Factsheet for HORVU5Hr1G078340.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
TargetP:	secretory
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G504000.1	Wheat	vacuole	79.1	55.94
TraesCS3A01G496700.1	Wheat	golgi, vacuole	77.87	55.07
TraesCS3B01G559100.1	Wheat	vacuole	77.87	55.07
TraesCS3A01G496900.1	Wheat	vacuole	78.28	54.57
HORVU3Hr1G109810.1	Barley	golgi, vacuole	77.46	54.15
TraesCS3D01G503900.1	Wheat	nucleus	68.03	53.38
HORVU7Hr1G028550.2	Barley	plastid	35.66	48.88
TraesCS3B01G558800.1	Wheat	cytosol	38.11	44.5
HORVU7Hr1G028580.1	Barley	golgi, vacuole	59.84	41.48
HORVU2Hr1G064060.1	Barley	mitochondrion, vacuole	43.03	41.34
TraesCS3B01G559000.1	Wheat	cytosol	31.56	41.18
HORVU5Hr1G091230.1	Barley	golgi, mitochondrion, plastid, vacuole	59.84	41.01
HORVU3Hr1G074780.3	Barley	cytosol, vacuole	62.7	40.91
HORVU2Hr1G013460.2	Barley	golgi, mitochondrion, vacuole	43.44	36.43
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	25.41	34.25
PGSC0003DMT400063282	Potato	extracellular, vacuole	21.72	34.19
VIT_13s0074g00070.t01	Wine grape	vacuole	36.48	32.48
HORVU3Hr1G065520.3	Barley	extracellular	41.8	31.68
VIT_10s0042g00030.t01	Wine grape	vacuole	34.84	31.14
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	39.34	30.97
HORVU5Hr1G114800.1	Barley	extracellular	27.05	30.7
HORVU5Hr1G058910.2	Barley	endoplasmic reticulum, extracellular, vacuole	43.44	30.64
HORVU5Hr1G093840.1	Barley	vacuole	42.21	30.38
GSMUA_Achr5P05340_001	Banana	vacuole	43.44	29.53
HORVU6Hr1G026020.1	Barley	cytosol	29.92	29.44
HORVU2Hr1G012970.2	Barley	mitochondrion	42.21	29.43
HORVU5Hr1G058940.2	Barley	vacuole	43.03	28.61
VIT_10s0071g00020.t01	Wine grape	vacuole	36.07	28.48
VIT_00s0575g00010.t01	Wine grape	vacuole	36.07	28.21
VIT_00s0575g00020.t01	Wine grape	vacuole	36.48	27.64
VIT_10s0042g00010.t01	Wine grape	vacuole	35.66	27.62
VIT_13s0074g00080.t01	Wine grape	vacuole	36.07	27.33
VIT_10s0042g00020.t01	Wine grape	vacuole	35.66	27.02
VIT_10s0042g00050.t01	Wine grape	vacuole	35.66	27.02
VIT_10s0071g00010.t01	Wine grape	vacuole	35.25	26.71
VIT_10s0071g00250.t01	Wine grape	vacuole	36.89	26.47
KRH07462	Soybean	vacuole	37.3	26.22
KRH45407	Soybean	nucleus	37.3	26.07
Solyc03g114550.1.1	Tomato	vacuole	29.1	25.91
CDX73037	Canola	vacuole	33.2	24.7
PGSC0003DMT400056839	Potato	vacuole	31.56	24.68
HORVU7Hr1G019170.1	Barley	cytosol	17.21	24.42
CDX96505	Canola	vacuole	32.79	24.39
HORVU4Hr1G016850.1	Barley	cytosol	17.21	24.14
Solyc03g114560.2.1	Tomato	extracellular	31.56	23.55
Solyc12g039070.1.1	Tomato	nucleus	31.97	23.42
VIT_17s0000g04600.t01	Wine grape	vacuole	32.38	23.03
Solyc03g114540.1.1	Tomato	vacuole	31.56	22.92
KRH03206	Soybean	vacuole	31.56	22.92
PGSC0003DMT400063274	Potato	vacuole	31.15	22.62
KRH56734	Soybean	vacuole	31.56	22.51
PGSC0003DMT400063286	Potato	vacuole	30.74	22.46
Bra008126.1-P	Field mustard	vacuole	29.92	22.32
Bra008127.1-P	Field mustard	vacuole	29.92	22.26
AT1G74010.1	Thale cress	vacuole	29.51	22.15
CDY45861	Canola	vacuole	29.92	22.12
CDY47728	Canola	vacuole	29.51	22.02
Bra003820.1-P	Field mustard	vacuole	29.1	21.98
KRH54773	Soybean	vacuole	30.33	21.96
AT1G74020.1	Thale cress	vacuole	29.92	21.79
HORVU5Hr1G043200.4	Barley	vacuole	33.2	21.66
HORVU5Hr1G095260.1	Barley	extracellular	35.25	21.55
CDX96506	Canola	vacuole	28.69	21.54
CDY47729	Canola	vacuole	28.69	21.54
PGSC0003DMT400063277	Potato	vacuole	29.1	21.39
AT1G74000.1	Thale cress	vacuole	28.69	21.28
VIT_17s0000g04610.t01	Wine grape	vacuole	31.97	21.25
Bra008124.1-P	Field mustard	vacuole	28.28	21.23
CDX73038	Canola	vacuole	28.28	21.23
Bra015943.1-P	Field mustard	vacuole	28.28	21.17
CDX96507	Canola	vacuole	28.28	21.17
Solyc03g114530.2.1	Tomato	vacuole	28.69	21.08
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	23.77	20.94
CDY45863	Canola	vacuole	27.87	20.92
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	20.08	20.85
CDY66188	Canola	vacuole	27.87	20.73
CDX73039	Canola	vacuole	27.46	20.55
CDX68204	Canola	vacuole	27.46	20.43
CDY66189	Canola	vacuole	24.59	20.2
HORVU4Hr1G061230.2	Barley	peroxisome, vacuole	32.79	18.69
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	34.43	18.54
HORVU6Hr1G025030.1	Barley	cytosol	8.2	18.02
HORVU1Hr1G052450.8	Barley	extracellular, golgi, vacuole	24.18	16.03
KRH63133	Soybean	peroxisome, vacuole	9.02	12.72
HORVU5Hr1G009400.2	Barley	cytosol, mitochondrion, plastid, vacuole	6.56	11.76
Bra015944.1-P	Field mustard	vacuole	28.69	11.73
HORVU5Hr1G114720.1	Barley	plastid	8.2	10.53

Protein Annotations

EnsemblPlants:HORVU5Hr1G078340.1	EnsemblPlantsGene:HORVU5Hr1G078340	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF28	PFAM:PF03088	SEG:seg	SignalP:SignalP-TM
SUPFAM:SSF63829	TMHMM:TMhelix	UniParc:UPI000B466C90	UniProt:A0A287RXC4	MapMan:50.4.3	:

Description

No Description!

Coordinates

chrchr5H:-:554743376..554744411

Molecular Weight (calculated)

26538.7 Da

IEP (calculated)

6.925

GRAVY (calculated)

-0.124

Length

244 amino acids

Sequence
(BLAST)

001: RVKRKTCLLL VTLLILVLLF MPGAVTATAN FDASRTEQML LPHGTVHGPE SVALDGLGHG PYNDASAGRI LKWNGDKLGL TTYAYGPGYD SRTCTLSKFS
101: RETDNARESC CGCPLGLRFY QKSDDLYVAD AYKGLMWVAP GGGEAAVLVN QVDGFPLHFT DGVDVDQVMG QVYFTDSSMK YQRSQHEMVT RTGDSTGRLM
201: SYDPQTSDVI VLQTCMTYPN GVALSANHTH LVVASTGSCK LLRH

Best Arabidopsis Sequence Match ( AT3G57030.1 )
(BLAST)

001: MTMMIITVFL TVIAAVLAIL VKNSQTGSGI FAPPEISGSR DVFPSAKVVN LTGASGPESI AFDPAGEGPY VGVSDGRILK WRGEPLGWSD FAHTSSNRQE
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL

Arabidopsis Description

SSL10Protein STRICTOSIDINE SYNTHASE-LIKE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3D9]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.