Subcellular Localization
min:
: max
Winner_takes_all: golgi, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 6
- extracellular 5
- vacuole 5
- plasma membrane 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G51440.1 | Thale cress | golgi, vacuole | 82.21 | 82.21 |
| AT3G51450.1 | Thale cress | vacuole | 80.05 | 80.05 |
| CDX73720 | Canola | golgi, vacuole | 78.17 | 77.96 |
| CDY33279 | Canola | golgi, vacuole | 77.9 | 77.9 |
| Bra038899.1-P | Field mustard | golgi, vacuole | 77.63 | 77.63 |
| AT3G51420.1 | Thale cress | golgi, vacuole | 77.36 | 77.57 |
| CDY16307 | Canola | golgi, vacuole | 77.09 | 77.3 |
| CDY33280 | Canola | golgi, vacuole | 77.09 | 77.3 |
| CDY16306 | Canola | golgi, vacuole | 73.32 | 76.19 |
| Bra038898.1-P | Field mustard | golgi, vacuole | 74.39 | 69.52 |
| Bra036798.1-P | Field mustard | vacuole | 76.55 | 68.6 |
| CDX78005 | Canola | vacuole | 75.74 | 67.87 |
| VIT_04s0210g00060.t01 | Wine grape | cytosol, mitochondrion | 40.97 | 56.51 |
| VIT_04s0210g00100.t01 | Wine grape | cytosol | 25.61 | 54.29 |
| VIT_04s0210g00120.t01 | Wine grape | vacuole | 53.91 | 52.77 |
| VIT_04s0210g00080.t01 | Wine grape | vacuole | 53.64 | 52.51 |
| PGSC0003DMT400003995 | Potato | golgi, vacuole | 52.83 | 52.41 |
| Solyc02g082900.2.1 | Tomato | vacuole | 51.48 | 51.48 |
| Os10t0543500-01 | Rice | plasma membrane | 35.31 | 51.37 |
| VIT_04s0210g00090.t01 | Wine grape | mitochondrion, vacuole | 26.42 | 50.0 |
| VIT_04s0210g00130.t01 | Wine grape | plasma membrane, vacuole | 38.54 | 50.0 |
| TraesCS1A01G203800.1 | Wheat | cytosol, plastid, vacuole | 32.61 | 49.59 |
| KRH69688 | Soybean | golgi, vacuole | 48.79 | 49.32 |
| VIT_04s0210g00050.t01 | Wine grape | plastid | 54.72 | 48.68 |
| HORVU1Hr1G052450.8 | Barley | extracellular, golgi, vacuole | 46.9 | 47.28 |
| TraesCS1B01G217600.1 | Wheat | extracellular, golgi, vacuole | 46.63 | 47.14 |
| KRH07935 | Soybean | endoplasmic reticulum | 47.98 | 47.09 |
| TraesCS1D01G207200.2 | Wheat | extracellular, golgi, vacuole | 46.09 | 46.59 |
| GSMUA_AchrUn_... | Banana | plastid | 29.92 | 44.4 |
| KRH69689 | Soybean | plastid | 44.47 | 41.67 |
| OQU92210 | Sorghum | golgi, plastid, vacuole | 48.25 | 40.41 |
| VIT_04s0210g00040.t01 | Wine grape | cytosol, peroxisome, vacuole | 35.58 | 35.2 |
| VIT_04s0210g00030.t01 | Wine grape | vacuole | 52.56 | 25.23 |
| AT1G08470.1 | Thale cress | endoplasmic reticulum, vacuole | 25.61 | 24.36 |
| AT3G57030.1 | Thale cress | endoplasmic reticulum, extracellular, golgi | 24.53 | 24.33 |
| AT5G22020.2 | Thale cress | vacuole | 25.61 | 24.05 |
| AT1G74010.1 | Thale cress | vacuole | 21.02 | 24.0 |
| AT1G74020.1 | Thale cress | vacuole | 21.02 | 23.28 |
| AT3G59530.3 | Thale cress | golgi, vacuole | 24.8 | 22.83 |
| AT2G41290.1 | Thale cress | vacuole | 22.64 | 22.34 |
| AT3G57020.1 | Thale cress | vacuole | 22.1 | 22.16 |
| AT1G74000.1 | Thale cress | vacuole | 19.14 | 21.58 |
| AT2G41300.1 | Thale cress | vacuole | 20.75 | 19.54 |
| AT3G57010.1 | Thale cress | extracellular, golgi, vacuole | 19.68 | 19.41 |
Protein Annotations
| Gene3D:2.120.10.30 | MapMan:50.4.3 | InterPro:6-blade_b-propeller_TolB-like | EntrezGene:824306 | UniProt:A0A178VMI5 | EMBL:AB047805 |
| ProteinID:AEE78791.1 | EMBL:AF462858 | ArrayExpress:AT3G51430 | EnsemblPlantsGene:AT3G51430 | RefSeq:AT3G51430 | TAIR:AT3G51430 |
| RefSeq:AT3G51430-TAIR-G | EnsemblPlants:AT3G51430.1 | TAIR:AT3G51430.1 | EMBL:AY065039 | EMBL:AY087326 | EMBL:BT010753 |
| ProteinID:CAB63007.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005783 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009615 | GO:GO:0009620 | GO:GO:0009719 | GO:GO:0009723 |
| GO:GO:0009751 | GO:GO:0009753 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016788 | GO:GO:0016844 |
| InterPro:IPR011042 | RefSeq:NP_566951.1 | ProteinID:OAP06661.1 | PFAM:PF03088 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR10426 |
| PANTHER:PTHR10426:SF58 | UniProt:Q9CAZ7 | SUPFAM:SSF63829 | SignalP:SignalP-noTM | InterPro:Strictosidine_synth_cons-reg | InterPro:Strictosidine_synthase |
| TMHMM:TMhelix | UniParc:UPI000009CD4C | Symbol:YLS2 | : | : | : |
Description
SSL5Protein STRICTOSIDINE SYNTHASE-LIKE 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAZ7]
Coordinates
chr3:+:19086344..19088150
Molecular Weight (calculated)
41644.2 Da
IEP (calculated)
6.676
GRAVY (calculated)
-0.020
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MPMFYSSRFL FFFTIVPLLV SIALYQLDTF DPAPVPSEAY ASSTTSIPPL ISDKYLTGAE FIGVGLLDKP EDIAYHQDSN LIYTGCIDGW VKRVSVHDSA
101: NDSVVEDWVN TGGRPLGIAF GVHGEVIVAD AYKGLLNISG DGKKTELLTD QAEGVKFKLT DVVAVADNGV LYFTDASYKY TLHQVKFDIL EGKPHGRLMS
201: FDPTTRVTRV LLKDLYFANG VSMSPDQTHL IFCETPMRRC SKYYINEERV EVFIQGLPGY PDNIRYDGDG HYWIAMVSGA STLWRLSMKY PFLRKITAIA
301: AKYGVELMFM KNAGVLQVDL DGNPIAYYHD QRLSHITTGI KIGNYLYCGN ILHSYIIRLD LLKYPAQKKK L
101: NDSVVEDWVN TGGRPLGIAF GVHGEVIVAD AYKGLLNISG DGKKTELLTD QAEGVKFKLT DVVAVADNGV LYFTDASYKY TLHQVKFDIL EGKPHGRLMS
201: FDPTTRVTRV LLKDLYFANG VSMSPDQTHL IFCETPMRRC SKYYINEERV EVFIQGLPGY PDNIRYDGDG HYWIAMVSGA STLWRLSMKY PFLRKITAIA
301: AKYGVELMFM KNAGVLQVDL DGNPIAYYHD QRLSHITTGI KIGNYLYCGN ILHSYIIRLD LLKYPAQKKK L
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.