Factsheet for Zm00001d012375_P001

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012363_P001	Maize	endoplasmic reticulum, extracellular	42.09	96.58
Zm00001d012366_P001	Maize	vacuole	97.01	94.2
Zm00001d012368_P001	Maize	golgi, vacuole	96.42	93.62
Zm00001d012371_P001	Maize	golgi, vacuole	96.42	93.62
Zm00001d012377_P001	Maize	vacuole	96.42	93.62
EES01763	Sorghum	vacuole	91.34	88.7
Zm00001d012252_P001	Maize	vacuole	86.87	84.35
Zm00001d012249_P001	Maize	vacuole	86.27	83.77
Zm00001d029115_P001	Maize	extracellular, vacuole	54.03	77.35
Zm00001d029117_P001	Maize	vacuole	76.72	76.04
Zm00001d029111_P001	Maize	vacuole	76.72	76.04
Zm00001d029108_P001	Maize	vacuole	71.94	76.03
Zm00001d012373_P001	Maize	vacuole	97.01	55.27
Zm00001d020306_P001	Maize	endoplasmic reticulum, vacuole	50.45	49.27
Zm00001d020307_P001	Maize	endoplasmic reticulum, vacuole	28.06	45.63
Zm00001d020308_P001	Maize	cytosol, plastid, vacuole	21.79	45.34
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	41.49	44.84
VIT_13s0074g00070.t01	Wine grape	vacuole	35.22	43.07
VIT_10s0071g00020.t01	Wine grape	vacuole	39.4	42.72
GSMUA_Achr5P05340_001	Banana	vacuole	45.37	42.34
VIT_10s0042g00010.t01	Wine grape	vacuole	39.1	41.59
VIT_00s0575g00010.t01	Wine grape	vacuole	38.51	41.35
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	22.09	40.88
VIT_10s0042g00020.t01	Wine grape	vacuole	38.81	40.37
VIT_13s0074g00080.t01	Wine grape	vacuole	38.21	39.75
VIT_10s0042g00030.t01	Wine grape	vacuole	32.24	39.56
VIT_10s0042g00050.t01	Wine grape	vacuole	37.91	39.44
VIT_00s0575g00020.t01	Wine grape	vacuole	37.91	39.44
PGSC0003DMT400063282	Potato	extracellular, vacuole	18.21	39.35
VIT_10s0071g00250.t01	Wine grape	vacuole	39.4	38.82
VIT_10s0071g00010.t01	Wine grape	vacuole	37.31	38.82
PGSC0003DMT400056839	Potato	vacuole	34.63	37.18
KRH07462	Soybean	vacuole	37.91	36.6
Solyc03g114550.1.1	Tomato	vacuole	29.85	36.5
VIT_17s0000g04600.t01	Wine grape	vacuole	37.01	36.15
CDX73037	Canola	vacuole	35.22	35.98
KRH45407	Soybean	nucleus	37.31	35.82
CDX96505	Canola	vacuole	34.63	35.37
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	24.78	35.32
Solyc12g039070.1.1	Tomato	nucleus	34.93	35.14
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	28.96	35.02
Solyc03g114560.2.1	Tomato	extracellular	33.43	34.25
PGSC0003DMT400063274	Potato	vacuole	34.33	34.23
KRH54773	Soybean	vacuole	34.33	34.12
PGSC0003DMT400063277	Potato	vacuole	33.73	34.04
Solyc03g114530.2.1	Tomato	vacuole	33.73	34.04
AT1G74010.1	Thale cress	vacuole	32.84	33.85
KRH03206	Soybean	vacuole	33.43	33.33
Solyc03g114540.1.1	Tomato	vacuole	33.13	33.04
PGSC0003DMT400063286	Potato	vacuole	32.84	32.93
Bra003820.1-P	Field mustard	vacuole	31.64	32.82
KRH56734	Soybean	vacuole	33.43	32.75
CDY47729	Canola	vacuole	31.64	32.62
CDY47728	Canola	vacuole	31.64	32.42
Bra008126.1-P	Field mustard	vacuole	31.64	32.42
Bra008127.1-P	Field mustard	vacuole	31.64	32.32
Bra008124.1-P	Field mustard	vacuole	31.34	32.31
AT1G74000.1	Thale cress	vacuole	31.64	32.22
CDY45863	Canola	vacuole	31.04	32.0
CDY45861	Canola	vacuole	31.34	31.82
Zm00001d047858_P001	Maize	endoplasmic reticulum, golgi, mitochondrion, vacuole	39.1	31.8
CDY66188	Canola	vacuole	31.04	31.71
AT1G74020.1	Thale cress	vacuole	31.64	31.64
CDX68204	Canola	vacuole	30.75	31.4
CDX96506	Canola	vacuole	30.45	31.38
CDY66189	Canola	vacuole	27.76	31.31
Bra015943.1-P	Field mustard	vacuole	30.45	31.29
CDX96507	Canola	vacuole	30.45	31.29
CDX73038	Canola	vacuole	30.15	31.08
VIT_17s0000g04610.t01	Wine grape	vacuole	34.03	31.06
CDX73039	Canola	vacuole	29.85	30.67
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	40.0	29.58
KRH63133	Soybean	peroxisome, vacuole	15.22	29.48
Zm00001d052471_P001	Maize	vacuole	37.31	25.72
Zm00001d034032_P001	Maize	plasma membrane	39.1	24.3
Zm00001d006853_P001	Maize	vacuole	25.37	23.16
Bra015944.1-P	Field mustard	vacuole	29.85	16.75

Protein Annotations

Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	UniProt:A0A1D6G8B8	ProteinID:AQK99394.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:IPR011042
PFAM:PF03088	PANTHER:PTHR10426	PANTHER:PTHR10426:SF56	SUPFAM:SSF63829	SignalP:SignalP-noTM	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	TMHMM:TMhelix	UniParc:UPI0008443B43	EnsemblPlantsGene:Zm00001d012375	EnsemblPlants:Zm00001d012375_P001	EnsemblPlants:Zm00001d012375_T001
SEG:seg	:	:	:	:	:

Description

Protein STRICTOSIDINE SYNTHASE-LIKE 11

Coordinates

chr8:-:173198224..173199228

Molecular Weight (calculated)

35537.2 Da

IEP (calculated)

7.127

GRAVY (calculated)

-0.083

Length

335 amino acids

Sequence
(BLAST)

001: MASSMGRRSN LATWLLALVV LALALFARSC AAAQIKTTDT RWSFQLPLPS GLRGAESLAF DGKGEGPYAG VSDGRVLKWG GTTVGWTTFA HSANYRKIPL
101: YTAGVVPSEE TESMCGRPLG LQFHAKTGDL YIADAYLGLM RVGPGGGEAE VLATGAGGAP FHFVNGLDVD QSTGDVYFTD SSATYPRRFN TEIMMNADAT
201: GRLLRYDAQT NSVAVLKAGL PYPNGVAVSR DGAHVVVAHT VPCQAFRYFL SGARAGQYDL LADLPGYPDN VRRDGNGGYW VALNQEKQRL DATPATAPVK
301: HLVGVRLNAD GAEVEELTAA KGVTLSDVAE MKGKL

Best Arabidopsis Sequence Match ( AT3G57030.1 )
(BLAST)

001: MTMMIITVFL TVIAAVLAIL VKNSQTGSGI FAPPEISGSR DVFPSAKVVN LTGASGPESI AFDPAGEGPY VGVSDGRILK WRGEPLGWSD FAHTSSNRQE
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL

Arabidopsis Description

SSL10Protein STRICTOSIDINE SYNTHASE-LIKE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3D9]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.