Factsheet for Bra007294.1-P

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

cytosol 1
plastid 2
plasma membrane 5
extracellular 4
endoplasmic reticulum 4
vacuole 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
ChloroP:	plastid
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06143	Canola	vacuole	98.4	95.83
AT3G57030.1	Thale cress	endoplasmic reticulum, extracellular, golgi	85.56	85.56
Solyc10g079610.1.1	Tomato	vacuole	64.44	64.78
PGSC0003DMT400076777	Potato	vacuole	64.44	64.78
VIT_08s0007g05370.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	63.64	64.32
Bra018623.1-P	Field mustard	cytosol	45.19	48.15
Bra002383.1-P	Field mustard	vacuole	49.47	46.84
Bra000223.1-P	Field mustard	vacuole	45.72	46.34
Bra000222.1-P	Field mustard	cytosol	41.98	45.51
Bra004614.1-P	Field mustard	vacuole	44.38	44.99
Bra014655.1-P	Field mustard	endoplasmic reticulum, golgi	43.85	43.04
Bra004613.1-P	Field mustard	vacuole	43.05	42.93
Bra034344.1-P	Field mustard	vacuole	41.18	41.62
Bra007293.1-P	Field mustard	vacuole	40.91	41.46
Bra014652.1-P	Field mustard	extracellular, golgi, vacuole	40.64	41.08
Bra003263.1-P	Field mustard	vacuole	40.64	41.08
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	24.87	39.57
Bra008127.1-P	Field mustard	vacuole	34.22	39.02
Bra008126.1-P	Field mustard	vacuole	33.69	38.53
Bra003820.1-P	Field mustard	vacuole	32.62	37.77
Bra015943.1-P	Field mustard	vacuole	32.89	37.73
Bra007457.1-P	Field mustard	golgi, vacuole	40.91	37.05
Bra014536.1-P	Field mustard	vacuole	40.64	36.72
Bra008124.1-P	Field mustard	vacuole	31.55	36.31
Bra038899.1-P	Field mustard	golgi, vacuole	24.6	24.8
Bra038898.1-P	Field mustard	golgi, vacuole	24.6	23.17
Bra036798.1-P	Field mustard	vacuole	24.06	21.74
Bra015944.1-P	Field mustard	vacuole	31.02	19.43

Protein Annotations

Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	EnsemblPlantsGene:Bra007294	EnsemblPlants:Bra007294.1	EnsemblPlants:Bra007294.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005618	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005886	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009505	GO:GO:0009506	GO:GO:0016020	GO:GO:0016844	GO:GO:0030312	InterPro:IPR011042
UniProt:M4CSV2	PFAM:PF03088	PANTHER:PTHR10426	PANTHER:PTHR10426:SF22	SUPFAM:SSF63829	SignalP:SignalP-noTM
InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	UniParc:UPI0002542C76	SEG:seg	:	:

Description

AT3G57030 (E=4e-180) | strictosidine synthase family protein

Coordinates

chrA09:-:28430455..28432559

Molecular Weight (calculated)

41082.4 Da

IEP (calculated)

8.445

GRAVY (calculated)

-0.033

Length

374 amino acids

Sequence
(BLAST)

001: MTMLTVFFST AIVTIIAVLA SLSSQKGSGV FAPPKISGSR DVFPSAKVLN LTGASGPESI AFDPSGEGPY VGVSDGRVLK WRGESLGWSD FAYTSANREK
101: CVRPFAPELE HVCGRPLGLR FDEKTGDLYI ADAYFGLMIV GPAGGLAKSL VTEAEGQPFR FTNDLDIDEH QDVIYFTDTS TRFQRRQFLA AVLNVDKTGR
201: LIKYDRTSKK VTVLVQGIAF ANGVALSKDR SFVLVAETTT CKILRLWLSG PNAGAQDVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLSQAWFRD
301: LLLRFPISGP RLHSLFTGGR PHATAMKLSE SGEVLEVLED REGKRLRFIS EVEEKDGKLW IGSVLMPFLG LYDL

Best Arabidopsis Sequence Match ( AT3G57030.1 )
(BLAST)

001: MTMMIITVFL TVIAAVLAIL VKNSQTGSGI FAPPEISGSR DVFPSAKVVN LTGASGPESI AFDPAGEGPY VGVSDGRILK WRGEPLGWSD FAHTSSNRQE
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL

Arabidopsis Description

SSL10Protein STRICTOSIDINE SYNTHASE-LIKE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3D9]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.