Factsheet for Zm00001d012249_P001

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012252_P001	Maize	vacuole	98.55	98.55
EES01841	Sorghum	vacuole	90.14	89.63
Zm00001d012368_P001	Maize	golgi, vacuole	88.12	88.12
Zm00001d012366_P001	Maize	vacuole	88.12	88.12
Zm00001d012371_P001	Maize	golgi, vacuole	87.83	87.83
Zm00001d012377_P001	Maize	vacuole	87.25	87.25
Zm00001d012375_P001	Maize	vacuole	83.77	86.27
Zm00001d012363_P001	Maize	endoplasmic reticulum, extracellular	35.94	84.93
OQU87434	Sorghum	golgi, vacuole	86.38	84.18
Zm00001d029115_P001	Maize	extracellular, vacuole	55.36	81.62
Zm00001d029117_P001	Maize	vacuole	77.1	78.7
Zm00001d029108_P001	Maize	vacuole	72.17	78.55
Zm00001d029111_P001	Maize	vacuole	76.81	78.4
Zm00001d020306_P001	Maize	endoplasmic reticulum, vacuole	50.72	51.02
Zm00001d012373_P001	Maize	vacuole	86.38	50.68
Zm00001d020308_P001	Maize	cytosol, plastid, vacuole	23.48	50.31
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	43.77	48.71
GSMUA_Achr5P05340_001	Banana	vacuole	48.41	46.52
VIT_13s0074g00070.t01	Wine grape	vacuole	35.65	44.89
Zm00001d020307_P001	Maize	endoplasmic reticulum, vacuole	26.67	44.66
VIT_10s0042g00010.t01	Wine grape	vacuole	40.58	44.44
VIT_00s0575g00010.t01	Wine grape	vacuole	40.0	44.23
VIT_10s0071g00020.t01	Wine grape	vacuole	39.42	44.01
VIT_10s0042g00020.t01	Wine grape	vacuole	40.58	43.48
VIT_10s0042g00050.t01	Wine grape	vacuole	40.29	43.17
VIT_00s0575g00020.t01	Wine grape	vacuole	40.0	42.86
VIT_13s0074g00080.t01	Wine grape	vacuole	40.0	42.86
VIT_10s0071g00010.t01	Wine grape	vacuole	39.42	42.24
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	22.03	41.99
VIT_10s0071g00250.t01	Wine grape	vacuole	41.16	41.76
VIT_10s0042g00030.t01	Wine grape	vacuole	33.04	41.76
KRH07462	Soybean	vacuole	40.29	40.06
PGSC0003DMT400056839	Potato	vacuole	35.94	39.74
PGSC0003DMT400063282	Potato	extracellular, vacuole	17.68	39.35
KRH45407	Soybean	nucleus	39.42	38.97
VIT_17s0000g04600.t01	Wine grape	vacuole	38.55	38.78
CDX73037	Canola	vacuole	35.94	37.8
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	30.14	37.55
Solyc12g039070.1.1	Tomato	nucleus	36.23	37.54
CDX96505	Canola	vacuole	34.78	36.59
AT1G74010.1	Thale cress	vacuole	34.2	36.31
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	24.64	36.17
Solyc03g114550.1.1	Tomato	vacuole	28.7	36.13
Bra003820.1-P	Field mustard	vacuole	33.33	35.6
Solyc03g114530.2.1	Tomato	vacuole	33.91	35.24
PGSC0003DMT400063277	Potato	vacuole	33.91	35.24
Solyc03g114560.2.1	Tomato	extracellular	33.04	34.86
PGSC0003DMT400063274	Potato	vacuole	33.91	34.82
KRH03206	Soybean	vacuole	33.91	34.82
CDY66189	Canola	vacuole	29.86	34.68
Solyc03g114540.1.1	Tomato	vacuole	33.62	34.52
CDY47729	Canola	vacuole	32.46	34.46
CDY66188	Canola	vacuole	32.75	34.45
KRH56734	Soybean	vacuole	33.91	34.21
Bra008124.1-P	Field mustard	vacuole	32.17	34.15
CDX68204	Canola	vacuole	32.46	34.15
PGSC0003DMT400063286	Potato	vacuole	33.04	34.13
KRH54773	Soybean	vacuole	33.33	34.12
CDY47728	Canola	vacuole	32.17	33.95
Bra008126.1-P	Field mustard	vacuole	32.17	33.95
CDY45863	Canola	vacuole	31.88	33.85
Bra008127.1-P	Field mustard	vacuole	32.17	33.84
CDX96507	Canola	vacuole	31.88	33.74
Bra015943.1-P	Field mustard	vacuole	31.88	33.74
AT1G74000.1	Thale cress	vacuole	32.17	33.74
CDY45861	Canola	vacuole	32.17	33.64
Zm00001d047858_P001	Maize	endoplasmic reticulum, golgi, mitochondrion, vacuole	40.0	33.5
AT1G74020.1	Thale cress	vacuole	32.17	33.13
CDX73039	Canola	vacuole	31.3	33.13
CDX96506	Canola	vacuole	30.72	32.62
CDX73038	Canola	vacuole	30.43	32.31
VIT_17s0000g04610.t01	Wine grape	vacuole	34.2	32.15
KRH63133	Soybean	peroxisome, vacuole	15.07	30.06
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	39.42	30.02
Zm00001d052471_P001	Maize	vacuole	38.84	27.57
Zm00001d034032_P001	Maize	plasma membrane	39.13	25.05
Zm00001d006853_P001	Maize	vacuole	25.8	24.25
Bra015944.1-P	Field mustard	vacuole	30.43	17.59

Protein Annotations

EntrezGene:103636435	Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	ProteinID:AQK99199.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:IPR011042
UniProt:K7VN05	PFAM:PF03088	PANTHER:PTHR10426	PANTHER:PTHR10426:SF56	SUPFAM:SSF63829	SignalP:SignalP-noTM
InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	TMHMM:TMhelix	UniParc:UPI0002209EA4	EnsemblPlantsGene:Zm00001d012249	EnsemblPlants:Zm00001d012249_P001
EnsemblPlants:Zm00001d012249_T001	SEG:seg	:	:	:	:

Description

Protein STRICTOSIDINE SYNTHASE-LIKE 11

Coordinates

chr8:-:170969911..170970948

Molecular Weight (calculated)

36659.7 Da

IEP (calculated)

6.366

GRAVY (calculated)

-0.034

Length

345 amino acids

Sequence
(BLAST)

001: MGRRFNLTMS LLAVVVLVLL AAPCASAAQV KTTDTRWSFQ LPLPSGVSGA ESLAFDGKGE GPYAGVSDGR VLKWGGSAVG WTTFAHSANY RKIPLCTAGV
101: VPSAETESMC GRPLGLQFHA KTGDLYIADA YLGLTRVGPG GGEAEVLATG ADDGVPFNFV NGLDVDEATG DVYFTDSSAT YPRRFNTEIM MNADTTGRLL
201: RYDARTRSVS VLKAGLPYPN GVAVSPDGEQ VVVAHTVPCQ AFRYFLRGAR KGQYELLADL PGYPDNVRRD GRGGYWVALN QEKQRLDATP ATGPVKHLVG
301: VRLDAHGVVV EELTAAKGVT LSDVAETKGK LWLGSIELEY VGLVA

Best Arabidopsis Sequence Match ( AT2G41290.1 )
(BLAST)

001: MMKLLLVVAT SVALIFSVTD LSGEGPKHGG ESMLTVQIPD FRLIPTTGAL GPESFVFDFF GDGPYTGLSD GRIVKWLANE SRWIDFAVTT SAREGCEGPH
101: EHQRTEHVCG RPLGLAFDKS TGDLYIADAY MGLLKVGPTG GVATQVLPRE LNEALRFTNS LDINPRTGVV YFTDSSSVYQ RRNYIGAMMS GDKTGRLMKY
201: DNTKQVTTLL SNLAFVNGVA LSQNGDYLLV VETAMCRILR YWLNETSVKS QSHDNYEIFA EGLPGFPDNI KRSPRGGFWV GLNTKHSKLT KFAMSNAWLG
301: RAALGLPVDW MKVHSVWARY NGNGMAVRLS EDSGVILEVF EGKNENKWIS ISEVEEKDGT LWVGSVNTPF AGMYKI

Arabidopsis Description

SSL2Protein STRICTOSIDINE SYNTHASE-LIKE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLG8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.