Factsheet for Zm00001d006853_P001

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG36676	Sorghum	vacuole	86.1	87.78
TraesCS2D01G177700.1	Wheat	plasma membrane, vacuole	76.02	76.02
TraesCS2A01G170300.1	Wheat	cytosol	65.4	75.0
TraesCS2D01G177900.2	Wheat	golgi	74.39	74.79
Os07t0614000-02	Rice	vacuole	74.39	74.39
TraesCS2B01G196500.1	Wheat	golgi, vacuole	74.39	74.39
TraesCS2B01G196600.1	Wheat	golgi	72.21	72.6
TraesCS2A01G170200.1	Wheat	plasma membrane, vacuole	75.48	69.95
GSMUA_Achr11P...	Banana	golgi, vacuole	54.77	55.99
PGSC0003DMT400005990	Potato	cytosol	39.51	50.17
Solyc05g025810.2.1	Tomato	plasma membrane, vacuole	46.05	47.74
VIT_11s0016g00860.t01	Wine grape	golgi, vacuole	47.14	47.4
VIT_11s0016g00880.t01	Wine grape	plastid	47.14	47.01
KRH37504	Soybean	vacuole	45.78	46.93
KRH37503	Soybean	vacuole	34.88	40.76
VIT_11s0016g00870.t01	Wine grape	plasma membrane, vacuole	47.96	38.18
Zm00001d020308_P001	Maize	cytosol, plastid, vacuole	16.62	37.89
Zm00001d029115_P001	Maize	extracellular, vacuole	19.62	30.77
Zm00001d029108_P001	Maize	vacuole	23.71	27.44
Zm00001d012366_P001	Maize	vacuole	25.34	26.96
Zm00001d012368_P001	Maize	golgi, vacuole	25.34	26.96
Zm00001d012371_P001	Maize	golgi, vacuole	25.34	26.96
Zm00001d012377_P001	Maize	vacuole	25.34	26.96
Zm00001d029117_P001	Maize	vacuole	24.8	26.92
Zm00001d029111_P001	Maize	vacuole	24.8	26.92
Zm00001d012252_P001	Maize	vacuole	24.52	26.09
Zm00001d020306_P001	Maize	endoplasmic reticulum, vacuole	24.25	25.95
Zm00001d012249_P001	Maize	vacuole	24.25	25.8
Zm00001d012375_P001	Maize	vacuole	23.16	25.37
Zm00001d047858_P001	Maize	endoplasmic reticulum, golgi, mitochondrion, vacuole	27.25	24.27
Zm00001d034032_P001	Maize	plasma membrane	29.43	20.04
Zm00001d012363_P001	Maize	endoplasmic reticulum, extracellular	7.63	19.18
Zm00001d020307_P001	Maize	endoplasmic reticulum, vacuole	10.63	18.93
Zm00001d052471_P001	Maize	vacuole	25.07	18.93
Zm00001d012373_P001	Maize	vacuole	24.52	15.31

Protein Annotations

EntrezGene:100274166	Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	UniProt:B4FZD8	EMBL:BT042476
EMBL:EU973951	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0016844	InterPro:IPR011042	ProteinID:ONM25251.1	PFAM:PF03088	PANTHER:PTHR10426	PANTHER:PTHR10426:SF35
SUPFAM:SSF63829	SignalP:SignalP-noTM	InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	UniParc:UPI00017B7C38	EnsemblPlantsGene:Zm00001d006853
EnsemblPlants:Zm00001d006853_P001	EnsemblPlants:Zm00001d006853_T001	SEG:seg	:	:	:

Description

Protein STRICTOSIDINE SYNTHASE-LIKE 6

Coordinates

chr2:+:217837030..217839194

Molecular Weight (calculated)

39458.0 Da

IEP (calculated)

5.081

GRAVY (calculated)

0.050

Length

367 amino acids

Sequence
(BLAST)

001: MAPGLLAAAA VLAAVAASLA AHVALNCPVQ PVPSHRPPPT PPPNNLLQRL EKLGEGALDA PEDVYVDAAA GGALYTATRD GWLQRMMHPN NGSWERWRFV
101: GGTGLLGVAP SADGTMLVCD ADKGLLRVGD EGVTLLASEV EGSPIRFADA AIEASDGTVY FSDASTRFGF DRWFHDFLEF SSTGRLLRYD PRSGETSVVL
201: DRLGFANGVA LPRDEAFVVV CETMRFRCIK VWLKGDKAGE AETFVDLPGW PDNIRLGSDG HFWIAVLQLR SPWLDFITRW TFTKRVVASF PALSEWSKGA
301: AKGAMVAQVS EDGTILRVLD DSQGKVINFV TSVTEFNGDI FLGSLATNFV GKLSLARVAQ KQGAVSS

Best Arabidopsis Sequence Match ( AT3G51420.1 )
(BLAST)

001: MVLFFSTRFL FFSIFFPCLI SITLYQLDSF EPASLPADSL ITSPTSIPPL LNDRFLTGAE FIGVGLLNNP EDIAYHKDSN LIYTGCVDGW VKRVSVHDSA
101: NDSIVEDWVN TGGRPLGIAF GLHGEVIVAD ANKGLLSISD GGKKTELLTD EADGVRFKLT DAVTVADNGV LYFTDASSKY DFYQFIFDFL EGKPHGRVMS
201: FDPTTRATRV LLKDLYFANG ISMSPDQTHF VFCETIMRRC SKYYISEERV EVFIQGLPGY PDNIRYDGDG HYWIALISEV TTSWKLSMKY LFLRKLIYMA
301: AKYGVELLSI KNAAVLQVDL DGNPIAMYHD HPFSHITSGV KIGNHLYFGS LLHSYITRLD LLKYPAQKKL

Arabidopsis Description

SSL4SSL4 [Source:UniProtKB/TrEMBL;Acc:A0A178VDG6]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.