Subcellular Localization
min:
: max
Winner_takes_all: golgi, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- vacuole 4
- extracellular 2
- endoplasmic reticulum 2
- plasma membrane 2
- golgi 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89027 | Canola | endoplasmic reticulum, vacuole | 91.07 | 90.84 |
| CDX71901 | Canola | extracellular, golgi, vacuole | 89.58 | 89.58 |
| CDY05993 | Canola | endoplasmic reticulum, golgi, vacuole | 89.33 | 89.33 |
| Bra014536.1-P | Field mustard | vacuole | 91.56 | 89.13 |
| Bra007457.1-P | Field mustard | golgi, vacuole | 88.83 | 86.68 |
| VIT_05s0102g00880.t01 | Wine grape | endoplasmic reticulum, extracellular, golgi | 75.19 | 74.63 |
| KRH10120 | Soybean | endoplasmic reticulum | 73.95 | 72.68 |
| KRH23218 | Soybean | golgi, vacuole | 73.7 | 72.44 |
| PGSC0003DMT400030927 | Potato | golgi, plasma membrane, vacuole | 68.73 | 68.06 |
| Solyc03g053130.2.1 | Tomato | extracellular | 68.98 | 67.15 |
| TraesCS4B01G215300.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, vacuole | 64.02 | 62.47 |
| TraesCS4D01G215800.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, vacuole | 63.52 | 61.99 |
| TraesCS4A01G089000.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, vacuole | 63.52 | 61.99 |
| Zm00001d047858_P001 | Maize | endoplasmic reticulum, golgi, mitochondrion, vacuole | 62.78 | 61.41 |
| EER92507 | Sorghum | cytosol, golgi, mitochondrion, vacuole | 62.78 | 61.41 |
| HORVU4Hr1G061230.2 | Barley | peroxisome, vacuole | 64.52 | 60.75 |
| Os03t0263600-01 | Rice | cytosol, golgi, mitochondrion, vacuole | 64.02 | 60.42 |
| GSMUA_Achr11P... | Banana | golgi, vacuole | 52.11 | 54.69 |
| AT5G22020.2 | Thale cress | vacuole | 41.94 | 42.78 |
| AT3G57030.1 | Thale cress | endoplasmic reticulum, extracellular, golgi | 38.46 | 41.44 |
| AT1G08470.1 | Thale cress | endoplasmic reticulum, vacuole | 39.95 | 41.28 |
| AT3G57010.1 | Thale cress | extracellular, golgi, vacuole | 31.27 | 33.51 |
| AT2G41290.1 | Thale cress | vacuole | 31.27 | 33.51 |
| AT3G57020.1 | Thale cress | vacuole | 30.27 | 32.97 |
| AT1G74010.1 | Thale cress | vacuole | 24.81 | 30.77 |
| AT2G41300.1 | Thale cress | vacuole | 29.28 | 29.95 |
| AT1G74020.1 | Thale cress | vacuole | 23.57 | 28.36 |
| AT1G74000.1 | Thale cress | vacuole | 22.83 | 27.96 |
| AT3G51440.1 | Thale cress | golgi, vacuole | 23.57 | 25.61 |
| AT3G51450.1 | Thale cress | vacuole | 22.83 | 24.8 |
| AT3G51430.1 | Thale cress | golgi, vacuole | 22.83 | 24.8 |
| AT3G51420.1 | Thale cress | golgi, vacuole | 21.84 | 23.78 |
Protein Annotations
| Gene3D:2.120.10.30 | MapMan:50.4.3 | InterPro:6-blade_b-propeller_TolB-like | EntrezGene:825122 | ProteinID:AEE79936.1 | ProteinID:AEE79937.1 |
| ProteinID:ANM63538.1 | ArrayExpress:AT3G59530 | EnsemblPlantsGene:AT3G59530 | RefSeq:AT3G59530 | TAIR:AT3G59530 | RefSeq:AT3G59530-TAIR-G |
| EnsemblPlants:AT3G59530.3 | EMBL:BT004209 | EMBL:BT005675 | ProteinID:CAB75450.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005783 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009555 | GO:GO:0009653 |
| GO:GO:0009987 | GO:GO:0010584 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0016788 |
| GO:GO:0016844 | InterPro:IPR011042 | Symbol:LAP3 | RefSeq:NP_001325620.1 | RefSeq:NP_191512.1 | RefSeq:NP_974462.1 |
| PFAM:PF03088 | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF21 | UniProt:Q9M1B4 | SUPFAM:SSF63829 | InterPro:Strictosidine_synth_cons-reg |
| InterPro:Strictosidine_synthase | TMHMM:TMhelix | UniParc:UPI00000A6A5C | : | : | : |
Description
SSL13Protein STRICTOSIDINE SYNTHASE-LIKE 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1B4]
Coordinates
chr3:+:21993489..21995308
Molecular Weight (calculated)
45631.1 Da
IEP (calculated)
6.883
GRAVY (calculated)
-0.227
Length
403 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKKGQHGTY ESMMTHHPIL CIIALSVLFI AIDPFHMSPI GGREFKPVKH EVAPYKEVMG SWPRDNLSRL GNHGKLEFVD QVFGPESLEF DSLGRGPYTG
101: LADGRVVRWM GEAIGWETFS VVTSKWSEEA CVRGVDSTTN KQWKHEKLCG RPLGLRFHKE TGNLYIADAY YGLLVVGPEG GIATPLATHV EGKPILFAND
201: LDIHRNGSIF FTDTSKRYDR ANHFFILLEG ESTGRLLRYD PPTKTTHIVL EGLAFPNGIQ LSKDQSFLLF TETTNCRLVK YWLEGPKMGE VEVVADLPGF
301: PDNVRINEEG QFWVAIDCCR TPAQEVLTNN PWIRSIYFRL PIPMKLLAKT MGMRMYTVIS RFDEEGKVLE VLEDRQGKVM KLWIGTVAHN HIATLPYPLT
401: MNQ
101: LADGRVVRWM GEAIGWETFS VVTSKWSEEA CVRGVDSTTN KQWKHEKLCG RPLGLRFHKE TGNLYIADAY YGLLVVGPEG GIATPLATHV EGKPILFAND
201: LDIHRNGSIF FTDTSKRYDR ANHFFILLEG ESTGRLLRYD PPTKTTHIVL EGLAFPNGIQ LSKDQSFLLF TETTNCRLVK YWLEGPKMGE VEVVADLPGF
301: PDNVRINEEG QFWVAIDCCR TPAQEVLTNN PWIRSIYFRL PIPMKLLAKT MGMRMYTVIS RFDEEGKVLE VLEDRQGKVM KLWIGTVAHN HIATLPYPLT
401: MNQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.