Factsheet for Zm00001d012252_P001

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012249_P001	Maize	vacuole	98.55	98.55
EES01841	Sorghum	vacuole	90.72	90.2
Zm00001d012366_P001	Maize	vacuole	88.7	88.7
Zm00001d012368_P001	Maize	golgi, vacuole	88.7	88.7
Zm00001d012371_P001	Maize	golgi, vacuole	88.41	88.41
Zm00001d012377_P001	Maize	vacuole	87.83	87.83
Zm00001d012375_P001	Maize	vacuole	84.35	86.87
Zm00001d012363_P001	Maize	endoplasmic reticulum, extracellular	36.23	85.62
OQU87434	Sorghum	golgi, vacuole	86.38	84.18
Zm00001d029115_P001	Maize	extracellular, vacuole	55.07	81.2
Zm00001d029108_P001	Maize	vacuole	72.46	78.86
Zm00001d029111_P001	Maize	vacuole	77.1	78.7
Zm00001d029117_P001	Maize	vacuole	77.1	78.7
Zm00001d012373_P001	Maize	vacuole	86.96	51.02
Zm00001d020306_P001	Maize	endoplasmic reticulum, vacuole	50.43	50.73
Zm00001d020308_P001	Maize	cytosol, plastid, vacuole	23.48	50.31
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	43.77	48.71
GSMUA_Achr5P05340_001	Banana	vacuole	48.41	46.52
VIT_10s0042g00010.t01	Wine grape	vacuole	40.87	44.76
Zm00001d020307_P001	Maize	endoplasmic reticulum, vacuole	26.67	44.66
VIT_13s0074g00070.t01	Wine grape	vacuole	35.36	44.53
VIT_00s0575g00010.t01	Wine grape	vacuole	40.0	44.23
VIT_10s0071g00020.t01	Wine grape	vacuole	39.42	44.01
VIT_10s0042g00020.t01	Wine grape	vacuole	40.58	43.48
VIT_10s0042g00050.t01	Wine grape	vacuole	40.29	43.17
VIT_13s0074g00080.t01	Wine grape	vacuole	40.0	42.86
VIT_00s0575g00020.t01	Wine grape	vacuole	40.0	42.86
VIT_10s0071g00010.t01	Wine grape	vacuole	39.42	42.24
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	22.03	41.99
VIT_10s0042g00030.t01	Wine grape	vacuole	32.75	41.39
VIT_10s0071g00250.t01	Wine grape	vacuole	40.29	40.88
KRH07462	Soybean	vacuole	40.0	39.77
PGSC0003DMT400063282	Potato	extracellular, vacuole	17.68	39.35
PGSC0003DMT400056839	Potato	vacuole	35.36	39.1
VIT_17s0000g04600.t01	Wine grape	vacuole	38.55	38.78
KRH45407	Soybean	nucleus	39.13	38.68
CDX73037	Canola	vacuole	36.23	38.11
Solyc12g039070.1.1	Tomato	nucleus	35.65	36.94
CDX96505	Canola	vacuole	35.07	36.89
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	29.57	36.82
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	24.93	36.6
AT1G74010.1	Thale cress	vacuole	33.91	36.0
Solyc03g114550.1.1	Tomato	vacuole	28.41	35.77
Bra003820.1-P	Field mustard	vacuole	33.04	35.29
KRH03206	Soybean	vacuole	34.2	35.12
PGSC0003DMT400063277	Potato	vacuole	33.62	34.94
Solyc03g114530.2.1	Tomato	vacuole	33.33	34.64
Solyc03g114560.2.1	Tomato	extracellular	32.75	34.56
KRH56734	Soybean	vacuole	34.2	34.5
CDY47729	Canola	vacuole	32.46	34.46
PGSC0003DMT400063274	Potato	vacuole	33.33	34.23
Bra008124.1-P	Field mustard	vacuole	32.17	34.15
CDY66188	Canola	vacuole	32.46	34.15
CDY66189	Canola	vacuole	29.28	34.01
Solyc03g114540.1.1	Tomato	vacuole	33.04	33.93
CDY45863	Canola	vacuole	31.88	33.85
CDX68204	Canola	vacuole	32.17	33.84
KRH54773	Soybean	vacuole	33.04	33.83
CDX96507	Canola	vacuole	31.88	33.74
Bra015943.1-P	Field mustard	vacuole	31.88	33.74
CDY47728	Canola	vacuole	31.88	33.64
Bra008126.1-P	Field mustard	vacuole	31.88	33.64
Bra008127.1-P	Field mustard	vacuole	31.88	33.54
PGSC0003DMT400063286	Potato	vacuole	32.46	33.53
CDY45861	Canola	vacuole	31.88	33.33
Zm00001d047858_P001	Maize	endoplasmic reticulum, golgi, mitochondrion, vacuole	39.71	33.25
AT1G74000.1	Thale cress	vacuole	31.59	33.13
CDX73039	Canola	vacuole	31.3	33.13
AT1G74020.1	Thale cress	vacuole	31.88	32.84
CDX96506	Canola	vacuole	30.72	32.62
VIT_17s0000g04610.t01	Wine grape	vacuole	34.49	32.43
CDX73038	Canola	vacuole	30.43	32.31
KRH63133	Soybean	peroxisome, vacuole	15.07	30.06
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	39.13	29.8
Zm00001d052471_P001	Maize	vacuole	38.55	27.37
Zm00001d034032_P001	Maize	plasma membrane	39.13	25.05
Zm00001d006853_P001	Maize	vacuole	26.09	24.52
Bra015944.1-P	Field mustard	vacuole	30.43	17.59

Protein Annotations

Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	ProteinID:AQK99203.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:IPR011042	UniProt:K7V300
PFAM:PF03088	PANTHER:PTHR10426	PANTHER:PTHR10426:SF56	SUPFAM:SSF63829	SignalP:SignalP-noTM	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	TMHMM:TMhelix	UniParc:UPI000221F208	EnsemblPlantsGene:Zm00001d012252	EnsemblPlants:Zm00001d012252_P001	EnsemblPlants:Zm00001d012252_T001
SEG:seg	:	:	:	:	:

Description

Strictosidine synthase 1

Coordinates

chr8:-:171035928..171036965

Molecular Weight (calculated)

36633.6 Da

IEP (calculated)

6.050

GRAVY (calculated)

-0.047

Length

345 amino acids

Sequence
(BLAST)

001: MGRRFNLTMS LLAVVVLALL AAPCACAAQV KTTDTRWSFQ LPLPSGVSGA ESLAFDGKGE GPYAGVSDGR VLKWGGSAVG WTTFAHSANY RKIPLCTAGV
101: VPSAETESMC GRPLGLQFHA KTGDLYIADA YLGLTRVGPG GGEAEVLATG ADDGVPFNFV NGLDVDEATG DVYFTDSSAT YPRRFNTEIM MNADATGRLL
201: RYDARTRSVS VLKAGLPYPN GVAVSPDGEQ VVVAHTVPCQ AFRYFLRGAR KGQYELLADL PGYPDNVRRD GRGGYWVALN QEKQRLDATP ATGPVKHLVG
301: VRLDAHGVEV EELSAAKGVT LSDVAETKGK LWLGSIELEY VGLVA

Best Arabidopsis Sequence Match ( AT2G41290.1 )
(BLAST)

001: MMKLLLVVAT SVALIFSVTD LSGEGPKHGG ESMLTVQIPD FRLIPTTGAL GPESFVFDFF GDGPYTGLSD GRIVKWLANE SRWIDFAVTT SAREGCEGPH
101: EHQRTEHVCG RPLGLAFDKS TGDLYIADAY MGLLKVGPTG GVATQVLPRE LNEALRFTNS LDINPRTGVV YFTDSSSVYQ RRNYIGAMMS GDKTGRLMKY
201: DNTKQVTTLL SNLAFVNGVA LSQNGDYLLV VETAMCRILR YWLNETSVKS QSHDNYEIFA EGLPGFPDNI KRSPRGGFWV GLNTKHSKLT KFAMSNAWLG
301: RAALGLPVDW MKVHSVWARY NGNGMAVRLS EDSGVILEVF EGKNENKWIS ISEVEEKDGT LWVGSVNTPF AGMYKI

Arabidopsis Description

SSL2Protein STRICTOSIDINE SYNTHASE-LIKE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLG8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.