Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d012375_P001 | Maize | vacuole | 96.58 | 42.09 |
| Zm00001d012377_P001 | Maize | vacuole | 99.32 | 42.03 |
| Zm00001d012366_P001 | Maize | vacuole | 97.95 | 41.45 |
| Zm00001d012368_P001 | Maize | golgi, vacuole | 96.58 | 40.87 |
| Zm00001d012371_P001 | Maize | golgi, vacuole | 96.58 | 40.87 |
| Zm00001d012252_P001 | Maize | vacuole | 85.62 | 36.23 |
| Zm00001d012249_P001 | Maize | vacuole | 84.93 | 35.94 |
| PGSC0003DMT400063282 | Potato | extracellular, vacuole | 36.3 | 34.19 |
| Zm00001d029108_P001 | Maize | vacuole | 71.23 | 32.81 |
| Zm00001d029117_P001 | Maize | vacuole | 71.23 | 30.77 |
| Zm00001d029111_P001 | Maize | vacuole | 71.23 | 30.77 |
| Zm00001d020307_P001 | Maize | endoplasmic reticulum, vacuole | 43.15 | 30.58 |
| VIT_17s0000g04580.t01 | Wine grape | extracellular, vacuole | 35.62 | 28.73 |
| Zm00001d012373_P001 | Maize | vacuole | 97.26 | 24.15 |
| VIT_13s0074g00070.t01 | Wine grape | vacuole | 39.04 | 20.8 |
| VIT_10s0042g00030.t01 | Wine grape | vacuole | 37.67 | 20.15 |
| Zm00001d020306_P001 | Maize | endoplasmic reticulum, vacuole | 46.58 | 19.83 |
| VIT_10s0071g00020.t01 | Wine grape | vacuole | 39.73 | 18.77 |
| GSMUA_Achr5P05340_001 | Banana | vacuole | 45.89 | 18.66 |
| VIT_10s0071g00250.t01 | Wine grape | vacuole | 43.15 | 18.53 |
| VIT_00s0575g00010.t01 | Wine grape | vacuole | 39.04 | 18.27 |
| Solyc03g114550.1.1 | Tomato | vacuole | 34.25 | 18.25 |
| VIT_10s0042g00010.t01 | Wine grape | vacuole | 38.36 | 17.78 |
| KRH07462 | Soybean | vacuole | 41.78 | 17.58 |
| GSMUA_Achr3P06240_001 | Banana | cytosol, mitochondrion, peroxisome, vacuole | 36.99 | 17.42 |
| VIT_10s0042g00050.t01 | Wine grape | vacuole | 38.36 | 17.39 |
| VIT_10s0042g00020.t01 | Wine grape | vacuole | 38.36 | 17.39 |
| VIT_00s0575g00020.t01 | Wine grape | vacuole | 38.36 | 17.39 |
| VIT_13s0074g00080.t01 | Wine grape | vacuole | 38.36 | 17.39 |
| KRH45407 | Soybean | nucleus | 41.1 | 17.19 |
| VIT_10s0071g00010.t01 | Wine grape | vacuole | 36.99 | 16.77 |
| PGSC0003DMT400063274 | Potato | vacuole | 38.36 | 16.67 |
| CDX73037 | Canola | vacuole | 36.99 | 16.46 |
| PGSC0003DMT400056839 | Potato | vacuole | 34.93 | 16.35 |
| VIT_17s0000g04600.t01 | Wine grape | vacuole | 38.36 | 16.33 |
| KRH54773 | Soybean | vacuole | 37.67 | 16.32 |
| Solyc03g114560.2.1 | Tomato | extracellular | 36.3 | 16.21 |
| CDY66189 | Canola | vacuole | 32.88 | 16.16 |
| CDX96505 | Canola | vacuole | 36.3 | 16.16 |
| Solyc03g114540.1.1 | Tomato | vacuole | 36.99 | 16.07 |
| VIT_17s0000g04610.t01 | Wine grape | vacuole | 39.73 | 15.8 |
| PGSC0003DMT400063286 | Potato | vacuole | 35.62 | 15.57 |
| PGSC0003DMT400063277 | Potato | vacuole | 34.93 | 15.36 |
| KRH03206 | Soybean | vacuole | 34.93 | 15.18 |
| Solyc03g114530.2.1 | Tomato | vacuole | 34.25 | 15.06 |
| KRH56734 | Soybean | vacuole | 34.93 | 14.91 |
| Bra003820.1-P | Field mustard | vacuole | 32.88 | 14.86 |
| Solyc12g039070.1.1 | Tomato | nucleus | 33.56 | 14.71 |
| CDY66188 | Canola | vacuole | 32.88 | 14.63 |
| CDX68204 | Canola | vacuole | 32.88 | 14.63 |
| AT1G74010.1 | Thale cress | vacuole | 32.19 | 14.46 |
| Zm00001d047858_P001 | Maize | endoplasmic reticulum, golgi, mitochondrion, vacuole | 40.41 | 14.32 |
| AT1G74000.1 | Thale cress | vacuole | 32.19 | 14.29 |
| CDY47728 | Canola | vacuole | 31.51 | 14.07 |
| Bra008126.1-P | Field mustard | vacuole | 31.51 | 14.07 |
| VIT_17s0000g04590.t01 | Wine grape | endoplasmic reticulum, peroxisome, vacuole | 43.15 | 13.91 |
| Bra008124.1-P | Field mustard | vacuole | 30.82 | 13.85 |
| CDY45863 | Canola | vacuole | 30.82 | 13.85 |
| CDY47729 | Canola | vacuole | 30.82 | 13.85 |
| AT1G74020.1 | Thale cress | vacuole | 31.51 | 13.73 |
| Bra008127.1-P | Field mustard | vacuole | 30.82 | 13.72 |
| CDX96507 | Canola | vacuole | 30.14 | 13.5 |
| Bra015943.1-P | Field mustard | vacuole | 30.14 | 13.5 |
| CDY45861 | Canola | vacuole | 30.14 | 13.33 |
| CDX73039 | Canola | vacuole | 29.45 | 13.19 |
| Zm00001d029115_P001 | Maize | extracellular, vacuole | 20.55 | 12.82 |
| CDX96506 | Canola | vacuole | 28.08 | 12.62 |
| CDX73038 | Canola | vacuole | 27.4 | 12.31 |
| PGSC0003DMT400001736 | Potato | cytosol, peroxisome, vacuole | 21.92 | 11.55 |
| Zm00001d052471_P001 | Maize | vacuole | 36.99 | 11.11 |
| Zm00001d034032_P001 | Maize | plasma membrane | 39.73 | 10.76 |
| Bra008125.1-P | Field mustard | cytosol, peroxisome, vacuole | 15.07 | 9.36 |
| Zm00001d006853_P001 | Maize | vacuole | 19.18 | 7.63 |
| Bra015944.1-P | Field mustard | vacuole | 28.08 | 6.87 |
| Zm00001d020308_P001 | Maize | cytosol, plastid, vacuole | 0.0 | 0.0 |
| KRH63133 | Soybean | peroxisome, vacuole | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Zm00001d012363_P001 | EnsemblPlants:Zm00001d012363_T001 | EnsemblPlantsGene:Zm00001d012363 | Gene3D:2.120.10.30 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016844 | InterPro:6-blade_b-propeller_TolB-like | InterPro:IPR011042 |
| InterPro:Strictosidine_synthase | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF56 | ProteinID:AQK99386.1 | SEG:seg | SignalP:SignalP-noTM |
| SUPFAM:SSF63829 | TMHMM:TMhelix | UniParc:UPI000844E768 | UniProt:A0A1D6G8B0 | MapMan:50.4.3 | : |
Description
Protein STRICTOSIDINE SYNTHASE-LIKE 11
Coordinates
chr8:-:173029321..173031464
Molecular Weight (calculated)
15513.7 Da
IEP (calculated)
8.482
GRAVY (calculated)
0.073
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRRSNLATW LLALVVLALA LFARPCAAAQ IKTTDTRWSF QLPLPSGLRG AESLAFDGKG EGPYAGVSDG RVLKWGGTTV GWTTFAHSVN YRKIPLCTAG
101: VVPSEEIESM CGRPLGLQFH TKTGDLYIAD AYLGLMRVGP GGGEAE
101: VVPSEEIESM CGRPLGLQFH TKTGDLYIAD AYLGLMRVGP GGGEAE
001: MTMMIITVFL TVIAAVLAIL VKNSQTGSGI FAPPEISGSR DVFPSAKVVN LTGASGPESI AFDPAGEGPY VGVSDGRILK WRGEPLGWSD FAHTSSNRQE
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL
Arabidopsis Description
SSL10Protein STRICTOSIDINE SYNTHASE-LIKE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3D9]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.