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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, golgi, vacuole

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • plasma membrane 1
  • golgi 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, mitochondrion, vacuole
Any Predictor:mitochondrion, secretory
iPSORT:secretory
MultiLoc:vacuole
TargetP:mitochondrion
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU2Hr1G012970.2 Barley mitochondrion 93.47 77.71
HORVU6Hr1G026020.1 Barley cytosol 60.14 70.56
TraesCS2D01G076300.1 Wheat vacuole 82.13 69.08
Zm00001d029108_P001 Maize vacuole 69.76 64.04
Zm00001d029117_P001 Maize vacuole 74.23 63.91
Zm00001d029111_P001 Maize vacuole 74.23 63.91
KXG39404 Sorghum golgi, vacuole 72.85 62.17
Zm00001d029115_P001 Maize extracellular, vacuole 49.48 61.54
Os08t0175000-00 Rice golgi, mitochondrion, vacuole 74.23 60.67
OQU75879 Sorghum vacuole 62.89 59.8
HORVU5Hr1G093840.1 Barley vacuole 68.04 58.41
HORVU3Hr1G065520.3 Barley extracellular 63.23 57.14
HORVU5Hr1G009400.2 Barley cytosol, mitochondrion, plastid, vacuole 25.09 53.68
Os08t0442200-01 Rice extracellular 63.92 53.14
VIT_13s0074g00070.t01 Wine grape vacuole 42.61 45.26
HORVU5Hr1G058910.2 Barley endoplasmic reticulum, extracellular, vacuole 51.89 43.64
HORVU5Hr1G078340.1 Barley golgi, vacuole 36.43 43.44
HORVU3Hr1G109810.1 Barley golgi, vacuole 51.55 42.98
HORVU2Hr1G064060.1 Barley mitochondrion, vacuole 37.46 42.91
VIT_17s0000g04580.t01 Wine grape extracellular, vacuole 26.46 42.54
HORVU5Hr1G114800.1 Barley extracellular 31.27 42.33
GSMUA_Achr3P06240_001 Banana cytosol, mitochondrion, peroxisome, vacuole 45.02 42.26
VIT_10s0042g00030.t01 Wine grape vacuole 39.52 42.12
HORVU7Hr1G028550.2 Barley plastid 25.43 41.57
HORVU7Hr1G028580.1 Barley golgi, vacuole 50.17 41.48
HORVU5Hr1G091230.1 Barley golgi, mitochondrion, plastid, vacuole 50.52 41.29
HORVU5Hr1G058940.2 Barley vacuole 51.2 40.6
VIT_10s0071g00020.t01 Wine grape vacuole 42.61 40.13
PGSC0003DMT400063282 Potato extracellular, vacuole 21.31 40.0
GSMUA_Achr5P05340_001 Banana vacuole 48.8 39.55
VIT_10s0042g00010.t01 Wine grape vacuole 42.27 39.05
HORVU3Hr1G074780.3 Barley cytosol, vacuole 49.48 38.5
VIT_00s0575g00010.t01 Wine grape vacuole 40.89 38.14
VIT_13s0074g00080.t01 Wine grape vacuole 41.92 37.89
VIT_10s0042g00050.t01 Wine grape vacuole 41.92 37.89
VIT_00s0575g00020.t01 Wine grape vacuole 41.92 37.89
VIT_10s0042g00020.t01 Wine grape vacuole 41.92 37.89
VIT_10s0071g00010.t01 Wine grape vacuole 41.58 37.58
Solyc03g114550.1.1 Tomato vacuole 34.71 36.86
PGSC0003DMT400056839 Potato vacuole 39.52 36.86
VIT_17s0000g04600.t01 Wine grape vacuole 41.92 35.57
VIT_10s0071g00250.t01 Wine grape vacuole 40.55 34.71
Solyc12g039070.1.1 Tomato nucleus 39.18 34.23
KRH07462 Soybean vacuole 40.21 33.72
PGSC0003DMT400001736 Potato cytosol, peroxisome, vacuole 31.96 33.57
KRH45407 Soybean nucleus 40.21 33.52
HORVU5Hr1G095260.1 Barley extracellular 45.7 33.33
PGSC0003DMT400063274 Potato vacuole 38.14 33.04
CDX73037 Canola vacuole 37.11 32.93
Solyc03g114560.2.1 Tomato extracellular 36.08 32.11
CDX96505 Canola vacuole 36.08 32.01
Solyc03g114540.1.1 Tomato vacuole 36.77 31.85
PGSC0003DMT400063277 Potato vacuole 36.08 31.63
PGSC0003DMT400063286 Potato vacuole 36.08 31.44
HORVU7Hr1G019170.1 Barley cytosol 18.56 31.4
Solyc03g114530.2.1 Tomato vacuole 35.74 31.33
Bra003820.1-P Field mustard vacuole 34.71 31.27
AT1G74010.1 Thale cress vacuole 34.71 31.08
KRH54773 Soybean vacuole 35.4 30.56
VIT_17s0000g04610.t01 Wine grape vacuole 38.49 30.52
Bra008125.1-P Field mustard cytosol, peroxisome, vacuole 24.4 30.21
Bra008127.1-P Field mustard vacuole 34.02 30.18
AT1G74000.1 Thale cress vacuole 34.02 30.09
CDY45861 Canola vacuole 34.02 30.0
CDY47728 Canola vacuole 33.68 29.97
Bra008126.1-P Field mustard vacuole 33.68 29.97
HORVU4Hr1G016850.1 Barley cytosol 17.87 29.89
AT1G74020.1 Thale cress vacuole 34.36 29.85
CDY66188 Canola vacuole 33.33 29.57
CDX68204 Canola vacuole 33.33 29.57
CDX96506 Canola vacuole 32.99 29.54
KRH56734 Soybean vacuole 34.71 29.53
KRH03206 Soybean vacuole 34.02 29.46
Bra015943.1-P Field mustard vacuole 32.99 29.45
CDX96507 Canola vacuole 32.99 29.45
CDY47729 Canola vacuole 32.65 29.23
HORVU4Hr1G061230.2 Barley peroxisome, vacuole 42.61 28.97
Bra008124.1-P Field mustard vacuole 32.3 28.92
CDX73038 Canola vacuole 32.3 28.92
CDX73039 Canola vacuole 32.3 28.83
CDY66189 Canola vacuole 29.21 28.62
CDY45863 Canola vacuole 31.96 28.62
HORVU5Hr1G043200.4 Barley vacuole 36.43 28.34
VIT_17s0000g04590.t01 Wine grape endoplasmic reticulum, peroxisome, vacuole 41.58 26.71
HORVU6Hr1G025030.1 Barley cytosol 9.97 26.13
KRH63133 Soybean peroxisome, vacuole 15.12 25.43
HORVU5Hr1G114720.1 Barley plastid 15.46 23.68
HORVU1Hr1G052450.8 Barley extracellular, golgi, vacuole 29.55 23.37
Bra015944.1-P Field mustard vacuole 32.99 16.08
Protein Annotations
EnsemblPlants:HORVU2Hr1G013460.2EnsemblPlantsGene:HORVU2Hr1G013460Gene3D:2.120.10.30GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0016844InterPro:6-blade_b-propeller_TolB-likeInterPro:IPR011042InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthasePANTHER:PTHR10426PANTHER:PTHR10426:SF56PFAM:PF03088SEG:segSignalP:SignalP-noTM
SUPFAM:SSF63829UniParc:UPI000B4699F0UniProt:A0A287H4F6MapMan:50.4.3::
Description
No Description!
Coordinates
chrchr2H:-:29222747..29223904
Molecular Weight (calculated)
31226.0 Da
IEP (calculated)
7.974
GRAVY (calculated)
-0.257
Length
291 amino acids
Sequence
(BLAST)
001: PAPRLMGRRG SASGWLVLLA ALLAASLVPP CAAAEVKTSP TEWSLHLPLP SGVSGAESLA FDARGQGPYT GVSDGRVLKW GGGAVGWTTF AHHANYRKFP
101: MCTEPVAPSQ DTESLCGRPL GLAFHRKSGD LYIADAYKGL MRVGPDGGEA EVLATGAGGV PFNFVNGIDI DQATGDVYFT DSSVTYPRRF NTEIMMNADA
201: TGRLLKYDAQ TKQVTVLKDG LPYPNGVAVS HDRTYVVVAH TVPCQAHRYY LQGPKAGRYE LLADLPGYPD NVRRDDKGGY WVALNQEKGR P
Best Arabidopsis Sequence Match ( AT3G57030.1 )
(BLAST)
001: MTMMIITVFL TVIAAVLAIL VKNSQTGSGI FAPPEISGSR DVFPSAKVVN LTGASGPESI AFDPAGEGPY VGVSDGRILK WRGEPLGWSD FAHTSSNRQE
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL
Arabidopsis Description
SSL10Protein STRICTOSIDINE SYNTHASE-LIKE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3D9]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.