Factsheet for HORVU6Hr1G026020.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G009400.2	Barley	cytosol, mitochondrion, plastid, vacuole	47.58	86.76
Zm00001d029115_P001	Maize	extracellular, vacuole	71.77	76.07
TraesCS2B01G092900.1	Wheat	golgi, vacuole	90.73	65.79
TraesCS2D01G076200.1	Wheat	vacuole	90.73	65.6
TraesCSU01G189700.1	Wheat	vacuole	90.32	65.31
TraesCS2D01G076400.1	Wheat	vacuole	90.32	65.31
HORVU2Hr1G012970.2	Barley	mitochondrion	90.73	64.29
HORVU2Hr1G013460.2	Barley	golgi, mitochondrion, vacuole	70.56	60.14
OQU75879	Sorghum	vacuole	74.19	60.13
Os08t0175000-00	Rice	golgi, mitochondrion, vacuole	78.63	54.78
Zm00001d029117_P001	Maize	vacuole	74.19	54.44
Zm00001d029111_P001	Maize	vacuole	74.19	54.44
Zm00001d029108_P001	Maize	vacuole	68.55	53.63
KXG39404	Sorghum	golgi, vacuole	73.39	53.37
HORVU5Hr1G093840.1	Barley	vacuole	72.58	53.1
HORVU3Hr1G065520.3	Barley	extracellular	66.13	50.93
HORVU2Hr1G064060.1	Barley	mitochondrion, vacuole	49.19	48.03
Os08t0442200-01	Rice	extracellular	66.53	47.14
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	46.77	37.42
HORVU7Hr1G028550.2	Barley	plastid	26.21	36.52
HORVU5Hr1G058910.2	Barley	endoplasmic reticulum, extracellular, vacuole	50.4	36.13
HORVU5Hr1G058940.2	Barley	vacuole	52.82	35.69
HORVU3Hr1G109810.1	Barley	golgi, vacuole	49.6	35.24
HORVU7Hr1G028580.1	Barley	golgi, vacuole	49.19	34.66
HORVU5Hr1G091230.1	Barley	golgi, mitochondrion, plastid, vacuole	49.6	34.55
VIT_10s0042g00010.t01	Wine grape	vacuole	43.55	34.29
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	31.85	33.62
VIT_00s0575g00010.t01	Wine grape	vacuole	41.94	33.33
VIT_10s0042g00020.t01	Wine grape	vacuole	42.74	32.92
GSMUA_Achr5P05340_001	Banana	vacuole	47.18	32.59
KRH63133	Soybean	peroxisome, vacuole	22.58	32.37
VIT_00s0575g00020.t01	Wine grape	vacuole	41.94	32.3
VIT_10s0042g00050.t01	Wine grape	vacuole	41.94	32.3
VIT_10s0071g00020.t01	Wine grape	vacuole	39.92	32.04
VIT_10s0071g00010.t01	Wine grape	vacuole	41.53	31.99
VIT_13s0074g00080.t01	Wine grape	vacuole	41.53	31.99
HORVU3Hr1G074780.3	Barley	cytosol, vacuole	47.98	31.82
VIT_13s0074g00070.t01	Wine grape	vacuole	34.27	31.02
HORVU5Hr1G114720.1	Barley	plastid	22.98	30.0
HORVU5Hr1G078340.1	Barley	golgi, vacuole	29.44	29.92
PGSC0003DMT400056839	Potato	vacuole	37.5	29.81
KRH07462	Soybean	vacuole	41.13	29.39
VIT_10s0071g00250.t01	Wine grape	vacuole	39.92	29.12
KRH45407	Soybean	nucleus	40.32	28.65
VIT_17s0000g04600.t01	Wine grape	vacuole	39.11	28.28
VIT_10s0042g00030.t01	Wine grape	vacuole	31.05	28.21
Solyc12g039070.1.1	Tomato	nucleus	37.5	27.93
AT1G74010.1	Thale cress	vacuole	35.48	27.08
HORVU5Hr1G095260.1	Barley	extracellular	43.15	26.82
Bra003820.1-P	Field mustard	vacuole	34.68	26.63
PGSC0003DMT400063277	Potato	vacuole	35.48	26.51
PGSC0003DMT400063274	Potato	vacuole	35.89	26.49
Solyc03g114560.2.1	Tomato	extracellular	34.68	26.3
Bra008127.1-P	Field mustard	vacuole	34.68	26.22
CDY45861	Canola	vacuole	34.68	26.06
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	29.03	25.99
Solyc03g114530.2.1	Tomato	vacuole	34.68	25.9
CDX73039	Canola	vacuole	33.87	25.77
Bra015943.1-P	Field mustard	vacuole	33.87	25.77
CDX96507	Canola	vacuole	33.87	25.77
PGSC0003DMT400063286	Potato	vacuole	34.68	25.75
CDX73037	Canola	vacuole	33.87	25.61
Solyc03g114540.1.1	Tomato	vacuole	34.68	25.6
Solyc03g114550.1.1	Tomato	vacuole	28.23	25.55
KRH54773	Soybean	vacuole	34.68	25.52
Bra008126.1-P	Field mustard	vacuole	33.47	25.38
CDY47728	Canola	vacuole	33.47	25.38
AT1G74020.1	Thale cress	vacuole	34.27	25.37
CDY66188	Canola	vacuole	33.47	25.3
CDX96505	Canola	vacuole	33.47	25.3
HORVU5Hr1G043200.4	Barley	vacuole	37.9	25.13
CDX68204	Canola	vacuole	33.06	25.0
AT1G74000.1	Thale cress	vacuole	33.06	24.92
CDX96506	Canola	vacuole	32.66	24.92
CDX73038	Canola	vacuole	32.66	24.92
CDY47729	Canola	vacuole	32.26	24.62
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	17.74	24.31
Bra008124.1-P	Field mustard	vacuole	31.85	24.31
HORVU4Hr1G061230.2	Barley	peroxisome, vacuole	41.94	24.3
HORVU5Hr1G114800.1	Barley	extracellular	20.97	24.19
CDY66189	Canola	vacuole	28.63	23.91
CDY45863	Canola	vacuole	31.05	23.69
KRH03206	Soybean	vacuole	31.85	23.51
VIT_17s0000g04610.t01	Wine grape	vacuole	34.68	23.43
KRH56734	Soybean	vacuole	31.45	22.81
PGSC0003DMT400063282	Potato	extracellular, vacuole	13.31	21.29
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	37.1	20.31
HORVU1Hr1G052450.8	Barley	extracellular, golgi, vacuole	27.82	18.75
HORVU7Hr1G019170.1	Barley	cytosol	10.08	14.53
Bra015944.1-P	Field mustard	vacuole	32.26	13.4
HORVU4Hr1G016850.1	Barley	cytosol	8.47	12.07
HORVU6Hr1G025030.1	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU6Hr1G026020.1	EnsemblPlantsGene:HORVU6Hr1G026020	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF56	PFAM:PF03088	SUPFAM:SSF63829	UniParc:UPI000B47CD08
UniProt:A0A287TMP1	MapMan:50.4.3	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:96321161..96322304

Molecular Weight (calculated)

26939.8 Da

IEP (calculated)

5.891

GRAVY (calculated)

-0.283

Length

248 amino acids

Sequence
(BLAST)

001: MRTVPVAPSH DTEGLCGRPL GLAFHRKSGD LYIADAYKGL MRVGPDGGEA EVLATSADGV PFNFVNGIDI DQATGDVYFT DSSVTYPRRF NTEIMMNADA
101: TGRLLKYDAG TKQVTVFRDG LPYPNGVAVS HNRTYVVVAH TVPCQAHRYY LEGPNAGRYE LLADLPGYPH NVRRDEKRGY WVALNQENGR PGATTAPVTH
201: LVGVRLDGSG VEVEELTAAK GVTLSEVNER KGQLWLGSVE LDYIGLVA

Best Arabidopsis Sequence Match ( AT2G41290.1 )
(BLAST)

001: MMKLLLVVAT SVALIFSVTD LSGEGPKHGG ESMLTVQIPD FRLIPTTGAL GPESFVFDFF GDGPYTGLSD GRIVKWLANE SRWIDFAVTT SAREGCEGPH
101: EHQRTEHVCG RPLGLAFDKS TGDLYIADAY MGLLKVGPTG GVATQVLPRE LNEALRFTNS LDINPRTGVV YFTDSSSVYQ RRNYIGAMMS GDKTGRLMKY
201: DNTKQVTTLL SNLAFVNGVA LSQNGDYLLV VETAMCRILR YWLNETSVKS QSHDNYEIFA EGLPGFPDNI KRSPRGGFWV GLNTKHSKLT KFAMSNAWLG
301: RAALGLPVDW MKVHSVWARY NGNGMAVRLS EDSGVILEVF EGKNENKWIS ISEVEEKDGT LWVGSVNTPF AGMYKI

Arabidopsis Description

SSL2Protein STRICTOSIDINE SYNTHASE-LIKE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLG8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.