Factsheet for HORVU7Hr1G019170.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G016850.1	Barley	cytosol	86.05	85.06
HORVU6Hr1G025030.1	Barley	cytosol	47.67	73.87
HORVU5Hr1G114800.1	Barley	extracellular	75.58	60.47
HORVU5Hr1G095260.1	Barley	extracellular	76.16	32.83
HORVU2Hr1G013460.2	Barley	golgi, mitochondrion, vacuole	31.4	18.56
HORVU5Hr1G078340.1	Barley	golgi, vacuole	24.42	17.21
HORVU2Hr1G012970.2	Barley	mitochondrion	31.4	15.43
HORVU3Hr1G065520.3	Barley	extracellular	26.74	14.29
HORVU4Hr1G061230.2	Barley	peroxisome, vacuole	35.47	14.25
HORVU7Hr1G028580.1	Barley	golgi, vacuole	29.07	14.2
HORVU5Hr1G058940.2	Barley	vacuole	30.23	14.17
HORVU5Hr1G058910.2	Barley	endoplasmic reticulum, extracellular, vacuole	28.49	14.16
HORVU5Hr1G091230.1	Barley	golgi, mitochondrion, plastid, vacuole	29.07	14.04
HORVU5Hr1G093840.1	Barley	vacuole	27.33	13.86
HORVU3Hr1G109810.1	Barley	golgi, vacuole	27.33	13.47
HORVU7Hr1G028550.2	Barley	plastid	13.37	12.92
HORVU5Hr1G043200.4	Barley	vacuole	27.33	12.57
HORVU3Hr1G074780.3	Barley	cytosol, vacuole	27.33	12.57
HORVU6Hr1G026020.1	Barley	cytosol	14.53	10.08
HORVU1Hr1G052450.8	Barley	extracellular, golgi, vacuole	18.02	8.42
HORVU2Hr1G064060.1	Barley	mitochondrion, vacuole	12.21	8.27
HORVU5Hr1G114720.1	Barley	plastid	0.58	0.53
HORVU5Hr1G009400.2	Barley	cytosol, mitochondrion, plastid, vacuole	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU7Hr1G019170.1	EnsemblPlantsGene:HORVU7Hr1G019170	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:Strictosidine_synthase
PANTHER:PTHR10426	PANTHER:PTHR10426:SF24	SUPFAM:SSF63829	UniParc:UPI000B4644E6	UniProt:A0A287VLB6	MapMan:50.4.3

Description

No Description!

Coordinates

chrchr7H:+:25624353..25625147

Molecular Weight (calculated)

18675.3 Da

IEP (calculated)

8.085

GRAVY (calculated)

-0.328

Length

172 amino acids

Sequence
(BLAST)

001: SSRLSPIHPP NALPPSDPIC AKDLLRLGSM VDFSGFEAHP VDLPDAAKMP LHADVGERLR GPEIRFRGEV RGPESVAFDP RGRAPYTGVA DGRVLVWDGA
101: QSAYLAHASP AWTVDLCGGP KAFPTKYLRD EHVCGRALGI RFDKRTGDLY IADAYFGLSK VGPEGRFLNP PR

Best Arabidopsis Sequence Match ( AT1G08470.1 )
(BLAST)

001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP

Arabidopsis Description

SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.