | 57.21 | 33.61 |
| Zm00001d034032_P001 | Maize | plasma membrane | 79.07 | 31.54 |
| HORVU2Hr1G013460.2 | Barley | golgi, mitochondrion, vacuole | 42.33 | 31.27 |
| Bra002383.1-P | Field mustard | vacuole | 57.21 | 31.14 |
| CDY16615 | Canola | endoplasmic reticulum, extracellular, vacuole | 56.74 | 30.89 |
| PGSC0003DMT400015199 | Potato | vacuole | 55.81 | 30.69 |
| VIT_06s0009g00850.t01 | Wine grape | cytosol | 49.77 | 30.48 |
| KRH26734 | Soybean | vacuole | 51.63 | 30.41 |
| AT5G22020.2 | Thale cress | vacuole | 55.35 | 30.13 |
| PGSC0003DMT400007732 | Potato | vacuole | 54.42 | 29.92 |
| Bra018623.1-P | Field mustard | cytosol | 48.84 | 29.91 |
| CDX95058 | Canola | vacuole | 51.63 | 29.68 |
| CDX93560 | Canola | vacuole | 53.95 | 29.52 |
| Solyc11g071800.1.1 | Tomato | plastid, vacuole | 53.49 | 29.41 |
| AT1G08470.1 | Thale cress | endoplasmic reticulum, vacuole | 51.63 | 28.46 |
| KRH22599 | Soybean | vacuole | 50.7 | 28.31 |
| HORVU5Hr1G078340.1 | Barley | golgi, vacuole | 30.7 | 27.05 |
| KRH56180 | Soybean | endoplasmic reticulum | 53.49 | 26.08 |
| HORVU2Hr1G012970.2 | Barley | mitochondrion | 42.33 | 26.0 |
| HORVU7Hr1G028550.2 | Barley | plastid | 21.4 | 25.84 |
| Solyc06g073910.2.1 | Tomato | cytosol, plasma membrane, vacuole | 34.88 | 24.67 |
| HORVU3Hr1G065520.3 | Barley | extracellular | 36.28 | 24.22 |
| HORVU5Hr1G058910.2 | Barley | endoplasmic reticulum, extracellular, vacuole | 38.6 | 23.99 |
| HORVU5Hr1G093840.1 | Barley | vacuole | 37.21 | 23.6 |
| HORVU7Hr1G028580.1 | Barley | golgi, vacuole | 37.21 | 22.73 |
| HORVU5Hr1G058940.2 | Barley | vacuole | 38.14 | 22.34 |
| HORVU5Hr1G091230.1 | Barley | golgi, mitochondrion, plastid, vacuole | 36.74 | 22.19 |
| HORVU3Hr1G109810.1 | Barley | golgi, vacuole | 35.35 | 21.78 |
| HORVU6Hr1G026020.1 | Barley | cytosol | 24.19 | 20.97 |
| HORVU4Hr1G061230.2 | Barley | peroxisome, vacuole | 41.4 | 20.79 |
| HORVU3Hr1G074780.3 | Barley | cytosol, vacuole | 33.49 | 19.25 |
| HORVU5Hr1G043200.4 | Barley | vacuole | 32.56 | 18.72 |
| HORVU2Hr1G064060.1 | Barley | mitochondrion, vacuole | 21.86 | 18.5 |
| HORVU1Hr1G052450.8 | Barley | extracellular, golgi, vacuole | 25.12 | 14.67 |
| HORVU5Hr1G009400.2 | Barley | cytosol, mitochondrion, plastid, vacuole | 1.4 | 2.21 |
| HORVU5Hr1G114720.1 | Barley | plastid | 1.4 | 1.58 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G114800.1 | EnsemblPlantsGene:HORVU5Hr1G114800 | Gene3D:2.120.10.30 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016844 | InterPro:6-blade_b-propeller_TolB-like | InterPro:IPR011042 | InterPro:Strictosidine_synthase |
| PANTHER:PTHR10426 | PANTHER:PTHR10426:SF24 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF63829 | TMHMM:TMhelix |
| UniParc:UPI000B47D466 | UniProt:A0A287STT7 | MapMan:50.4.3 | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:644557740..644558595
Molecular Weight (calculated)
23011.0 Da
IEP (calculated)
4.688
GRAVY (calculated)
-0.158
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MASAGVVAAA VVVAALAAFC ATDPLRLGSM VDFPGFEAHP VELPDAAEMP PHADAGERLR GAEIRFRGEV QGPESVAFDP RGRGPYTGVA DGRVLVWDGA
101: RWAYFAHASP AWTADRCGGP KASPTEYLRD EHVCGRALGI RFDKRTGDLY IADAYFGLSK VGPEGGLATP LATEAEGVRF NFTNDLDLDA DGNVYFTDSS
201: VLYQRRSVMP ARPDF
101: RWAYFAHASP AWTADRCGGP KASPTEYLRD EHVCGRALGI RFDKRTGDLY IADAYFGLSK VGPEGGLATP LATEAEGVRF NFTNDLDLDA DGNVYFTDSS
201: VLYQRRSVMP ARPDF
001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP
Arabidopsis Description
SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.