Factsheet for Zm00001d012373_P001

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012366_P001	Maize	vacuole	57.14	97.39
Zm00001d012377_P001	Maize	vacuole	57.14	97.39
Zm00001d012371_P001	Maize	golgi, vacuole	57.14	97.39
Zm00001d012363_P001	Maize	endoplasmic reticulum, extracellular	24.15	97.26
Zm00001d012375_P001	Maize	vacuole	55.27	97.01
Zm00001d012368_P001	Maize	golgi, vacuole	56.8	96.81
EES01763	Sorghum	vacuole	53.91	91.88
Zm00001d012252_P001	Maize	vacuole	51.02	86.96
Zm00001d012249_P001	Maize	vacuole	50.68	86.38
Zm00001d029115_P001	Maize	extracellular, vacuole	32.48	81.62
Zm00001d029108_P001	Maize	vacuole	42.86	79.5
Zm00001d029117_P001	Maize	vacuole	45.41	78.99
Zm00001d029111_P001	Maize	vacuole	45.41	78.99
Zm00001d020306_P001	Maize	endoplasmic reticulum, vacuole	29.93	51.31
Zm00001d020308_P001	Maize	cytosol, plastid, vacuole	13.44	49.07
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	24.83	47.1
Zm00001d020307_P001	Maize	endoplasmic reticulum, vacuole	15.82	45.15
VIT_10s0042g00010.t01	Wine grape	vacuole	23.81	44.44
GSMUA_Achr5P05340_001	Banana	vacuole	27.04	44.29
VIT_13s0074g00070.t01	Wine grape	vacuole	20.58	44.16
VIT_10s0071g00020.t01	Wine grape	vacuole	22.96	43.69
VIT_00s0575g00010.t01	Wine grape	vacuole	23.13	43.59
VIT_10s0042g00020.t01	Wine grape	vacuole	23.47	42.86
VIT_10s0042g00050.t01	Wine grape	vacuole	23.13	42.24
VIT_13s0074g00080.t01	Wine grape	vacuole	22.96	41.93
VIT_00s0575g00020.t01	Wine grape	vacuole	22.96	41.93
VIT_10s0071g00010.t01	Wine grape	vacuole	22.79	41.61
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	12.76	41.44
VIT_10s0071g00250.t01	Wine grape	vacuole	23.81	41.18
VIT_10s0042g00030.t01	Wine grape	vacuole	18.88	40.66
PGSC0003DMT400063282	Potato	extracellular, vacuole	10.54	40.0
KRH07462	Soybean	vacuole	22.96	38.9
PGSC0003DMT400056839	Potato	vacuole	20.58	38.78
VIT_17s0000g04600.t01	Wine grape	vacuole	22.11	37.9
KRH45407	Soybean	nucleus	22.45	37.82
Solyc03g114550.1.1	Tomato	vacuole	17.35	37.23
CDX73037	Canola	vacuole	20.75	37.2
Solyc12g039070.1.1	Tomato	nucleus	20.75	36.64
CDX96505	Canola	vacuole	20.41	36.59
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	17.18	36.46
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	14.46	36.17
Solyc03g114560.2.1	Tomato	extracellular	20.07	36.09
PGSC0003DMT400063277	Potato	vacuole	20.24	35.84
Solyc03g114530.2.1	Tomato	vacuole	20.24	35.84
PGSC0003DMT400063274	Potato	vacuole	20.41	35.71
KRH54773	Soybean	vacuole	20.24	35.31
AT1G74010.1	Thale cress	vacuole	19.39	35.08
Bra003820.1-P	Field mustard	vacuole	19.22	34.98
Solyc03g114540.1.1	Tomato	vacuole	19.9	34.82
PGSC0003DMT400063286	Potato	vacuole	19.73	34.73
KRH03206	Soybean	vacuole	19.73	34.52
CDY66188	Canola	vacuole	18.88	33.84
CDY47728	Canola	vacuole	18.71	33.64
Bra008126.1-P	Field mustard	vacuole	18.71	33.64
KRH56734	Soybean	vacuole	19.56	33.63
CDY47729	Canola	vacuole	18.54	33.54
Bra008127.1-P	Field mustard	vacuole	18.71	33.54
CDX68204	Canola	vacuole	18.71	33.54
AT1G74000.1	Thale cress	vacuole	18.71	33.43
CDY66189	Canola	vacuole	16.84	33.33
Bra008124.1-P	Field mustard	vacuole	18.37	33.23
CDY45861	Canola	vacuole	18.54	33.03
CDX96506	Canola	vacuole	18.2	32.92
CDY45863	Canola	vacuole	18.2	32.92
AT1G74020.1	Thale cress	vacuole	18.71	32.84
Zm00001d047858_P001	Maize	endoplasmic reticulum, golgi, mitochondrion, vacuole	22.79	32.52
CDX96507	Canola	vacuole	18.03	32.52
Bra015943.1-P	Field mustard	vacuole	18.03	32.52
CDX73038	Canola	vacuole	17.86	32.31
VIT_17s0000g04610.t01	Wine grape	vacuole	20.07	32.15
CDX73039	Canola	vacuole	17.69	31.9
KRH63133	Soybean	peroxisome, vacuole	9.35	31.79
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	22.96	29.8
Zm00001d052471_P001	Maize	vacuole	22.28	26.95
Zm00001d034032_P001	Maize	plasma membrane	23.13	25.23
Zm00001d006853_P001	Maize	vacuole	15.31	24.52
Bra015944.1-P	Field mustard	vacuole	17.69	17.42

Protein Annotations

MapMan:15.5.21	Gene3D:2.120.10.30	Gene3D:3.20.90.10	InterPro:6-blade_b-propeller_TolB-like	UniProt:A0A1D6G8B7	ProteinID:AQK99393.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016844
InterPro:IPR011042	InterPro:IPR025659	PFAM:PF01167	PFAM:PF03088	PANTHER:PTHR10426	PANTHER:PTHR10426:SF56
SUPFAM:SSF54518	SUPFAM:SSF63829	SignalP:SignalP-noTM	InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	TMHMM:TMhelix
InterPro:Tubby-like_C	InterPro:Tubby_C	UniParc:UPI0008430F6B	EnsemblPlantsGene:Zm00001d012373	EnsemblPlants:Zm00001d012373_P001	EnsemblPlants:Zm00001d012373_T001
SEG:seg	:	:	:	:	:

Description

Protein STRICTOSIDINE SYNTHASE-LIKE 11

Coordinates

chr8:-:173137855..173147234

Molecular Weight (calculated)

64122.3 Da

IEP (calculated)

9.940

GRAVY (calculated)

-0.135

Length

588 amino acids

Sequence
(BLAST)

001: MGRRSNLATW LLALVVLALA LFARSCAAAQ IKTTDTRWSF QLPLPSGLRG AESLAFDGKG EGPYAGVSDG RVLKWGGTTV GWTTFAHSAN YRKIPLCTAG
101: VVPSEETESM CGRPLGLQFH AKTGDLYIAD AYLGLMRVGP GGGEAEVLAT GAGGAPFHFI NGLDVDQSTG DVYFTDSSAT YPRRFNTEIM MNADATGRLL
201: RYDARTKSVA VLKAGLPYPN GVAVSRDGAH VVVAHTVPCQ AFRYFLSGAR AGQYDLLADL PGYPDNVRRD GKGGYWVALN QEKQRLDAMP ATAPVKHLVG
301: VRLNADGAEV EELTAAKGVT LSDVAEMKGK LWLGSALVLA ISSHPLPTLA AFLASRRDEL LRADITSLLK ALELPGHWEW ALALLRWAGK EGATDASALE
401: LVVRALGREG QHCVLLDEMP LPPSSRLDVS AYTTVLHALE LFAELQRLGY EIKRDKSKTT YHLYLCLTTA VLTENGEFLL SARRNRKTSC TSILSRWMLT
501: TYQDLPTHIG KLRSNFLSTK FMISNMQPPY SGAVVPHAGR TNRRFDSRKV SLRKVSPKLR QVIDLKRHFK RAGKSTALPK YNAQRPAH

Best Arabidopsis Sequence Match ( AT1G08470.1 )
(BLAST)

001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP

Arabidopsis Description

SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.