Factsheet for Bra038898.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra012567.1-P
Bra013361.1-P
Bra027174.1-P
Bra030034.1-P
Bra032817.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G51450.1	Bra030034.1-P	AT1G27300.1	21798944
AT3G51450.1	Bra032817.1-P	AT1G27300.1	21798944
AT3G51450.1	Bra027174.1-P	AT3G16310.1	21798944
AT3G51450.1	Bra012567.1-P	AT4G19030.1	21798944
AT3G51450.1	Bra013361.1-P	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33280	Canola	golgi, vacuole	88.92	95.41
CDY16307	Canola	golgi, vacuole	87.91	94.32
Bra038899.1-P	Field mustard	golgi, vacuole	73.8	78.98
AT3G51440.1	Thale cress	golgi, vacuole	71.28	76.28
AT3G51430.1	Thale cress	golgi, vacuole	69.52	74.39
AT3G51450.1	Thale cress	vacuole	67.76	72.51
AT3G51420.1	Thale cress	golgi, vacuole	66.75	71.62
Bra036798.1-P	Field mustard	vacuole	69.77	66.91
VIT_04s0210g00060.t01	Wine grape	cytosol, mitochondrion	36.52	53.9
PGSC0003DMT400003995	Potato	golgi, vacuole	49.62	52.67
Solyc02g082900.2.1	Tomato	vacuole	47.86	51.21
VIT_04s0210g00120.t01	Wine grape	vacuole	47.61	49.87
VIT_04s0210g00100.t01	Wine grape	cytosol	21.91	49.71
VIT_04s0210g00080.t01	Wine grape	vacuole	47.36	49.6
Os10t0543500-01	Rice	plasma membrane	31.49	49.02
KRH69688	Soybean	golgi, vacuole	43.58	47.14
TraesCS1A01G203800.1	Wheat	cytosol, plastid, vacuole	28.97	47.13
VIT_04s0210g00090.t01	Wine grape	mitochondrion, vacuole	22.92	46.43
VIT_04s0210g00130.t01	Wine grape	plasma membrane, vacuole	33.25	46.15
VIT_04s0210g00050.t01	Wine grape	plastid	48.36	46.04
KRH07935	Soybean	endoplasmic reticulum	42.82	44.97
HORVU1Hr1G052450.8	Barley	extracellular, golgi, vacuole	41.56	44.84
TraesCS1B01G217600.1	Wheat	extracellular, golgi, vacuole	41.06	44.41
TraesCS1D01G207200.2	Wheat	extracellular, golgi, vacuole	40.81	44.14
GSMUA_AchrUn_...	Banana	plastid	26.95	42.8
KRH69689	Soybean	plastid	40.55	40.66
OQU92210	Sorghum	golgi, plastid, vacuole	43.07	38.6
VIT_04s0210g00040.t01	Wine grape	cytosol, peroxisome, vacuole	32.24	34.13
Bra018623.1-P	Field mustard	cytosol	24.43	27.64
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	15.37	25.96
Bra002383.1-P	Field mustard	vacuole	24.69	24.81
Bra007294.1-P	Field mustard	vacuole	23.17	24.6
VIT_04s0210g00030.t01	Wine grape	vacuole	47.86	24.58
Bra004613.1-P	Field mustard	vacuole	22.42	23.73
Bra008126.1-P	Field mustard	vacuole	19.14	23.24
Bra000222.1-P	Field mustard	cytosol	20.15	23.19
Bra008124.1-P	Field mustard	vacuole	18.64	22.77
Bra008127.1-P	Field mustard	vacuole	18.64	22.56
Bra007457.1-P	Field mustard	golgi, vacuole	23.43	22.52
Bra014536.1-P	Field mustard	vacuole	23.43	22.46
Bra000223.1-P	Field mustard	vacuole	20.65	22.22
Bra004614.1-P	Field mustard	vacuole	20.65	22.22
Bra015943.1-P	Field mustard	vacuole	18.14	22.09
Bra003820.1-P	Field mustard	vacuole	17.88	21.98
Bra007293.1-P	Field mustard	vacuole	19.14	20.6
Bra014652.1-P	Field mustard	extracellular, golgi, vacuole	19.14	20.54
Bra034344.1-P	Field mustard	vacuole	19.14	20.54
Bra003263.1-P	Field mustard	vacuole	18.64	20.0
Bra014655.1-P	Field mustard	endoplasmic reticulum, golgi	19.14	19.95
Bra015944.1-P	Field mustard	vacuole	17.88	11.89

Protein Annotations

Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	EnsemblPlantsGene:Bra038898	EnsemblPlants:Bra038898.1	EnsemblPlants:Bra038898.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0016020	GO:GO:0016021	GO:GO:0016844	InterPro:IPR011042	UniProt:M4FCS9	PFAM:PF03088
PANTHER:PTHR10426	PANTHER:PTHR10426:SF58	SUPFAM:SSF63829	InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	TMHMM:TMhelix
UniParc:UPI00025453B4	SEG:seg	:	:	:	:

Description

AT3G51440 (E=1e-097) | strictosidine synthase family protein

Coordinates

chrA01:-:12674551..12676540

Molecular Weight (calculated)

44767.8 Da

IEP (calculated)

7.140

GRAVY (calculated)

-0.061

Length

397 amino acids

Sequence
(BLAST)

001: MPLFFSLRFL LFSAIVALLA SIVLYRFDTF DPAPLPSDAL VYSTDSIPPL INNQFLTGAE FIGAGLLNSP EDIAYHRDSG LIYTGCVDGW VKRVKAFESA
101: NDSVVEDWVN TGGRPLGLAF GLHGEVIVAD AYKGEVMGSR LTNNLIMELE RTHNRGVGVG ALQRCEPRFL VRGWVVTDEA EGVKFKLTDA VAVRDNGVLY
201: FTDASYKYNL HHFAFDIWEG KPHGRLMSFD PITRTTRVLL RDRYFSNGVS MSPDQTHLVF CETPLRRCSK YYINEERVEV FIESLPGYPD NIRYDGDGHY
301: WIAMPSGVTT LWKLSFRYPF IRKLQALAAK YGFNTIMENA GVLQVDLDGK PIALYHDPKH SHVTSGVKIG KYLYCGSLLD SHILRLDLLK YPAQKRL

Best Arabidopsis Sequence Match ( AT3G51430.1 )
(BLAST)

001: MPMFYSSRFL FFFTIVPLLV SIALYQLDTF DPAPVPSEAY ASSTTSIPPL ISDKYLTGAE FIGVGLLDKP EDIAYHQDSN LIYTGCIDGW VKRVSVHDSA
101: NDSVVEDWVN TGGRPLGIAF GVHGEVIVAD AYKGLLNISG DGKKTELLTD QAEGVKFKLT DVVAVADNGV LYFTDASYKY TLHQVKFDIL EGKPHGRLMS
201: FDPTTRVTRV LLKDLYFANG VSMSPDQTHL IFCETPMRRC SKYYINEERV EVFIQGLPGY PDNIRYDGDG HYWIAMVSGA STLWRLSMKY PFLRKITAIA
301: AKYGVELMFM KNAGVLQVDL DGNPIAYYHD QRLSHITTGI KIGNYLYCGN ILHSYIIRLD LLKYPAQKKK L

Arabidopsis Description

SSL5Protein STRICTOSIDINE SYNTHASE-LIKE 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAZ7]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.