Factsheet for TraesCS3B01G559100.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G558800.1	Wheat	cytosol	60.29	99.52
TraesCS3B01G559000.1	Wheat	cytosol	53.62	98.93
TraesCS3A01G496700.1	Wheat	golgi, vacuole	95.65	95.65
TraesCS3A01G496900.1	Wheat	vacuole	95.36	94.0
TraesCS3D01G503900.1	Wheat	nucleus	82.03	91.0
HORVU3Hr1G109810.1	Barley	golgi, vacuole	89.28	88.25
HORVU5Hr1G078340.1	Barley	golgi, vacuole	55.07	77.87
TraesCS5B01G330900.1	Wheat	extracellular, vacuole	41.74	77.84
TraesCS3B01G338500.1	Wheat	extracellular, golgi, vacuole	72.17	72.59
TraesCS7B01G040900.1	Wheat	golgi, vacuole	70.14	69.54
TraesCS7B01G040400.1	Wheat	golgi, vacuole	69.57	68.97
TraesCS2B01G281700.1	Wheat	golgi, vacuole	68.7	68.9
TraesCS3B01G289800.1	Wheat	vacuole	50.72	52.08
TraesCS2B01G092900.1	Wheat	golgi, vacuole	51.3	51.75
TraesCS2B01G093000.1	Wheat	golgi, vacuole	50.43	50.73
TraesCS5B01G383000.1	Wheat	vacuole	49.57	50.44
TraesCS5B01G382800.1	Wheat	vacuole	49.28	49.85
TraesCS5B01G195300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	47.83	47.69
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	42.61	47.42
TraesCS5B01G195400.1	Wheat	vacuole	48.7	46.15
GSMUA_Achr5P05340_001	Banana	vacuole	47.54	45.68
VIT_13s0074g00070.t01	Wine grape	vacuole	34.2	43.07
VIT_10s0042g00010.t01	Wine grape	vacuole	38.26	41.9
VIT_10s0042g00030.t01	Wine grape	vacuole	33.04	41.76
VIT_00s0575g00010.t01	Wine grape	vacuole	37.39	41.35
VIT_00s0575g00020.t01	Wine grape	vacuole	38.26	40.99
VIT_13s0074g00080.t01	Wine grape	vacuole	38.26	40.99
VIT_10s0042g00020.t01	Wine grape	vacuole	38.26	40.99
VIT_10s0071g00020.t01	Wine grape	vacuole	36.23	40.45
VIT_10s0042g00050.t01	Wine grape	vacuole	37.68	40.37
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	21.16	40.33
VIT_10s0071g00010.t01	Wine grape	vacuole	37.39	40.06
KRH07462	Soybean	vacuole	38.55	38.33
PGSC0003DMT400056839	Potato	vacuole	34.49	38.14
PGSC0003DMT400063282	Potato	extracellular, vacuole	16.52	36.77
KRH45407	Soybean	nucleus	37.1	36.68
Solyc12g039070.1.1	Tomato	nucleus	34.78	36.04
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	28.7	35.74
Bra003820.1-P	Field mustard	vacuole	33.33	35.6
AT1G74010.1	Thale cress	vacuole	33.04	35.08
CDX73037	Canola	vacuole	33.33	35.06
CDX96505	Canola	vacuole	33.33	35.06
VIT_10s0071g00250.t01	Wine grape	vacuole	34.49	35.0
VIT_17s0000g04600.t01	Wine grape	vacuole	34.78	34.99
Solyc03g114560.2.1	Tomato	extracellular	33.04	34.86
CDY66189	Canola	vacuole	29.86	34.68
Solyc03g114550.1.1	Tomato	vacuole	27.54	34.67
Bra008127.1-P	Field mustard	vacuole	32.75	34.45
PGSC0003DMT400063277	Potato	vacuole	33.04	34.34
CDY45861	Canola	vacuole	32.75	34.24
KRH56734	Soybean	vacuole	33.91	34.21
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	23.19	34.04
AT1G74020.1	Thale cress	vacuole	33.04	34.03
Solyc03g114540.1.1	Tomato	vacuole	33.04	33.93
TraesCS5B01G395100.1	Wheat	vacuole	39.13	33.83
PGSC0003DMT400063286	Potato	vacuole	32.75	33.83
KRH54773	Soybean	vacuole	33.04	33.83
KRH03206	Soybean	vacuole	32.75	33.63
CDX68204	Canola	vacuole	31.88	33.54
AT1G74000.1	Thale cress	vacuole	31.88	33.43
Solyc03g114530.2.1	Tomato	vacuole	32.17	33.43
PGSC0003DMT400063274	Potato	vacuole	32.46	33.33
Bra008126.1-P	Field mustard	vacuole	31.59	33.33
CDY47728	Canola	vacuole	31.59	33.33
CDY66188	Canola	vacuole	31.59	33.23
CDY47729	Canola	vacuole	31.01	32.92
CDX96506	Canola	vacuole	31.01	32.92
TraesCS5B01G133600.1	Wheat	extracellular, vacuole	35.36	32.62
Bra008124.1-P	Field mustard	vacuole	30.72	32.62
CDX73038	Canola	vacuole	30.72	32.62
CDY45863	Canola	vacuole	30.43	32.31
VIT_17s0000g04610.t01	Wine grape	vacuole	34.2	32.15
Bra015943.1-P	Field mustard	vacuole	30.14	31.9
CDX96507	Canola	vacuole	30.14	31.9
CDX73039	Canola	vacuole	29.86	31.6
TraesCS4B01G215300.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	35.65	29.78
KRH63133	Soybean	peroxisome, vacuole	14.2	28.32
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	36.23	27.59
TraesCS1B01G217600.1	Wheat	extracellular, golgi, vacuole	28.41	26.7
TraesCS2B01G196600.1	Wheat	golgi	24.93	23.56
TraesCS2B01G196500.1	Wheat	golgi, vacuole	24.64	23.16
Bra015944.1-P	Field mustard	vacuole	30.43	17.59

Protein Annotations

EnsemblPlants:TraesCS3B01G559100.1	EnsemblPlantsGene:TraesCS3B01G559100	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF28	PFAM:PF03088	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF63829	TMHMM:TMhelix	MapMan:50.4.3	:	:	:

Description

No Description!

Coordinates

chr3B:+:793061755..793062792

Molecular Weight (calculated)

37624.9 Da

IEP (calculated)

9.315

GRAVY (calculated)

-0.409

Length

345 amino acids

Sequence
(BLAST)

001: MGCSMSRLLK TTVTLIILVL LLMPGALAAT SFDASRSQQL PLPRGTVKGP ESVAFDGLGQ GPYSGVSDGR ILKWNGEKLG WTTYAYGPGY DSKTCTPSKF
101: SSETENARES RCGRPLGLRF DEKSGDLYVA DAYKGLMRVA PGGGEATVLV NQVDGYPLRF TNGVDVDQVT GKVYFTDSSM NYQRSQHEMV TRTGDSTGRL
201: MSYDPRTSDV TLLQAGMTYP NGVALSADRT HLVVASTGPC KLLRHWIKGV NAGTSEPFAD LPGYPDNVRP DTKGGYWVAL HREKNELPFG RDSHRLAVRV
301: GNDGNIVEEM RGPKKVRPTE IMERSNGKIY LGSVELPYVG VVKRK

Best Arabidopsis Sequence Match ( AT1G08470.1 )
(BLAST)

001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP

Arabidopsis Description

SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.