Factsheet for AT3G57010.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:

plastid 1
extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76030	Canola	endoplasmic reticulum, golgi, vacuole	81.12	81.12
CDY30962	Canola	vacuole	80.59	80.59
Bra014655.1-P	Field mustard	endoplasmic reticulum, golgi	81.12	80.05
CDX76033	Canola	vacuole	79.79	79.79
CDY30963	Canola	vacuole	79.26	79.26
CDY47397	Canola	vacuole	56.65	72.95
AT3G57020.1	Thale cress	vacuole	68.88	70.0
AT2G41300.1	Thale cress	vacuole	60.64	57.87
AT3G57030.1	Thale cress	endoplasmic reticulum, extracellular, golgi	46.28	46.52
KRH66809	Soybean	endoplasmic reticulum	43.35	43.94
KRG95135	Soybean	endoplasmic reticulum	43.35	43.94
AT1G08470.1	Thale cress	endoplasmic reticulum, vacuole	43.35	41.79
AT5G22020.2	Thale cress	vacuole	41.22	39.24
AT2G41290.1	Thale cress	vacuole	35.11	35.11
AT1G74000.1	Thale cress	vacuole	28.19	32.22
AT1G74010.1	Thale cress	vacuole	27.66	32.0
AT3G59530.3	Thale cress	golgi, vacuole	33.51	31.27
AT1G74020.1	Thale cress	vacuole	27.39	30.75
AT3G51450.1	Thale cress	vacuole	19.68	19.95
AT3G51430.1	Thale cress	golgi, vacuole	19.41	19.68
AT3G51420.1	Thale cress	golgi, vacuole	18.88	19.19
AT3G51440.1	Thale cress	golgi, vacuole	18.88	19.14

Protein Annotations

Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	EntrezGene:824868	UniProt:A0A178VJ69	ProteinID:AEE79598.1
EMBL:AF370181	EMBL:AJ271473	ArrayExpress:AT3G57010	EnsemblPlantsGene:AT3G57010	RefSeq:AT3G57010	TAIR:AT3G57010
RefSeq:AT3G57010-TAIR-G	EnsemblPlants:AT3G57010.1	TAIR:AT3G57010.1	EMBL:AY142495	Unigene:At.25199	ProteinID:CAB72171.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005783	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016788	GO:GO:0016844	InterPro:IPR011042	RefSeq:NP_191260.1
ProteinID:OAP05083.1	PFAM:PF03088	PO:PO:0000037	PO:PO:0000293	PO:PO:0005052	PO:PO:0007611
PO:PO:0007616	PO:PO:0009005	PO:PO:0009029	PO:PO:0009030	PO:PO:0009046	PO:PO:0020100
PO:PO:0025022	PO:PO:0025281	PANTHER:PTHR10426	PANTHER:PTHR10426:SF24	UniProt:Q9M1J7	SUPFAM:SSF63829
InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	TMHMM:TMhelix	UniParc:UPI00000AC34D	:	:

Description

SSL8Protein STRICTOSIDINE SYNTHASE-LIKE 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1J7]

Coordinates

chr3:-:21095600..21097481

Molecular Weight (calculated)

41982.3 Da

IEP (calculated)

6.062

GRAVY (calculated)

-0.164

Length

376 amino acids

Sequence
(BLAST)

001: MPISRRVLTP ITAAPVILAV LCFFFWSSII GPDNLKGTKH VLQDAKTIPL PVDGPESLEF DPQGEGPYVG VTDGRILKWR GEELGWVDFA YTSPHRDNCS
101: SHEVVPSCGR PLGLSFERKT GDLYICDGYF GVMKVGPEGG LAELVVDEAE GRKVMFANQG DIDEEEDIFY FNDSSDTYHF RDVFYVSLSG TKVGRVIRYD
201: MKKKEAKVIM DKLRLPNGLA LSKNGSFVVT CESSTNICHR IWVKGPKSGT NEVFATLPGS PDNIRRTPTG DFWVALHCKK NLFTRAVLIH TWVGRFFMNT
301: MKMETVIHFM NGGKPHGIVV KLSGETGEIL EILEDSEGKT VKYVSEAYET KDGKLWIGSV YWPAVWVLDT SVYDSI

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.