Factsheet for TraesCS3D01G504000.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G503900.1	Wheat	nucleus	83.48	92.6
HORVU3Hr1G109810.1	Barley	golgi, vacuole	90.43	89.4
TraesCS7D01G076600.1	Wheat	cytosol	53.91	89.0
TraesCS7D01G076500.1	Wheat	cytosol	48.12	87.37
TraesCS7D01G075900.1	Wheat	vacuole	86.96	86.96
TraesCS7D01G076000.1	Wheat	vacuole	81.74	82.7
HORVU5Hr1G078340.1	Barley	golgi, vacuole	55.94	79.1
TraesCS3D01G303900.1	Wheat	cytosol	69.28	74.69
TraesCS7D01G140500.1	Wheat	golgi, vacuole	70.72	70.72
TraesCS7D01G140000.1	Wheat	golgi, vacuole	71.3	70.69
TraesCS7D01G139900.1	Wheat	vacuole	70.43	69.83
EES07680	Sorghum	golgi, vacuole	69.28	69.08
EES05895	Sorghum	golgi, vacuole	68.99	68.79
OQU85880	Sorghum	golgi, vacuole	68.7	68.5
EER90208	Sorghum	vacuole	68.7	68.5
EES05427	Sorghum	vacuole	67.54	67.73
TraesCS7D01G140600.1	Wheat	endoplasmic reticulum, plasma membrane	59.42	66.78
Os07t0543600-00	Rice	golgi, vacuole	66.38	65.43
TraesCS2D01G076000.1	Wheat	golgi, vacuole	51.01	51.31
TraesCS2D01G076200.1	Wheat	vacuole	50.72	51.02
TraesCS2D01G076400.1	Wheat	vacuole	50.43	50.73
TraesCS2D01G076300.1	Wheat	vacuole	49.57	49.42
TraesCS3D01G256900.1	Wheat	mitochondrion, plastid	50.72	49.02
TraesCS5D01G389100.1	Wheat	plastid, vacuole	50.43	49.01
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	43.19	48.06
TraesCS5D01G202700.1	Wheat	vacuole	48.12	47.98
TraesCS5D01G202800.1	Wheat	golgi, vacuole	49.57	46.98
GSMUA_Achr5P05340_001	Banana	vacuole	48.12	46.24
TraesCS7D01G076300.1	Wheat	vacuole	46.67	44.6
VIT_13s0074g00070.t01	Wine grape	vacuole	34.2	43.07
VIT_10s0042g00010.t01	Wine grape	vacuole	38.55	42.22
VIT_00s0575g00010.t01	Wine grape	vacuole	37.97	41.99
VIT_10s0042g00030.t01	Wine grape	vacuole	33.04	41.76
VIT_10s0042g00020.t01	Wine grape	vacuole	38.55	41.3
VIT_00s0575g00020.t01	Wine grape	vacuole	38.55	41.3
VIT_13s0074g00080.t01	Wine grape	vacuole	38.55	41.3
VIT_10s0071g00020.t01	Wine grape	vacuole	36.52	40.78
VIT_10s0042g00050.t01	Wine grape	vacuole	37.97	40.68
VIT_10s0071g00010.t01	Wine grape	vacuole	37.68	40.37
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	20.58	39.23
KRH07462	Soybean	vacuole	38.84	38.62
PGSC0003DMT400056839	Potato	vacuole	33.62	37.18
KRH45407	Soybean	nucleus	37.39	36.96
PGSC0003DMT400063282	Potato	extracellular, vacuole	16.52	36.77
VIT_10s0071g00250.t01	Wine grape	vacuole	36.23	36.76
Bra003820.1-P	Field mustard	vacuole	33.62	35.91
AT1G74010.1	Thale cress	vacuole	33.62	35.69
CDX96505	Canola	vacuole	33.91	35.67
CDX73037	Canola	vacuole	33.91	35.67
Solyc12g039070.1.1	Tomato	nucleus	33.91	35.14
VIT_17s0000g04600.t01	Wine grape	vacuole	34.78	34.99
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	23.77	34.89
Solyc03g114560.2.1	Tomato	extracellular	33.04	34.86
CDY45861	Canola	vacuole	33.33	34.85
Bra008127.1-P	Field mustard	vacuole	33.04	34.76
CDY66189	Canola	vacuole	29.86	34.68
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	27.83	34.66
KRH56734	Soybean	vacuole	34.2	34.5
AT1G74000.1	Thale cress	vacuole	32.75	34.35
PGSC0003DMT400063277	Potato	vacuole	33.04	34.34
AT1G74020.1	Thale cress	vacuole	33.33	34.33
CDY47728	Canola	vacuole	32.46	34.25
Bra008126.1-P	Field mustard	vacuole	32.46	34.25
Solyc03g114550.1.1	Tomato	vacuole	26.96	33.94
KRH03206	Soybean	vacuole	33.04	33.93
CDX96506	Canola	vacuole	31.88	33.85
CDX68204	Canola	vacuole	32.17	33.84
Solyc03g114540.1.1	Tomato	vacuole	32.75	33.63
CDX73038	Canola	vacuole	31.59	33.54
CDY47729	Canola	vacuole	31.59	33.54
CDY66188	Canola	vacuole	31.88	33.54
PGSC0003DMT400063286	Potato	vacuole	32.46	33.53
KRH54773	Soybean	vacuole	32.75	33.53
TraesCS5D01G139700.1	Wheat	vacuole	36.23	33.51
Solyc03g114530.2.1	Tomato	vacuole	32.17	33.43
TraesCS5D01G400000.1	Wheat	golgi	38.55	33.42
Bra008124.1-P	Field mustard	vacuole	31.3	33.23
PGSC0003DMT400063274	Potato	vacuole	32.17	33.04
CDY45863	Canola	vacuole	31.01	32.92
CDX96507	Canola	vacuole	31.01	32.82
Bra015943.1-P	Field mustard	vacuole	31.01	32.82
CDX73039	Canola	vacuole	30.72	32.52
VIT_17s0000g04610.t01	Wine grape	vacuole	34.49	32.43
TraesCS4D01G215800.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	35.36	29.54
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	37.1	28.26
KRH63133	Soybean	peroxisome, vacuole	13.91	27.75
TraesCS1D01G207200.2	Wheat	extracellular, golgi, vacuole	28.7	26.98
TraesCS2D01G177900.2	Wheat	golgi	26.09	24.66
TraesCS2D01G177700.1	Wheat	plasma membrane, vacuole	25.51	23.98
Bra015944.1-P	Field mustard	vacuole	31.3	18.09

Protein Annotations

EnsemblPlants:TraesCS3D01G504000.1	EnsemblPlantsGene:TraesCS3D01G504000	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF28	PFAM:PF03088	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF63829	TMHMM:TMhelix	MapMan:50.4.3	:	:	:

Description

No Description!

Coordinates

chr3D:-:591653794..591654831

Molecular Weight (calculated)

37709.1 Da

IEP (calculated)

9.605

GRAVY (calculated)

-0.414

Length

345 amino acids

Sequence
(BLAST)

001: MGCSMSRLLK TTVTLIILVL LLMPGALAAT SFDASRSQQL PLPRGTVHGP ESVAFDGQGQ GPYSGVSDGR ILKWNGEKLG WTTYAYGPGY DSRTCTPSKF
101: SPETETARES RCGRPLGLRF NQKSGDLYVA DAYKGLMRVA PGGGEATVLV NQVDGFPLRF TNGVDVDQVT GQVYFTDSSM NYQRSQHEMV TRTGDSTGRL
201: MRYDPRTSDV TVLQAGMTYP NGVALSADRT HLVVASTGPC KLLRHWIKGV NAGTSEPFAD LPGYPDNVRP DTKGGYWVAL HREKNELPFG RDSHRLAVRV
301: GNDGKIVEEM RGPKKVRPTE IMERANGKIY LGSVELPYVG VVKRK

Best Arabidopsis Sequence Match ( AT1G08470.1 )
(BLAST)

001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP

Arabidopsis Description

SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.