Factsheet for PGSC0003DMT400076777

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 4
vacuole 8
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g079610.1.1	Tomato	vacuole	94.62	94.62
VIT_08s0007g05370.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	71.24	71.62
PGSC0003DMT400044531	Potato	vacuole	69.89	69.71
CDX72079	Canola	vacuole	59.41	66.97
PGSC0003DMT400007661	Potato	vacuole	67.47	66.23
AT3G57030.1	Thale cress	endoplasmic reticulum, extracellular, golgi	65.86	65.51
KRG95135	Soybean	endoplasmic reticulum	65.05	65.23
KRH66809	Soybean	endoplasmic reticulum	65.05	65.23
PGSC0003DMT400044685	Potato	extracellular	47.04	65.06
Bra007294.1-P	Field mustard	vacuole	64.78	64.44
PGSC0003DMT400044684	Potato	vacuole	60.48	64.29
CDY06143	Canola	vacuole	64.78	62.76
PGSC0003DMT400015199	Potato	vacuole	47.04	44.76
PGSC0003DMT400007732	Potato	vacuole	45.7	43.48
PGSC0003DMT400063282	Potato	extracellular, vacuole	18.01	43.23
PGSC0003DMT400048627	Potato	cytosol, golgi, mitochondrion, vacuole	39.25	42.82
PGSC0003DMT400056839	Potato	vacuole	35.48	42.31
PGSC0003DMT400063286	Potato	vacuole	37.1	41.32
PGSC0003DMT400063277	Potato	vacuole	36.56	40.96
PGSC0003DMT400063274	Potato	vacuole	36.83	40.77
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	29.03	38.99
PGSC0003DMT400030927	Potato	golgi, plasma membrane, vacuole	40.05	36.61
PGSC0003DMT400005990	Potato	cytosol	23.12	29.76
PGSC0003DMT400003995	Potato	golgi, vacuole	27.42	27.27

Protein Annotations

EntrezGene:102600163	Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005618	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0005886	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009505	GO:GO:0009506
GO:GO:0016020	GO:GO:0016844	GO:GO:0030312	InterPro:IPR011042	UniProt:M1CXD5	PFAM:PF03088
EnsemblPlantsGene:PGSC0003DMG400029857	PGSC:PGSC0003DMG400029857	EnsemblPlants:PGSC0003DMT400076777	PANTHER:PTHR10426	PANTHER:PTHR10426:SF22	SUPFAM:SSF63829
InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	UniParc:UPI0002969CAC	RefSeq:XP_006351273.1	SEG:seg	:

Description

Strictosidine synthase [Source:PGSC_GENE;Acc:PGSC0003DMG400029857]

Coordinates

chr10:-:58200469..58203988

Molecular Weight (calculated)

40625.7 Da

IEP (calculated)

7.416

GRAVY (calculated)

-0.065

Length

372 amino acids

Sequence
(BLAST)

001: MNATKLILSA AAVAIITALL TLSSKNVYSP PSIPGSKDLL SKSEVIHLKG AVGPESVAFD PNGEGPYTGV ADGRILKWNG DSDGWVDFAV TSSQRKQCVH
101: PFAPQMEHVC GRPLGLRFDT RTGDLYVADA YLGLHVVGPS GGLATSLVTE VEGQHLRFTN DLDIDEQEDV IYFTDTSTQF QRRQFIASVV SGDKTGRLMK
201: YDISTKAVTV LLRGLAFANG VALSKDKSFV LVAETTTCRV VRHWLKGPHA GKHDTFADLP GYPDNIRRNS RGEFWVGLHS KRSLLAKLVT SNSWLGKTIL
301: KLPFTFQQLH FLLVGGQPHA TAIKLSEDGQ VLEVLEDLES KTLKFISEVE EKNGKLWIGS VLVPFIGVHE LS

Best Arabidopsis Sequence Match ( AT3G57030.1 )
(BLAST)

001: MTMMIITVFL TVIAAVLAIL VKNSQTGSGI FAPPEISGSR DVFPSAKVVN LTGASGPESI AFDPAGEGPY VGVSDGRILK WRGEPLGWSD FAHTSSNRQE
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL

Arabidopsis Description

SSL10Protein STRICTOSIDINE SYNTHASE-LIKE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3D9]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.