Factsheet for Bra007293.1-P

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

cytosol 1
extracellular 5
endoplasmic reticulum 4
vacuole 7
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06144	Canola	vacuole	99.46	99.46
CDX72080	Canola	endoplasmic reticulum, extracellular, golgi	96.48	96.48
Bra014652.1-P	Field mustard	extracellular, golgi, vacuole	88.08	87.84
Bra034344.1-P	Field mustard	vacuole	86.45	86.22
Bra003263.1-P	Field mustard	vacuole	86.18	85.95
AT3G57020.1	Thale cress	vacuole	81.3	81.08
Bra014655.1-P	Field mustard	endoplasmic reticulum, golgi	65.31	63.25
Bra004614.1-P	Field mustard	vacuole	63.14	63.14
Bra000223.1-P	Field mustard	vacuole	61.52	61.52
Bra018623.1-P	Field mustard	cytosol	39.02	41.03
Bra007294.1-P	Field mustard	vacuole	41.46	40.91
KRH66809	Soybean	endoplasmic reticulum	40.38	40.16
KRG95135	Soybean	endoplasmic reticulum	40.38	40.16
Bra002383.1-P	Field mustard	vacuole	38.75	36.2
Bra000222.1-P	Field mustard	cytosol	33.6	35.94
Bra008126.1-P	Field mustard	vacuole	29.27	33.03
Bra004613.1-P	Field mustard	vacuole	32.79	32.27
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	20.05	31.49
Bra007457.1-P	Field mustard	golgi, vacuole	34.42	30.75
Bra014536.1-P	Field mustard	vacuole	34.42	30.68
Bra008127.1-P	Field mustard	vacuole	27.1	30.49
Bra015943.1-P	Field mustard	vacuole	26.83	30.37
Bra003820.1-P	Field mustard	vacuole	25.75	29.41
Bra008124.1-P	Field mustard	vacuole	25.2	28.62
Bra038899.1-P	Field mustard	golgi, vacuole	21.95	21.83
Bra036798.1-P	Field mustard	vacuole	21.95	19.57
Bra038898.1-P	Field mustard	golgi, vacuole	20.6	19.14
Bra015944.1-P	Field mustard	vacuole	23.58	14.57

Protein Annotations

Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	EnsemblPlantsGene:Bra007293	EnsemblPlants:Bra007293.1	EnsemblPlants:Bra007293.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0016020	GO:GO:0016021	GO:GO:0016844	InterPro:IPR011042	UniProt:M4CSV1	PFAM:PF03088
PANTHER:PTHR10426	PANTHER:PTHR10426:SF24	SUPFAM:SSF63829	InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	TMHMM:TMhelix
UniParc:UPI0002542C75	SEG:seg	:	:	:	:

Description

AT3G57020 (E=6e-178) | strictosidine synthase family protein

Coordinates

chrA09:-:28424167..28426226

Molecular Weight (calculated)

41595.1 Da

IEP (calculated)

7.496

GRAVY (calculated)

-0.294

Length

369 amino acids

Sequence
(BLAST)

001: MPTSQKAPTW AIAVVLAVFA VISYQILFAP DDLKGTKNIL PMAKTIPLPV DGPESIEWDP QGEGPYAAVV DGRILKWRGH DLGWVEFAHT SPYRGNCSRH
101: EVVPTCGRPL GLSFEKKTGD LYICDGYLGR MKVGPEGGLA ELVVDQAEGR KVMFANQMDI DEEEDVLYFN DSSDKYHFRE VFYVLFNGER SGRVIRFNKK
201: TKEAKVVMDN LRCNNGLALN KDRSFLITCE SATGLVHRYW IKGPKAGTRD IFSKVPGYPD NIRLTPTGDF WLGIHCKKNL IGRLIVNNKW LGKLVEKTVP
301: LNFLIQEMNG FRQQGIAVKI SGETGEVLEI LEDKEGKHMQ YVSEAYERDD GKLWFGSVFS PAVWVLDRK

Best Arabidopsis Sequence Match ( AT3G57020.1 )
(BLAST)

001: MPINQKIPTW FAVPAVFAVL SVISYQTLIV PENLEGAKNV LTMAKTIPIP VAGPESIEFD PKGEGPYAAV VDGRILKWRG DDLGWVDFAY TSPHRGNCSK
101: TEVVPTCGRP LGLTFEKKTG DLYICDGYLG LMKVGPEGGL AELIVDEAEG RKVMFANQGD IDEEEDVFYF NDSSDKYHFR DVFFVAVSGE RSGRVIRYDK
201: KTKEAKVIMD NLVCNNGLAL NKDRSFLITC ESGTSLVHRY WIKGPKAGTR DIFAKVPGYP DNIRLTSTGD FWIGLHCKKN LIGRLIVKYK WLGKLVEKTM
301: KLEYVIAFIN GFKPHGVAVK ISGETGEVLE LLEDKEGKTM KYVSEAYERD DGKLWFGSVY WPAVWVLDRK

Arabidopsis Description

SSL9Protein STRICTOSIDINE SYNTHASE-LIKE 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1J6]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.