Factsheet for HORVU4Hr1G061230.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole

Predictor Summary:

vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome, vacuole
Any Predictor:	vacuole
MultiLoc:	vacuole
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G089000.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	93.93	97.34
TraesCS4D01G215800.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	93.46	96.85
TraesCS4B01G215300.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	93.22	96.61
Os03t0263600-01	Rice	cytosol, golgi, mitochondrion, vacuole	81.07	81.26
EER92507	Sorghum	cytosol, golgi, mitochondrion, vacuole	78.04	81.07
Zm00001d047858_P001	Maize	endoplasmic reticulum, golgi, mitochondrion, vacuole	77.34	80.34
VIT_05s0102g00880.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	62.15	65.52
Bra007457.1-P	Field mustard	golgi, vacuole	63.08	65.38
CDX71901	Canola	extracellular, golgi, vacuole	61.45	65.26
KRH10120	Soybean	endoplasmic reticulum	62.38	65.12
CDY05993	Canola	endoplasmic reticulum, golgi, vacuole	61.22	65.01
KRH23218	Soybean	golgi, vacuole	61.92	64.63
AT3G59530.3	Thale cress	golgi, vacuole	60.75	64.52
CDX89027	Canola	endoplasmic reticulum, vacuole	60.75	64.36
Bra014536.1-P	Field mustard	vacuole	62.15	64.25
PGSC0003DMT400030927	Potato	golgi, plasma membrane, vacuole	59.35	62.41
Solyc03g053130.2.1	Tomato	extracellular	60.05	62.08
GSMUA_Achr11P...	Banana	golgi, vacuole	51.4	57.29
HORVU2Hr1G013460.2	Barley	golgi, mitochondrion, vacuole	28.97	42.61
HORVU6Hr1G026020.1	Barley	cytosol	24.3	41.94
HORVU5Hr1G114800.1	Barley	extracellular	20.79	41.4
HORVU5Hr1G095260.1	Barley	extracellular	38.32	41.1
HORVU5Hr1G114720.1	Barley	plastid	18.22	41.05
HORVU5Hr1G093840.1	Barley	vacuole	32.24	40.71
HORVU3Hr1G065520.3	Barley	extracellular	30.61	40.68
HORVU2Hr1G012970.2	Barley	mitochondrion	33.18	40.57
HORVU5Hr1G058910.2	Barley	endoplasmic reticulum, extracellular, vacuole	31.31	38.73
HORVU2Hr1G064060.1	Barley	mitochondrion, vacuole	22.9	38.58
HORVU5Hr1G091230.1	Barley	golgi, mitochondrion, plastid, vacuole	30.84	37.08
HORVU5Hr1G058940.2	Barley	vacuole	31.54	36.78
HORVU7Hr1G028580.1	Barley	golgi, vacuole	29.67	36.08
HORVU5Hr1G043200.4	Barley	vacuole	31.07	35.56
HORVU7Hr1G019170.1	Barley	cytosol	14.25	35.47
HORVU7Hr1G028550.2	Barley	plastid	14.72	35.39
HORVU5Hr1G009400.2	Barley	cytosol, mitochondrion, plastid, vacuole	11.21	35.29
HORVU3Hr1G109810.1	Barley	golgi, vacuole	28.27	34.67
HORVU4Hr1G016850.1	Barley	cytosol	13.79	33.91
HORVU5Hr1G078340.1	Barley	golgi, vacuole	18.69	32.79
HORVU3Hr1G074780.3	Barley	cytosol, vacuole	28.5	32.62
HORVU6Hr1G025030.1	Barley	cytosol	7.71	29.73
HORVU1Hr1G052450.8	Barley	extracellular, golgi, vacuole	23.13	26.9

Protein Annotations

Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	UniProt:A0A287PA99	GO:GO:0003674	GO:GO:0003824
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009555	GO:GO:0009653
GO:GO:0009987	GO:GO:0010584	GO:GO:0016043	GO:GO:0016844	EnsemblPlantsGene:HORVU4Hr1G061230	EnsemblPlants:HORVU4Hr1G061230.2
InterPro:IPR011042	PFAM:PF03088	PANTHER:PTHR10426	PANTHER:PTHR10426:SF21	SUPFAM:SSF63829	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	UniParc:UPI000B46184B	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:514624063..514625778

Molecular Weight (calculated)

48070.9 Da

IEP (calculated)

7.095

GRAVY (calculated)

-0.272

Length

428 amino acids

Sequence
(BLAST)

001: FFPSACKPEP LPSTSMEEKK PRRQGAAGRD GIVQYPHLFI AALALALVLM DPFHLGPLAG IDYRPVKHEL APYREVMQRW PRDNGSRLRL GRLEFVNEVF
101: GPESIEFDRQ GRGPYAGLAD GRVVRWMGDM TGWETFAVMN PDWSEKVCAN GVESTTKKQH GKEKWCGRPL GLRFHRETGE LFIADAYYGL MAVGDSGGVA
201: TSLAREAGGD PVHFANDLDI HMNGSIFFTD TSTRYSRKDH LNILLEGEGT GRLLRYDPET GAVHVVLSGL VFPNGVQISQ DQQFLLFSET TNCRIMRYWL
301: EGPKAGQVEV FANLPGFPDN VRMNSKGQFW VAIDCCRTPM QEVFARRPWL RSAYFKIPVS MKTLGKMVSM KMYTLLALLD GEGNVVEVLE DRGGEVMKLV
401: SEVREVDRRL WIGTVAHNHI ATLPYPLD

Best Arabidopsis Sequence Match ( AT3G59530.1 )
(BLAST)

001: MEKKGQHGTY ESMMTHHPIL CIIALSVLFI AIDPFHMSPI GGREFKPVKH EVAPYKEVMG SWPRDNLSRL GNHGKLEFVD QVFGPESLEF DSLGRGPYTG
101: LADGRVVRWM GEAIGWETFS VVTSKWSEEA CVRGVDSTTN KQWKHEKLCG RPLGLRFHKE TGNLYIADAY YGLLVVGPEG GIATPLATHV EGKPILFAND
201: LDIHRNGSIF FTDTSKRYDR ANHFFILLEG ESTGRLLRYD PPTKTTHIVL EGLAFPNGIQ LSKDQSFLLF TETTNCRLVK YWLEGPKMGE VEVVADLPGF
301: PDNVRINEEG QFWVAIDCCR TPAQEVLTNN PWIRSIYFRL PIPMKLLAKT MGMRMYTVIS RFDEEGKVLE VLEDRQGKVM KLWIGTVAHN HIATLPYPLT
401: MNQ

Arabidopsis Description

SSL13Protein STRICTOSIDINE SYNTHASE-LIKE 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1B4]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.