Factsheet for HORVU7Hr1G028580.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

plastid 1
extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
TargetP:	secretory
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G040400.1	Wheat	golgi, vacuole	93.18	94.25
TraesCS7D01G139900.1	Wheat	vacuole	93.18	94.25
TraesCS7D01G140000.1	Wheat	golgi, vacuole	93.18	94.25
TraesCS7D01G140500.1	Wheat	golgi, vacuole	91.19	93.04
TraesCS7A01G138300.1	Wheat	cytosol	55.11	92.82
TraesCS7B01G040900.1	Wheat	golgi, vacuole	91.76	92.82
HORVU5Hr1G091230.1	Barley	golgi, mitochondrion, plastid, vacuole	93.75	92.7
TraesCS7A01G138700.1	Wheat	cytosol	54.83	92.34
TraesCS7D01G140600.1	Wheat	endoplasmic reticulum, plasma membrane	79.55	91.21
TraesCSU01G104000.1	Wheat	golgi, vacuole	90.06	91.09
TraesCS7A01G138800.1	Wheat	golgi, vacuole	77.27	89.18
HORVU2Hr1G064060.1	Barley	mitochondrion, vacuole	59.09	81.89
HORVU3Hr1G109810.1	Barley	golgi, vacuole	65.91	66.48
HORVU3Hr1G074780.3	Barley	cytosol, vacuole	66.19	62.3
HORVU7Hr1G028550.2	Barley	plastid	30.97	61.24
HORVU5Hr1G078340.1	Barley	golgi, vacuole	41.48	59.84
HORVU2Hr1G013460.2	Barley	golgi, mitochondrion, vacuole	41.48	50.17
HORVU6Hr1G026020.1	Barley	cytosol	34.66	49.19
HORVU2Hr1G012970.2	Barley	mitochondrion	48.3	48.57
HORVU5Hr1G093840.1	Barley	vacuole	46.31	48.08
HORVU5Hr1G058910.2	Barley	endoplasmic reticulum, extracellular, vacuole	46.02	46.82
HORVU3Hr1G065520.3	Barley	extracellular	42.05	45.96
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	39.77	45.16
HORVU5Hr1G009400.2	Barley	cytosol, mitochondrion, plastid, vacuole	17.33	44.85
HORVU5Hr1G058940.2	Barley	vacuole	46.59	44.69
GSMUA_Achr5P05340_001	Banana	vacuole	42.9	42.06
VIT_13s0074g00070.t01	Wine grape	vacuole	30.68	39.42
PGSC0003DMT400063282	Potato	extracellular, vacuole	17.33	39.35
VIT_10s0042g00010.t01	Wine grape	vacuole	34.66	38.73
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	19.89	38.67
VIT_13s0074g00080.t01	Wine grape	vacuole	35.23	38.51
VIT_10s0042g00030.t01	Wine grape	vacuole	29.83	38.46
VIT_00s0575g00010.t01	Wine grape	vacuole	33.81	38.14
VIT_00s0575g00020.t01	Wine grape	vacuole	34.66	37.89
VIT_10s0071g00020.t01	Wine grape	vacuole	33.24	37.86
VIT_10s0042g00050.t01	Wine grape	vacuole	34.38	37.58
VIT_10s0042g00020.t01	Wine grape	vacuole	34.38	37.58
VIT_10s0071g00010.t01	Wine grape	vacuole	34.09	37.27
HORVU5Hr1G114800.1	Barley	extracellular	22.73	37.21
PGSC0003DMT400056839	Potato	vacuole	32.39	36.54
VIT_10s0071g00250.t01	Wine grape	vacuole	35.23	36.47
KRH07462	Soybean	vacuole	35.8	36.31
VIT_17s0000g04600.t01	Wine grape	vacuole	33.81	34.69
KRH45407	Soybean	nucleus	34.38	34.67
PGSC0003DMT400063277	Potato	vacuole	32.67	34.64
Solyc03g114560.2.1	Tomato	extracellular	32.1	34.56
CDX73037	Canola	vacuole	31.82	34.15
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	26.7	33.94
Solyc12g039070.1.1	Tomato	nucleus	32.1	33.93
CDX96505	Canola	vacuole	31.53	33.84
HORVU5Hr1G095260.1	Barley	extracellular	38.35	33.83
AT1G74010.1	Thale cress	vacuole	30.97	33.54
Solyc03g114530.2.1	Tomato	vacuole	31.53	33.43
KRH03206	Soybean	vacuole	31.82	33.33
KRH54773	Soybean	vacuole	31.53	32.94
HORVU5Hr1G043200.4	Barley	vacuole	34.94	32.89
Solyc03g114550.1.1	Tomato	vacuole	25.57	32.85
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	21.88	32.77
KRH56734	Soybean	vacuole	31.82	32.75
PGSC0003DMT400063274	Potato	vacuole	30.97	32.44
Solyc03g114540.1.1	Tomato	vacuole	30.97	32.44
PGSC0003DMT400063286	Potato	vacuole	30.68	32.34
Bra003820.1-P	Field mustard	vacuole	29.55	32.2
VIT_17s0000g04610.t01	Wine grape	vacuole	33.52	32.15
CDY47728	Canola	vacuole	29.55	31.8
CDY66189	Canola	vacuole	26.7	31.65
Bra008126.1-P	Field mustard	vacuole	29.26	31.5
CDY47729	Canola	vacuole	28.98	31.38
CDX96507	Canola	vacuole	28.98	31.29
Bra015943.1-P	Field mustard	vacuole	28.98	31.29
CDX68204	Canola	vacuole	28.98	31.1
Bra008124.1-P	Field mustard	vacuole	28.69	31.08
CDX73039	Canola	vacuole	28.69	30.98
CDY45863	Canola	vacuole	28.41	30.77
CDY45861	Canola	vacuole	28.69	30.61
HORVU5Hr1G114720.1	Barley	plastid	16.48	30.53
AT1G74000.1	Thale cress	vacuole	28.41	30.4
CDY66188	Canola	vacuole	28.12	30.18
Bra008127.1-P	Field mustard	vacuole	28.12	30.18
AT1G74020.1	Thale cress	vacuole	28.69	30.15
HORVU4Hr1G061230.2	Barley	peroxisome, vacuole	36.08	29.67
CDX73038	Canola	vacuole	27.27	29.54
CDX96506	Canola	vacuole	27.27	29.54
HORVU7Hr1G019170.1	Barley	cytosol	14.2	29.07
HORVU4Hr1G016850.1	Barley	cytosol	13.92	28.16
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	33.81	26.27
KRH63133	Soybean	peroxisome, vacuole	12.78	26.01
HORVU1Hr1G052450.8	Barley	extracellular, golgi, vacuole	26.42	25.27
HORVU6Hr1G025030.1	Barley	cytosol	7.39	23.42
Bra015944.1-P	Field mustard	vacuole	26.7	15.75

Protein Annotations

EnsemblPlants:HORVU7Hr1G028580.1	EnsemblPlantsGene:HORVU7Hr1G028580	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF28	PFAM:PF03088	SEG:seg	SignalP:SignalP-TM
SUPFAM:SSF63829	TMHMM:TMhelix	UniParc:UPI000B47BEFA	UniProt:A0A287VVL8	MapMan:50.4.3	:

Description

No Description!

Coordinates

chrchr7H:+:52445311..52446369

Molecular Weight (calculated)

38189.8 Da

IEP (calculated)

9.479

GRAVY (calculated)

-0.195

Length

352 amino acids

Sequence
(BLAST)

001: SKSTMASGTR GVAAATISLA VLLLIFCFSP STAAAAAVPS IDATRTRHLP LPRGLLRGPE SVAFDAKGHG PYSGVSDGRV LKWNGDALGW STYTYNPDYS
101: SEACTASLLR PETATESHCG RPLGLRFHLK SGYLYIADAY KGLMRVAPGG GEATVLVTEV DSVPLRFTNG VDIDQVTGEV YFTDSSMNFN RSQHEMVTRT
201: GDSSGRLMRY DPRTGKAVVL QAGITYPNGL AISADRTHLI ISSTGPCKLL RYWIKGSKTG TMELFADLPG YPDNVRPDKK GGYWVALHRE KNELPFGVDS
301: HLLALRIDAE GKIIEEMRGP KSVRPTEVVE RKGGKLFMGS VELRYVSVVI RK

Best Arabidopsis Sequence Match ( AT1G08470.1 )
(BLAST)

001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP

Arabidopsis Description

SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.