Subcellular Localization
min:
: max
Winner_takes_all: golgi, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 4
- mitochondrion 1
- extracellular 2
- golgi 3
- plasma membrane 2
- endoplasmic reticulum 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_05s0102g00880.t01 | Wine grape | endoplasmic reticulum, extracellular, golgi | 57.81 | 54.68 |
| TraesCS4B01G215300.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, vacuole | 57.55 | 53.51 |
| CDX71901 | Canola | extracellular, golgi, vacuole | 55.99 | 53.35 |
| TraesCS4D01G215800.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, vacuole | 57.29 | 53.27 |
| TraesCS4A01G089000.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, vacuole | 57.29 | 53.27 |
| Bra007457.1-P | Field mustard | golgi, vacuole | 57.03 | 53.03 |
| CDX89027 | Canola | endoplasmic reticulum, vacuole | 55.73 | 52.97 |
| CDY05993 | Canola | endoplasmic reticulum, golgi, vacuole | 55.47 | 52.85 |
| KRH23218 | Soybean | golgi, vacuole | 55.99 | 52.44 |
| KRH10120 | Soybean | endoplasmic reticulum | 55.73 | 52.2 |
| AT3G59530.3 | Thale cress | golgi, vacuole | 54.69 | 52.11 |
| Bra014536.1-P | Field mustard | vacuole | 55.73 | 51.69 |
| HORVU4Hr1G061230.2 | Barley | peroxisome, vacuole | 57.29 | 51.4 |
| Os03t0263600-01 | Rice | cytosol, golgi, mitochondrion, vacuole | 55.73 | 50.12 |
| PGSC0003DMT400030927 | Potato | golgi, plasma membrane, vacuole | 52.08 | 49.14 |
| Zm00001d047858_P001 | Maize | endoplasmic reticulum, golgi, mitochondrion, vacuole | 52.08 | 48.54 |
| EER92507 | Sorghum | cytosol, golgi, mitochondrion, vacuole | 51.82 | 48.3 |
| Solyc03g053130.2.1 | Tomato | extracellular | 51.56 | 47.83 |
| GSMUA_Achr3P30810_001 | Banana | endoplasmic reticulum, vacuole | 33.85 | 33.42 |
| GSMUA_Achr3P06240_001 | Banana | cytosol, mitochondrion, peroxisome, vacuole | 26.82 | 33.23 |
| GSMUA_Achr5P05340_001 | Banana | vacuole | 29.69 | 31.75 |
| GSMUA_Achr8P04740_001 | Banana | endoplasmic reticulum, golgi, vacuole | 33.85 | 31.33 |
| GSMUA_AchrUn_... | Banana | plastid | 17.19 | 26.4 |
| GSMUA_Achr11P... | Banana | golgi, vacuole | 22.14 | 23.68 |
Protein Annotations
| Gene3D:2.120.10.30 | MapMan:50.4.3 | InterPro:6-blade_b-propeller_TolB-like | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009555 | GO:GO:0009653 |
| GO:GO:0009987 | GO:GO:0010584 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0016844 |
| EnsemblPlantsGene:GSMUA_Achr11G22220_001 | EnsemblPlants:GSMUA_Achr11P22220_001 | EnsemblPlants:GSMUA_Achr11T22220_001 | InterPro:IPR011042 | UniProt:M0RUF2 | PFAM:PF03088 |
| PANTHER:PTHR10426 | PANTHER:PTHR10426:SF21 | SUPFAM:SSF63829 | InterPro:Strictosidine_synth_cons-reg | InterPro:Strictosidine_synthase | TMHMM:TMhelix |
| UniParc:UPI000296B1AE | SEG:seg | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G22220_001]
Coordinates
chr11:-:22552445..22553814
Molecular Weight (calculated)
42525.6 Da
IEP (calculated)
9.390
GRAVY (calculated)
-0.515
Length
384 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKKGLRKED GLLPRPWLSL LALAFGLVFM DPFHLGPLGG HDYRPVKHNI APYDQVMQRW PRDCRSRLRF GKLEFVDEVF GPESLEFDPQ GRGPYAGLAD
101: GRVVRWMGES IRWKTFALVS PNWSEKVCAN GVESTTAKQH KHEKLCGRPL GLRFDKTSGK LYIADAYLGL AAVGHHGGVA TLLSTHVQGR PVLFANDLDV
201: HRNGSIFFTD TSSRYSRSDH FFILLEGEAT GRLLRYDPAS GATHVVLRGL AFPNGVQLSK DQTFLLFTET TNCRQDNEAL DGRTQSWQVG GVCGLARVPG
301: QHKDHGEGAV LGGDRLLPHA GAGGLLPQSM AEKRILQTAA EAELPRRDDG DEDVHHDLAL RRGGQRRRGA RGQRRRGDEA GQRS
101: GRVVRWMGES IRWKTFALVS PNWSEKVCAN GVESTTAKQH KHEKLCGRPL GLRFDKTSGK LYIADAYLGL AAVGHHGGVA TLLSTHVQGR PVLFANDLDV
201: HRNGSIFFTD TSSRYSRSDH FFILLEGEAT GRLLRYDPAS GATHVVLRGL AFPNGVQLSK DQTFLLFTET TNCRQDNEAL DGRTQSWQVG GVCGLARVPG
301: QHKDHGEGAV LGGDRLLPHA GAGGLLPQSM AEKRILQTAA EAELPRRDDG DEDVHHDLAL RRGGQRRRGA RGQRRRGDEA GQRS
001: MEKKGQHGTY ESMMTHHPIL CIIALSVLFI AIDPFHMSPI GGREFKPVKH EVAPYKEVMG SWPRDNLSRL GNHGKLEFVD QVFGPESLEF DSLGRGPYTG
101: LADGRVVRWM GEAIGWETFS VVTSKWSEEA CVRGVDSTTN KQWKHEKLCG RPLGLRFHKE TGNLYIADAY YGLLVVGPEG GIATPLATHV EGKPILFAND
201: LDIHRNGSIF FTDTSKRYDR ANHFFILLEG ESTGRLLRYD PPTKTTHIVL EGLAFPNGIQ LSKDQSFLLF TETTNCRLVK YWLEGPKMGE VEVVADLPGF
301: PDNVRINEEG QFWVAIDCCR TPAQEVLTNN PWIRSIYFRL PIPMKLLAKT MGMRMYTVIS RFDEEGKVLE VLEDRQGKVM KLWIGTVAHN HIATLPYPLT
401: MNQ
101: LADGRVVRWM GEAIGWETFS VVTSKWSEEA CVRGVDSTTN KQWKHEKLCG RPLGLRFHKE TGNLYIADAY YGLLVVGPEG GIATPLATHV EGKPILFAND
201: LDIHRNGSIF FTDTSKRYDR ANHFFILLEG ESTGRLLRYD PPTKTTHIVL EGLAFPNGIQ LSKDQSFLLF TETTNCRLVK YWLEGPKMGE VEVVADLPGF
301: PDNVRINEEG QFWVAIDCCR TPAQEVLTNN PWIRSIYFRL PIPMKLLAKT MGMRMYTVIS RFDEEGKVLE VLEDRQGKVM KLWIGTVAHN HIATLPYPLT
401: MNQ
Arabidopsis Description
SSL13Protein STRICTOSIDINE SYNTHASE-LIKE 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1B4]
SUBAcon: [extracellular,golgi,vacuole]
SUBAcon: [extracellular,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.