Factsheet for PGSC0003DMT400063274

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 8
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400063282	Potato	extracellular, vacuole	41.37	89.68
PGSC0003DMT400063286	Potato	vacuole	87.5	88.02
Solyc03g114560.2.1	Tomato	extracellular	85.12	87.46
PGSC0003DMT400063277	Potato	vacuole	66.96	67.77
PGSC0003DMT400056839	Potato	vacuole	51.79	55.77
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	44.05	53.43
VIT_17s0000g04600.t01	Wine grape	vacuole	47.02	46.06
CDX73037	Canola	vacuole	39.58	40.55
CDX96505	Canola	vacuole	39.29	40.24
KRH56734	Soybean	vacuole	40.77	40.06
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	27.98	40.0
KRH03206	Soybean	vacuole	39.88	39.88
KRH54773	Soybean	vacuole	39.88	39.76
Bra008126.1-P	Field mustard	vacuole	37.5	38.53
Zm00001d012363_P001	Maize	endoplasmic reticulum, extracellular	16.67	38.36
CDY47728	Canola	vacuole	37.2	38.23
AT1G74010.1	Thale cress	vacuole	36.9	38.15
HORVU2Hr1G013460.2	Barley	golgi, mitochondrion, vacuole	33.04	38.14
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	35.12	38.06
Zm00001d029115_P001	Maize	extracellular, vacuole	26.49	38.03
Bra008127.1-P	Field mustard	vacuole	36.9	37.8
AT1G74020.1	Thale cress	vacuole	37.5	37.61
CDX73039	Canola	vacuole	36.31	37.42
CDX96506	Canola	vacuole	36.01	37.23
Bra015943.1-P	Field mustard	vacuole	36.01	37.12
CDX96507	Canola	vacuole	36.01	37.12
PGSC0003DMT400044684	Potato	vacuole	38.39	36.86
PGSC0003DMT400076777	Potato	vacuole	40.77	36.83
CDX73038	Canola	vacuole	35.42	36.62
AT1G74000.1	Thale cress	vacuole	35.71	36.47
KRH63133	Soybean	peroxisome, vacuole	18.75	36.42
CDY47729	Canola	vacuole	35.12	36.31
TraesCS2A01G078000.1	Wheat	vacuole	36.9	36.15
HORVU3Hr1G065520.3	Barley	extracellular	34.52	36.02
TraesCS3A01G256600.1	Wheat	vacuole	36.01	36.01
TraesCS3B01G289800.1	Wheat	vacuole	36.01	36.01
Bra008124.1-P	Field mustard	vacuole	34.82	36.0
HORVU6Hr1G026020.1	Barley	cytosol	26.49	35.89
CDY45861	Canola	vacuole	35.12	35.76
CDY45863	Canola	vacuole	34.52	35.69
Bra003820.1-P	Field mustard	vacuole	34.23	35.6
TraesCS2B01G093000.1	Wheat	golgi, vacuole	36.31	35.57
TraesCS2D01G076000.1	Wheat	golgi, vacuole	36.31	35.57
TraesCS5B01G382800.1	Wheat	vacuole	36.01	35.48
HORVU5Hr1G093840.1	Barley	vacuole	35.71	35.4
TraesCS5B01G383000.1	Wheat	vacuole	35.71	35.4
TraesCS2B01G092900.1	Wheat	golgi, vacuole	36.01	35.38
CDY66188	Canola	vacuole	34.52	35.37
TraesCS3A01G298200.1	Wheat	cytosol	33.33	35.33
TraesCS2D01G076200.1	Wheat	vacuole	36.01	35.28
Zm00001d012366_P001	Maize	vacuole	36.01	35.07
Zm00001d012368_P001	Maize	golgi, vacuole	36.01	35.07
Zm00001d029117_P001	Maize	vacuole	35.12	34.91
HORVU2Hr1G012970.2	Barley	mitochondrion	36.31	34.86
Os01t0698200-00	Rice	mitochondrion	30.06	34.83
Zm00001d012371_P001	Maize	golgi, vacuole	35.71	34.78
Zm00001d012377_P001	Maize	vacuole	35.71	34.78
Zm00001d029108_P001	Maize	vacuole	32.74	34.7
Zm00001d020306_P001	Maize	endoplasmic reticulum, vacuole	35.42	34.69
CDY66189	Canola	vacuole	30.65	34.68
Zm00001d029111_P001	Maize	vacuole	34.82	34.62
CDX68204	Canola	vacuole	33.63	34.45
TraesCS2D01G076400.1	Wheat	vacuole	35.12	34.4
TraesCSU01G189700.1	Wheat	vacuole	35.12	34.4
TraesCS5B01G195300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	35.42	34.39
TraesCS5D01G202700.1	Wheat	vacuole	35.42	34.39
Zm00001d012375_P001	Maize	vacuole	34.23	34.33
OQU75879	Sorghum	vacuole	31.25	34.31
PGSC0003DMT400007661	Potato	vacuole	38.69	34.3
TraesCS3B01G559000.1	Wheat	cytosol	19.05	34.22
EES01763	Sorghum	vacuole	35.12	34.2
TraesCS2D01G076300.1	Wheat	vacuole	35.12	34.1
TraesCS3D01G303900.1	Wheat	cytosol	32.44	34.06
PGSC0003DMT400044531	Potato	vacuole	37.8	34.05
Zm00001d012249_P001	Maize	vacuole	34.82	33.91
HORVU5Hr1G058910.2	Barley	endoplasmic reticulum, extracellular, vacuole	34.82	33.81
KXG39404	Sorghum	golgi, vacuole	34.23	33.72
TraesCS5D01G389100.1	Wheat	plastid, vacuole	35.42	33.52
TraesCS3D01G503900.1	Wheat	nucleus	30.95	33.44
EES01841	Sorghum	vacuole	34.52	33.43
Os08t0442200-01	Rice	extracellular	34.82	33.43
GSMUA_Achr5P05340_001	Banana	vacuole	35.71	33.43
Zm00001d012252_P001	Maize	vacuole	34.23	33.33
TraesCS3D01G256900.1	Wheat	mitochondrion, plastid	35.12	33.05
TraesCS3B01G558800.1	Wheat	cytosol	20.54	33.01
EES17427	Sorghum	golgi, vacuole	33.63	32.94
EER96671	Sorghum	endoplasmic reticulum, golgi	34.23	32.86
OQU76676	Sorghum	extracellular, golgi, vacuole	33.63	32.66
HORVU7Hr1G028550.2	Barley	plastid	17.26	32.58
TraesCS3A01G496700.1	Wheat	golgi, vacuole	33.33	32.46
TraesCS3B01G559100.1	Wheat	vacuole	33.33	32.46
TraesCS7D01G075900.1	Wheat	vacuole	33.33	32.46
TraesCS3B01G338500.1	Wheat	extracellular, golgi, vacuole	33.04	32.36
TraesCS1A01G026500.1	Wheat	vacuole	33.04	32.17
TraesCS3D01G504000.1	Wheat	vacuole	33.04	32.17
TraesCSU01G223800.1	Wheat	vacuole	33.04	32.17
TraesCS7D01G076300.1	Wheat	vacuole	34.52	32.13
HORVU3Hr1G109810.1	Barley	golgi, vacuole	33.33	32.09
Os08t0175000-00	Rice	golgi, mitochondrion, vacuole	33.93	32.02
PGSC0003DMT400044685	Potato	extracellular	25.6	31.97
TraesCS7D01G076000.1	Wheat	vacuole	32.44	31.96
TraesCS3A01G496900.1	Wheat	vacuole	33.04	31.71
Zm00001d020308_P001	Maize	cytosol, plastid, vacuole	15.18	31.68
PGSC0003DMT400048627	Potato	cytosol, golgi, mitochondrion, vacuole	32.14	31.67
OQU87434	Sorghum	golgi, vacuole	33.33	31.64
TraesCS7B01G040900.1	Wheat	golgi, vacuole	32.74	31.61
TraesCS7D01G139900.1	Wheat	vacuole	32.74	31.61
TraesCSU01G104000.1	Wheat	golgi, vacuole	32.74	31.61
TraesCS7D01G140500.1	Wheat	golgi, vacuole	32.44	31.59
EER90208	Sorghum	vacuole	32.44	31.5
EES07680	Sorghum	golgi, vacuole	32.44	31.5
OQU85880	Sorghum	golgi, vacuole	32.44	31.5
Os07t0543600-00	Rice	golgi, vacuole	32.74	31.43
TraesCS5A01G188200.1	Wheat	vacuole	33.93	31.41
TraesCS7B01G040400.1	Wheat	golgi, vacuole	32.44	31.32
TraesCS5B01G195400.1	Wheat	vacuole	33.93	31.32
TraesCS5D01G202800.1	Wheat	golgi, vacuole	33.93	31.32
EES05895	Sorghum	golgi, vacuole	32.14	31.21
HORVU5Hr1G078340.1	Barley	golgi, vacuole	22.62	31.15
Os06t0623700-01	Rice	golgi, vacuole	32.44	31.14
HORVU2Hr1G064060.1	Barley	mitochondrion, vacuole	23.51	31.1
TraesCS7D01G076600.1	Wheat	cytosol	19.35	31.1
Zm00001d020307_P001	Maize	endoplasmic reticulum, vacuole	19.05	31.07
OQU79673	Sorghum	vacuole	31.55	30.99
HORVU7Hr1G028580.1	Barley	golgi, vacuole	32.44	30.97
EES05427	Sorghum	vacuole	31.55	30.81
TraesCS2B01G281700.1	Wheat	golgi, vacuole	31.55	30.81
TraesCS7D01G140000.1	Wheat	golgi, vacuole	31.85	30.75
TraesCS7D01G140600.1	Wheat	endoplasmic reticulum, plasma membrane	27.98	30.62
EER96672	Sorghum	vacuole	33.33	30.6
TraesCS5A01G188300.1	Wheat	extracellular, plasma membrane, vacuole	34.23	30.5
HORVU5Hr1G058940.2	Barley	vacuole	33.04	30.25
PGSC0003DMT400015199	Potato	vacuole	35.12	30.18
TraesCS7A01G138300.1	Wheat	cytosol	18.75	30.14
TraesCS7A01G138700.1	Wheat	cytosol	18.75	30.14
HORVU5Hr1G091230.1	Barley	golgi, mitochondrion, plastid, vacuole	31.85	30.06
PGSC0003DMT400030927	Potato	golgi, plasma membrane, vacuole	36.31	29.98
TraesCS7A01G138800.1	Wheat	golgi, vacuole	27.08	29.84
TraesCSU01G240600.1	Wheat	cytosol	16.67	29.63
TraesCSU01G255900.1	Wheat	cytosol	16.67	29.63
TraesCS7D01G076500.1	Wheat	cytosol	16.67	29.47
HORVU5Hr1G009400.2	Barley	cytosol, mitochondrion, plastid, vacuole	11.9	29.41
TraesCS5B01G330900.1	Wheat	extracellular, vacuole	16.07	29.19
TraesCS1A01G437900.1	Wheat	cytosol	16.07	29.03
HORVU3Hr1G074780.3	Barley	cytosol, vacuole	32.14	28.88
PGSC0003DMT400007732	Potato	vacuole	33.33	28.64
Os09t0374900-00	Rice	cytosol, golgi, plastid, vacuole	32.14	28.27
EES17425	Sorghum	extracellular	21.43	27.48
TraesCS2A01G260200.1	Wheat	mitochondrion, vacuole	27.68	26.88
PGSC0003DMT400005990	Potato	cytosol	21.73	25.26
HORVU4Hr1G016850.1	Barley	cytosol	12.5	24.14
PGSC0003DMT400003995	Potato	golgi, vacuole	23.21	20.86
Zm00001d012373_P001	Maize	vacuole	35.71	20.41
Bra015944.1-P	Field mustard	vacuole	35.71	20.1

Protein Annotations

EnsemblPlants:PGSC0003DMT400063274	EnsemblPlantsGene:PGSC0003DMG401024610	EntrezGene:107060146	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042
InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF57	PFAM:PF03088	PGSC:PGSC0003DMG401024610
RefSeq:XP_015163131.1	SUPFAM:SSF63829	UniParc:UPI0002960AE3	UniProt:M1CAD7	MapMan:50.4.3	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG401024610]

Coordinates

chr3:-:54519356..54520651

Molecular Weight (calculated)

36788.0 Da

IEP (calculated)

5.908

GRAVY (calculated)

-0.046

Length

336 amino acids

Sequence
(BLAST)

001: MEIVSITKTT LLIFQSLIFL NVSPYLVHCA LSRLQLPSRT FGPDSSAFDT KGGGPYTGVG DGRVMKYQGP NVGFTEFAIT SPNRTKERCE GTNDPISQPI
101: CGRPYGLGFY RKTGDLYITD AYYGLLVVKP SGGLATPLVT SFEGTPFAYL DSLDIDQERG IIYFVDSGAI FRTSNRLLIA LSGDTTGRLF KYDIATKQVT
201: LLLDKLSGPA GVALSNDKSY LLVSEAIGKR ITRFWLEGAK ANSSDVFANI DGNPDNIKRT VSGEFWVAVV SVKLKLLIIP TIISTGKRMN QSGEVVETRD
301: FTAQYTSPNG ITEVHEYNDK LYIGFLDQNF IGVDDV

Best Arabidopsis Sequence Match ( AT1G74020.1 )
(BLAST)

001: MTSFCSMISL LLLLSLSSAV FSDDASFQKL PVPETRSGPE AFAFDSTGKG FYTGVSGGKI LKYLPETGYV DFAQITESSN SSWCDGTIGT ALAGRCGRPA
101: GIAFNEKTGD LYVADAPLGL HVISPAGGLA TKITDSVDGK PFKFLDGLDV DPTTGVVYFT SFSSRFSPIQ VLIALGLKDA TGKLYKYDPS TKVVTVLMEG
201: LSGSAGCAVS SDGSFVLVSQ FTKSNIKRYW IKGPKAGSSE DFTNSVSNPD NIKRIGSTGN FWVASVVNKI IVPTNPSAVK VNSNGEVLQT IPLKDKFGDT
301: LLSEVNEFEG NLYIGTLTGP FAGILKLEKG SCPAT

Arabidopsis Description

SSL12Protein STRICTOSIDINE SYNTHASE-LIKE 12 [Source:UniProtKB/Swiss-Prot;Acc:P94111]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.