Factsheet for HORVU5Hr1G095260.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G114720.1	Barley	plastid	47.62	100.0
HORVU5Hr1G114800.1	Barley	extracellular	52.38	97.21
TraesCS5A01G390200.1	Wheat	golgi	96.74	96.98
TraesCS5D01G400000.1	Wheat	golgi	96.74	96.98
TraesCS5B01G395100.1	Wheat	vacuole	96.49	96.49
Os03t0750700-01	Rice	plasma membrane	86.72	86.72
EER90869	Sorghum	vacuole	86.47	86.68
HORVU4Hr1G016850.1	Barley	cytosol	33.33	76.44
HORVU7Hr1G019170.1	Barley	cytosol	32.83	76.16
GSMUA_Achr3P30810_001	Banana	endoplasmic reticulum, vacuole	68.92	70.69
HORVU6Hr1G025030.1	Barley	cytosol	19.3	69.37
VIT_06s0009g00850.t01	Wine grape	cytosol	59.65	67.81
Solyc06g073910.2.1	Tomato	cytosol, plasma membrane, vacuole	49.37	64.8
Zm00001d034032_P001	Maize	plasma membrane	86.22	63.82
Bra018623.1-P	Field mustard	cytosol	55.39	62.96
PGSC0003DMT400015199	Potato	vacuole	61.15	62.4
CDX92388	Canola	vacuole	56.64	61.75
PGSC0003DMT400007732	Potato	vacuole	60.4	61.64
Bra002383.1-P	Field mustard	vacuole	60.65	61.27
Solyc11g071800.1.1	Tomato	plastid, vacuole	59.9	61.13
AT5G22020.2	Thale cress	vacuole	60.4	61.01
CDY16615	Canola	endoplasmic reticulum, extracellular, vacuole	60.4	61.01
AT1G08470.1	Thale cress	endoplasmic reticulum, vacuole	58.65	60.0
CDX93560	Canola	vacuole	58.4	59.29
CDX95058	Canola	vacuole	54.64	58.29
KRH26734	Soybean	vacuole	52.13	56.99
KRH56180	Soybean	endoplasmic reticulum	60.65	54.88
KRH22599	Soybean	vacuole	51.63	53.51
HORVU2Hr1G013460.2	Barley	golgi, mitochondrion, vacuole	33.33	45.7
HORVU6Hr1G026020.1	Barley	cytosol	26.82	43.15
HORVU2Hr1G012970.2	Barley	mitochondrion	37.59	42.86
HORVU5Hr1G093840.1	Barley	vacuole	36.09	42.48
HORVU5Hr1G058910.2	Barley	endoplasmic reticulum, extracellular, vacuole	36.09	41.62
HORVU3Hr1G065520.3	Barley	extracellular	33.33	41.3
HORVU2Hr1G064060.1	Barley	mitochondrion, vacuole	25.06	39.37
HORVU5Hr1G058940.2	Barley	vacuole	35.59	38.69
HORVU7Hr1G028580.1	Barley	golgi, vacuole	33.83	38.35
HORVU4Hr1G061230.2	Barley	peroxisome, vacuole	41.1	38.32
HORVU3Hr1G109810.1	Barley	golgi, vacuole	32.58	37.25
HORVU5Hr1G043200.4	Barley	vacuole	34.84	37.17
HORVU5Hr1G091230.1	Barley	golgi, mitochondrion, plastid, vacuole	33.08	37.08
HORVU7Hr1G028550.2	Barley	plastid	16.04	35.96
HORVU5Hr1G009400.2	Barley	cytosol, mitochondrion, plastid, vacuole	12.03	35.29
HORVU5Hr1G078340.1	Barley	golgi, vacuole	21.55	35.25
HORVU3Hr1G074780.3	Barley	cytosol, vacuole	30.58	32.62
HORVU1Hr1G052450.8	Barley	extracellular, golgi, vacuole	27.82	30.16

Protein Annotations

Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	UniProt:A0A287SCX5	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016020	GO:GO:0016844
EnsemblPlantsGene:HORVU5Hr1G095260	EnsemblPlants:HORVU5Hr1G095260.1	InterPro:IPR011042	PFAM:PF03088	PANTHER:PTHR10426	PANTHER:PTHR10426:SF24
SUPFAM:SSF63829	SignalP:SignalP-noTM	InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	TMHMM:TMhelix	UniParc:UPI000B45FCED
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:597954326..597964558

Molecular Weight (calculated)

43813.2 Da

IEP (calculated)

6.678

GRAVY (calculated)

-0.151

Length

399 amino acids

Sequence
(BLAST)

001: MASAGVVAAA VVVAALAAFC ATDPLRLGSM VDFPGFEAHP VELPDAAEMP PHADAGERLR GAEIRFRGEV QGPESVAFDP RGRGPYTGVA DGRVLVWDGA
101: RWAYFAHASP AWTADRCGGP KASPTEYLRD EHVCGRALGI RFDKRTGDLY IADAYFGLSK VGPEGGLATP LATEAEGVRF NFTNDLDLDA DGNVYFTDSS
201: VLYQRRHFMQ LVFSGDASGR LLKYNPQTKE TTVLHRNLQF PNGVSLSKDG SFFVFCEGSR GRLSRYWLKG EKAGTVDLFA ILPGFPDNVR TNDKGEFWVA
301: IHCRRSAYAR LLSHRVQLRK FLLSLPIPAK YHYLMQIGGN LHALIIKYSP EGEVLDILED TKGQVVRAVS EVEEKDGKLW IGSVLMPFIA VFDYAKESG

Best Arabidopsis Sequence Match ( AT1G08470.1 )
(BLAST)

001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP

Arabidopsis Description

SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.