Factsheet for TraesCS2D01G076300.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G076000.1	Wheat	golgi, vacuole	85.26	86.01
TraesCS2D01G076200.1	Wheat	vacuole	84.97	85.71
TraesCS2D01G076400.1	Wheat	vacuole	83.24	83.97
HORVU2Hr1G013460.2	Barley	golgi, mitochondrion, vacuole	69.08	82.13
Zm00001d029115_P001	Maize	extracellular, vacuole	51.73	76.5
Zm00001d029108_P001	Maize	vacuole	67.34	73.5
Zm00001d029117_P001	Maize	vacuole	71.39	73.08
Zm00001d029111_P001	Maize	vacuole	71.39	73.08
KXG39404	Sorghum	golgi, vacuole	71.1	72.14
OQU75879	Sorghum	vacuole	61.85	69.93
Os08t0175000-00	Rice	golgi, mitochondrion, vacuole	71.68	69.66
TraesCS3D01G256900.1	Wheat	mitochondrion, plastid	67.92	65.83
TraesCS5D01G389100.1	Wheat	plastid, vacuole	67.05	65.35
Os08t0442200-01	Rice	extracellular	62.43	61.71
TraesCS3D01G303900.1	Wheat	cytosol	47.11	50.94
TraesCS7D01G076600.1	Wheat	cytosol	30.35	50.24
TraesCS3D01G504000.1	Wheat	vacuole	49.42	49.57
TraesCS7D01G075900.1	Wheat	vacuole	49.13	49.28
TraesCS5D01G202700.1	Wheat	vacuole	49.13	49.13
TraesCS3D01G503900.1	Wheat	nucleus	43.93	48.87
TraesCS7D01G139900.1	Wheat	vacuole	48.27	47.99
TraesCS7D01G140000.1	Wheat	golgi, vacuole	47.98	47.7
TraesCS7D01G140500.1	Wheat	golgi, vacuole	47.4	47.54
TraesCS7D01G076000.1	Wheat	vacuole	46.82	47.51
TraesCS7D01G076500.1	Wheat	cytosol	26.01	47.37
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	42.2	47.1
TraesCS7D01G140600.1	Wheat	endoplasmic reticulum, plasma membrane	41.33	46.58
TraesCS7D01G076300.1	Wheat	vacuole	47.4	45.43
VIT_10s0042g00010.t01	Wine grape	vacuole	41.04	45.08
TraesCS5D01G202800.1	Wheat	golgi, vacuole	47.11	44.78
VIT_00s0575g00010.t01	Wine grape	vacuole	40.17	44.55
GSMUA_Achr5P05340_001	Banana	vacuole	45.95	44.29
VIT_13s0074g00070.t01	Wine grape	vacuole	34.97	44.16
VIT_10s0071g00020.t01	Wine grape	vacuole	39.31	44.01
VIT_10s0042g00020.t01	Wine grape	vacuole	40.75	43.79
VIT_10s0042g00050.t01	Wine grape	vacuole	40.46	43.48
VIT_00s0575g00020.t01	Wine grape	vacuole	40.17	43.17
VIT_10s0071g00010.t01	Wine grape	vacuole	39.88	42.86
VIT_13s0074g00080.t01	Wine grape	vacuole	39.6	42.55
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	22.25	42.54
VIT_10s0042g00030.t01	Wine grape	vacuole	32.37	41.03
PGSC0003DMT400056839	Potato	vacuole	35.26	39.1
VIT_17s0000g04600.t01	Wine grape	vacuole	38.73	39.07
PGSC0003DMT400063282	Potato	extracellular, vacuole	17.34	38.71
KRH07462	Soybean	vacuole	38.44	38.33
VIT_10s0071g00250.t01	Wine grape	vacuole	36.99	37.65
KRH45407	Soybean	nucleus	37.86	37.54
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	29.48	36.82
TraesCS5D01G400000.1	Wheat	golgi	42.2	36.68
Solyc12g039070.1.1	Tomato	nucleus	34.68	36.04
Solyc03g114560.2.1	Tomato	extracellular	33.81	35.78
AT1G74010.1	Thale cress	vacuole	33.53	35.69
Solyc03g114550.1.1	Tomato	vacuole	28.03	35.4
CDX73037	Canola	vacuole	33.53	35.37
PGSC0003DMT400063274	Potato	vacuole	34.1	35.12
Bra003820.1-P	Field mustard	vacuole	32.66	34.98
Solyc03g114530.2.1	Tomato	vacuole	33.53	34.94
PGSC0003DMT400063277	Potato	vacuole	33.53	34.94
Solyc03g114540.1.1	Tomato	vacuole	33.53	34.52
PGSC0003DMT400063286	Potato	vacuole	33.24	34.43
KRH03206	Soybean	vacuole	33.24	34.23
CDX96505	Canola	vacuole	32.37	34.15
VIT_17s0000g04610.t01	Wine grape	vacuole	35.84	33.79
Bra008126.1-P	Field mustard	vacuole	31.79	33.64
CDY47728	Canola	vacuole	31.79	33.64
CDY45861	Canola	vacuole	32.08	33.64
KRH56734	Soybean	vacuole	33.24	33.63
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	22.83	33.62
CDY66188	Canola	vacuole	31.79	33.54
CDX68204	Canola	vacuole	31.79	33.54
Bra008127.1-P	Field mustard	vacuole	31.79	33.54
CDX96506	Canola	vacuole	31.21	33.23
AT1G74020.1	Thale cress	vacuole	32.08	33.13
AT1G74000.1	Thale cress	vacuole	31.5	33.13
CDX96507	Canola	vacuole	31.21	33.13
Bra015943.1-P	Field mustard	vacuole	31.21	33.13
CDY66189	Canola	vacuole	28.32	33.0
KRH54773	Soybean	vacuole	32.08	32.94
TraesCS4D01G215800.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	39.31	32.93
CDX73038	Canola	vacuole	30.64	32.62
CDX73039	Canola	vacuole	30.35	32.21
TraesCS5D01G139700.1	Wheat	vacuole	34.39	31.9
CDY47729	Canola	vacuole	29.77	31.69
Bra008124.1-P	Field mustard	vacuole	29.48	31.38
CDY45863	Canola	vacuole	29.48	31.38
KRH63133	Soybean	peroxisome, vacuole	15.61	31.21
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	38.73	29.58
TraesCS1D01G207200.2	Wheat	extracellular, golgi, vacuole	28.03	26.43
TraesCS2D01G177700.1	Wheat	plasma membrane, vacuole	26.59	25.07
TraesCS2D01G177900.2	Wheat	golgi	26.01	24.66
Bra015944.1-P	Field mustard	vacuole	30.35	17.59

Protein Annotations

EnsemblPlants:TraesCS2D01G076300.1	EnsemblPlantsGene:TraesCS2D01G076300	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF56	PFAM:PF03088	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF63829	MapMan:50.4.3	:	:	:	:

Description

No Description!

Coordinates

chr2D:-:32594560..32595686

Molecular Weight (calculated)

37575.0 Da

IEP (calculated)

5.388

GRAVY (calculated)

-0.045

Length

346 amino acids

Sequence
(BLAST)

001: MVCGGAMSRW LVLLVGLLTI SLVPSCAAAE VKISPTEWSL RLPLPDGVTG AESLAFDALG QGPYTGVSDG RVLKWDGSAV GWTTFAHHAN YRKLPMCTVA
101: MAPSEETEGL CGRLLGLAFH LESGDLYMAD AYNGLMRVGP DGGEAEVLAT AADGVQFNFV NGLDIDQVTG DVYFTDSSVT YPRRFNTEIM MNADATGRLL
201: KYDARTKQVT VLKYSLPYPN GVAVSHDRMH IVVAHTLPCQ AYRYYLQGPK AGHYELLADL PGYPDNVRRD ENGGYWVALN QERGRPGATT RPVRHLVGVR
301: LDGNGVEVEE LTAAKGVTLS EVTERKGKLW LGSIELDYIG LLVALY

Best Arabidopsis Sequence Match ( AT3G57030.1 )
(BLAST)

001: MTMMIITVFL TVIAAVLAIL VKNSQTGSGI FAPPEISGSR DVFPSAKVVN LTGASGPESI AFDPAGEGPY VGVSDGRILK WRGEPLGWSD FAHTSSNRQE
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL

Arabidopsis Description

SSL10Protein STRICTOSIDINE SYNTHASE-LIKE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3D9]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.