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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 8
  • plasma membrane 5
  • golgi 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:cytosol, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY45861 Canola vacuole 92.99 92.42
AT1G74020.1 Thale cress vacuole 91.77 89.85
Bra008125.1-P Field mustard cytosol, peroxisome, vacuole 57.01 79.57
Bra008126.1-P Field mustard vacuole 78.35 78.59
Bra015943.1-P Field mustard vacuole 78.05 78.53
Bra008124.1-P Field mustard vacuole 75.91 76.62
Bra003820.1-P Field mustard vacuole 69.51 70.59
VIT_17s0000g04600.t01 Wine grape vacuole 45.12 43.15
PGSC0003DMT400056839 Potato vacuole 39.94 41.99
PGSC0003DMT400063282 Potato extracellular, vacuole 19.21 40.65
Bra015944.1-P Field mustard vacuole 73.78 40.54
KRH54773 Soybean vacuole 40.85 39.76
Solyc03g114550.1.1 Tomato vacuole 32.93 39.42
PGSC0003DMT400001736 Potato cytosol, peroxisome, vacuole 33.23 39.35
Solyc03g114560.2.1 Tomato extracellular 39.02 39.14
Solyc12g039070.1.1 Tomato nucleus 39.63 39.04
PGSC0003DMT400063277 Potato vacuole 39.33 38.86
KRH63133 Soybean peroxisome, vacuole 20.43 38.73
PGSC0003DMT400063286 Potato vacuole 39.33 38.62
Zm00001d029115_P001 Maize extracellular, vacuole 27.44 38.46
Solyc03g114540.1.1 Tomato vacuole 39.33 38.39
KRH03206 Soybean vacuole 39.02 38.1
GSMUA_Achr3P06240_001 Banana cytosol, mitochondrion, peroxisome, vacuole 35.67 37.74
Solyc03g114530.2.1 Tomato vacuole 38.11 37.65
KRH56734 Soybean vacuole 39.02 37.43
PGSC0003DMT400063274 Potato vacuole 37.8 36.9
TraesCS3B01G289800.1 Wheat vacuole 36.59 35.71
HORVU3Hr1G065520.3 Barley extracellular 34.45 35.09
TraesCS5B01G195300.1 Wheat endoplasmic reticulum, extracellular, vacuole 36.89 34.97
TraesCS5B01G382800.1 Wheat vacuole 36.28 34.9
TraesCS3A01G256600.1 Wheat vacuole 35.67 34.82
GSMUA_Achr5P05340_001 Banana vacuole 38.11 34.82
TraesCS5B01G383000.1 Wheat vacuole 35.98 34.81
Zm00001d020306_P001 Maize endoplasmic reticulum, vacuole 36.28 34.69
HORVU5Hr1G058910.2 Barley endoplasmic reticulum, extracellular, vacuole 36.59 34.68
HORVU6Hr1G026020.1 Barley cytosol 26.22 34.68
OQU75879 Sorghum vacuole 32.32 34.64
Os01t0698200-00 Rice mitochondrion 30.49 34.48
TraesCS5D01G202700.1 Wheat vacuole 36.28 34.39
Bra007294.1-P Field mustard vacuole 39.02 34.22
HORVU5Hr1G093840.1 Barley vacuole 35.37 34.22
TraesCS3A01G298200.1 Wheat cytosol 32.93 34.07
HORVU2Hr1G013460.2 Barley golgi, mitochondrion, vacuole 30.18 34.02
TraesCS3D01G503900.1 Wheat nucleus 32.01 33.76
EER96671 Sorghum endoplasmic reticulum, golgi 35.98 33.71
Bra000222.1-P Field mustard cytosol 35.37 33.62
TraesCS5D01G389100.1 Wheat plastid, vacuole 36.28 33.52
Zm00001d029117_P001 Maize vacuole 34.45 33.43
TraesCS3D01G256900.1 Wheat mitochondrion, plastid 36.28 33.33
HORVU3Hr1G109810.1 Barley golgi, vacuole 35.37 33.24
TraesCS3B01G559000.1 Wheat cytosol 18.9 33.16
Zm00001d029111_P001 Maize vacuole 34.15 33.14
HORVU2Hr1G064060.1 Barley mitochondrion, vacuole 25.61 33.07
TraesCS3A01G496700.1 Wheat golgi, vacuole 34.76 33.04
TraesCS3D01G504000.1 Wheat vacuole 34.76 33.04
KXG39404 Sorghum golgi, vacuole 34.15 32.84
TraesCS3B01G559100.1 Wheat vacuole 34.45 32.75
TraesCS7D01G075900.1 Wheat vacuole 34.45 32.75
TraesCS2B01G092900.1 Wheat golgi, vacuole 34.15 32.75
TraesCS2B01G093000.1 Wheat golgi, vacuole 34.15 32.65
TraesCS2D01G076200.1 Wheat vacuole 34.15 32.65
TraesCS3B01G558800.1 Wheat cytosol 20.73 32.54
TraesCS1A01G026500.1 Wheat vacuole 34.15 32.46
EER90208 Sorghum vacuole 34.15 32.37
EES05895 Sorghum golgi, vacuole 34.15 32.37
EES07680 Sorghum golgi, vacuole 34.15 32.37
TraesCS2A01G078000.1 Wheat vacuole 33.84 32.36
TraesCS3B01G338500.1 Wheat extracellular, golgi, vacuole 33.84 32.36
Zm00001d020308_P001 Maize cytosol, plastid, vacuole 15.85 32.3
HORVU2Hr1G012970.2 Barley mitochondrion 34.45 32.29
TraesCS3A01G496900.1 Wheat vacuole 34.45 32.29
TraesCS7D01G076000.1 Wheat vacuole 33.54 32.26
TraesCS3D01G303900.1 Wheat cytosol 31.4 32.19
Zm00001d029108_P001 Maize vacuole 31.1 32.18
EES01763 Sorghum vacuole 33.84 32.17
TraesCSU01G223800.1 Wheat vacuole 33.84 32.17
Zm00001d012249_P001 Maize vacuole 33.84 32.17
Zm00001d012366_P001 Maize vacuole 33.84 32.17
Zm00001d012368_P001 Maize golgi, vacuole 33.84 32.17
TraesCS2D01G076000.1 Wheat golgi, vacuole 33.54 32.07
TraesCS7D01G076600.1 Wheat cytosol 20.43 32.06
Os08t0175000-00 Rice golgi, mitochondrion, vacuole 34.76 32.02
EES01841 Sorghum vacuole 33.84 31.99
OQU87434 Sorghum golgi, vacuole 34.45 31.92
Zm00001d012252_P001 Maize vacuole 33.54 31.88
Zm00001d012371_P001 Maize golgi, vacuole 33.54 31.88
Zm00001d012377_P001 Maize vacuole 33.54 31.88
OQU85880 Sorghum golgi, vacuole 33.54 31.79
TraesCS2D01G076300.1 Wheat vacuole 33.54 31.79
TraesCS2D01G076400.1 Wheat vacuole 33.23 31.78
TraesCSU01G189700.1 Wheat vacuole 33.23 31.78
Os07t0543600-00 Rice golgi, vacuole 33.84 31.71
Zm00001d012375_P001 Maize vacuole 32.32 31.64
OQU79673 Sorghum vacuole 32.93 31.58
Os08t0442200-01 Rice extracellular 33.54 31.43
TraesCS5A01G188200.1 Wheat vacuole 34.76 31.41
Bra018623.1-P Field mustard cytosol 33.54 31.34
TraesCS7D01G076300.1 Wheat vacuole 34.45 31.3
EES05427 Sorghum vacuole 32.62 31.1
TraesCS7A01G138300.1 Wheat cytosol 19.82 31.1
TraesCS5B01G195400.1 Wheat vacuole 34.45 31.04
TraesCS5D01G202800.1 Wheat golgi, vacuole 34.45 31.04
TraesCS5A01G188300.1 Wheat extracellular, plasma membrane, vacuole 35.67 31.03
Bra004613.1-P Field mustard vacuole 35.37 30.93
HORVU7Hr1G028550.2 Barley plastid 16.77 30.9
Os06t0623700-01 Rice golgi, vacuole 32.93 30.86
Zm00001d012363_P001 Maize endoplasmic reticulum, extracellular 13.72 30.82
TraesCS2B01G281700.1 Wheat golgi, vacuole 32.32 30.81
TraesCSU01G240600.1 Wheat cytosol 17.68 30.69
TraesCSU01G255900.1 Wheat cytosol 17.68 30.69
TraesCS7A01G138700.1 Wheat cytosol 19.51 30.62
TraesCS7D01G076500.1 Wheat cytosol 17.68 30.53
EES17427 Sorghum golgi, vacuole 31.71 30.32
EES17425 Sorghum extracellular 24.09 30.15
HORVU5Hr1G058940.2 Barley vacuole 33.54 29.97
HORVU5Hr1G078340.1 Barley golgi, vacuole 22.26 29.92
TraesCS7B01G040900.1 Wheat golgi, vacuole 31.71 29.89
TraesCS7D01G139900.1 Wheat vacuole 31.71 29.89
Bra004614.1-P Field mustard vacuole 33.54 29.81
EER96672 Sorghum vacuole 33.23 29.78
Zm00001d020307_P001 Maize endoplasmic reticulum, vacuole 18.6 29.61
TraesCS7B01G040400.1 Wheat golgi, vacuole 31.4 29.6
TraesCS7D01G140000.1 Wheat golgi, vacuole 31.4 29.6
TraesCSU01G104000.1 Wheat golgi, vacuole 31.4 29.6
TraesCS7D01G140500.1 Wheat golgi, vacuole 31.1 29.57
Bra014655.1-P Field mustard endoplasmic reticulum, golgi 34.15 29.4
OQU76676 Sorghum extracellular, golgi, vacuole 30.79 29.19
TraesCS5B01G330900.1 Wheat extracellular, vacuole 16.46 29.19
Bra000223.1-P Field mustard vacuole 32.62 29.0
TraesCS7A01G138800.1 Wheat golgi, vacuole 26.52 28.52
HORVU5Hr1G091230.1 Barley golgi, mitochondrion, plastid, vacuole 30.79 28.37
HORVU7Hr1G028580.1 Barley golgi, vacuole 30.18 28.12
HORVU3Hr1G074780.3 Barley cytosol, vacuole 32.01 28.07
Os09t0374900-00 Rice cytosol, golgi, plastid, vacuole 32.62 28.01
TraesCS7D01G140600.1 Wheat endoplasmic reticulum, plasma membrane 25.61 27.36
Bra034344.1-P Field mustard vacuole 30.79 27.3
TraesCS2A01G260200.1 Wheat mitochondrion, vacuole 28.66 27.17
Bra007293.1-P Field mustard vacuole 30.49 27.1
Bra003263.1-P Field mustard vacuole 30.49 27.03
TraesCS1A01G437900.1 Wheat cytosol 15.24 26.88
Bra002383.1-P Field mustard vacuole 32.32 26.84
Bra014652.1-P Field mustard extracellular, golgi, vacuole 30.18 26.76
HORVU5Hr1G009400.2 Barley cytosol, mitochondrion, plastid, vacuole 10.67 25.74
Bra014536.1-P Field mustard vacuole 31.1 24.64
Bra007457.1-P Field mustard golgi, vacuole 29.88 23.73
Bra038899.1-P Field mustard golgi, vacuole 23.78 21.02
HORVU4Hr1G016850.1 Barley cytosol 10.37 19.54
Zm00001d012373_P001 Maize vacuole 33.54 18.71
Bra038898.1-P Field mustard golgi, vacuole 22.56 18.64
Bra036798.1-P Field mustard vacuole 23.17 18.36
Protein Annotations
EnsemblPlants:Bra008127.1EnsemblPlants:Bra008127.1-PEnsemblPlantsGene:Bra008127Gene3D:2.120.10.30GO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0016844InterPro:6-blade_b-propeller_TolB-likeInterPro:IPR011042
InterPro:Strictosidine_synth_cons-regInterPro:Strictosidine_synthasePANTHER:PTHR10426PANTHER:PTHR10426:SF59PFAM:PF03088SEG:seg
SignalP:SignalP-noTMSUPFAM:SSF63829UniParc:UPI000254578CUniProt:M4CV81MapMan:50.4.3:
Description
AT1G74020 (E=3e-167) SS2 | SS2 (STRICTOSIDINE SYNTHASE 2); strictosidine synthase
Coordinates
chrA02:-:13293765..13299713
Molecular Weight (calculated)
34658.3 Da
IEP (calculated)
5.424
GRAVY (calculated)
0.142
Length
328 amino acids
Sequence
(BLAST)
001: MMSFFSIISL LLLLFSLSSV VISDGESFRK LPVPENRSGP EAFAFDSTGK GFYTGVSGGK ILKYTPETGY VDFAQITESS NSSWCDGVVG TALAGRCGRP
101: AGIAFNEKTG ELYVADAPLG LHVVSPAGGL AVKIADSVDG KPFKFLDGLD VDPTTGVVYF TSFSSRYTPI QVLIALGLKD ATGKLFKYDP STKVVTVLME
201: GLSGSAGCAV SSDGSFVLVS QFTKSNIKRY WIKGPKAGSS EDFTNSVSNP DNIKRIGSTG NFWIASVVNK IVVPTNPSAV KVNSNGEVLQ TIPLKDQFGD
301: TLLSEVNEFD GSLYIGTLTG PFAGVLKL
Best Arabidopsis Sequence Match ( AT1G74020.1 )
(BLAST)
001: MTSFCSMISL LLLLSLSSAV FSDDASFQKL PVPETRSGPE AFAFDSTGKG FYTGVSGGKI LKYLPETGYV DFAQITESSN SSWCDGTIGT ALAGRCGRPA
101: GIAFNEKTGD LYVADAPLGL HVISPAGGLA TKITDSVDGK PFKFLDGLDV DPTTGVVYFT SFSSRFSPIQ VLIALGLKDA TGKLYKYDPS TKVVTVLMEG
201: LSGSAGCAVS SDGSFVLVSQ FTKSNIKRYW IKGPKAGSSE DFTNSVSNPD NIKRIGSTGN FWVASVVNKI IVPTNPSAVK VNSNGEVLQT IPLKDKFGDT
301: LLSEVNEFEG NLYIGTLTGP FAGILKLEKG SCPAT
Arabidopsis Description
SSL12Protein STRICTOSIDINE SYNTHASE-LIKE 12 [Source:UniProtKB/Swiss-Prot;Acc:P94111]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.