Factsheet for TraesCS2B01G093000.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G078000.1	Wheat	vacuole	95.04	95.04
TraesCS2B01G092900.1	Wheat	golgi, vacuole	94.75	95.03
HORVU2Hr1G012970.2	Barley	mitochondrion	91.55	89.71
Zm00001d029115_P001	Maize	extracellular, vacuole	53.35	78.21
Zm00001d029108_P001	Maize	vacuole	70.26	76.03
Zm00001d029117_P001	Maize	vacuole	74.34	75.44
Zm00001d029111_P001	Maize	vacuole	74.34	75.44
KXG39404	Sorghum	golgi, vacuole	73.47	73.9
OQU75879	Sorghum	vacuole	65.89	73.86
TraesCS3B01G289800.1	Wheat	vacuole	71.43	72.92
Os08t0175000-00	Rice	golgi, mitochondrion, vacuole	75.22	72.47
TraesCS5B01G382800.1	Wheat	vacuole	72.01	72.43
TraesCS5B01G383000.1	Wheat	vacuole	71.43	72.27
Os08t0442200-01	Rice	extracellular	67.35	66.0
TraesCS3B01G559000.1	Wheat	cytosol	27.7	50.8
TraesCS3B01G559100.1	Wheat	vacuole	50.73	50.43
TraesCS5B01G195300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	50.73	50.29
TraesCS3B01G558800.1	Wheat	cytosol	30.32	49.76
TraesCS2B01G281700.1	Wheat	golgi, vacuole	49.56	49.42
TraesCS7B01G040900.1	Wheat	golgi, vacuole	49.85	49.14
TraesCS7B01G040400.1	Wheat	golgi, vacuole	49.27	48.56
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	43.44	48.06
TraesCS3B01G338500.1	Wheat	extracellular, golgi, vacuole	47.81	47.81
TraesCS5B01G330900.1	Wheat	extracellular, vacuole	25.36	47.03
VIT_10s0042g00010.t01	Wine grape	vacuole	42.57	46.35
GSMUA_Achr5P05340_001	Banana	vacuole	48.4	46.24
VIT_13s0074g00070.t01	Wine grape	vacuole	36.44	45.62
TraesCS5B01G195400.1	Wheat	vacuole	48.4	45.6
VIT_00s0575g00010.t01	Wine grape	vacuole	41.4	45.51
VIT_10s0071g00020.t01	Wine grape	vacuole	40.82	45.31
VIT_10s0042g00020.t01	Wine grape	vacuole	42.27	45.03
VIT_10s0042g00050.t01	Wine grape	vacuole	41.98	44.72
VIT_00s0575g00020.t01	Wine grape	vacuole	41.69	44.41
VIT_10s0071g00010.t01	Wine grape	vacuole	41.4	44.1
VIT_13s0074g00080.t01	Wine grape	vacuole	41.11	43.79
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	22.74	43.09
VIT_10s0042g00030.t01	Wine grape	vacuole	33.82	42.49
PGSC0003DMT400056839	Potato	vacuole	37.03	40.71
VIT_17s0000g04600.t01	Wine grape	vacuole	40.52	40.52
PGSC0003DMT400063282	Potato	extracellular, vacuole	17.78	39.35
KRH07462	Soybean	vacuole	39.65	39.19
VIT_10s0071g00250.t01	Wine grape	vacuole	38.19	38.53
KRH45407	Soybean	nucleus	39.07	38.4
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	30.61	37.91
Solyc12g039070.1.1	Tomato	nucleus	36.44	37.54
TraesCS5B01G395100.1	Wheat	vacuole	42.86	36.84
CDX73037	Canola	vacuole	34.99	36.59
PGSC0003DMT400063274	Potato	vacuole	35.57	36.31
PGSC0003DMT400063277	Potato	vacuole	34.99	36.14
Solyc03g114560.2.1	Tomato	extracellular	34.11	35.78
AT1G74010.1	Thale cress	vacuole	33.82	35.69
Solyc03g114540.1.1	Tomato	vacuole	34.69	35.42
Solyc03g114550.1.1	Tomato	vacuole	28.28	35.4
CDX96505	Canola	vacuole	33.82	35.37
PGSC0003DMT400063286	Potato	vacuole	34.4	35.33
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	24.2	35.32
KRH54773	Soybean	vacuole	34.69	35.31
Bra003820.1-P	Field mustard	vacuole	33.24	35.29
Solyc03g114530.2.1	Tomato	vacuole	34.11	35.24
Bra008127.1-P	Field mustard	vacuole	32.65	34.15
AT1G74000.1	Thale cress	vacuole	32.65	34.04
KRH03206	Soybean	vacuole	33.24	33.93
VIT_17s0000g04610.t01	Wine grape	vacuole	36.15	33.79
AT1G74020.1	Thale cress	vacuole	32.94	33.73
CDX96506	Canola	vacuole	31.78	33.54
TraesCS5B01G133600.1	Wheat	extracellular, vacuole	36.44	33.42
Bra008126.1-P	Field mustard	vacuole	31.78	33.33
CDY45861	Canola	vacuole	32.07	33.33
CDY47728	Canola	vacuole	31.78	33.33
KRH56734	Soybean	vacuole	33.24	33.33
CDX68204	Canola	vacuole	31.78	33.23
CDY66188	Canola	vacuole	31.78	33.23
CDY47729	Canola	vacuole	31.49	33.23
CDY66189	Canola	vacuole	28.57	33.0
CDX73038	Canola	vacuole	31.2	32.92
Bra008124.1-P	Field mustard	vacuole	31.2	32.92
CDX96507	Canola	vacuole	31.2	32.82
CDX73039	Canola	vacuole	31.2	32.82
Bra015943.1-P	Field mustard	vacuole	31.2	32.82
TraesCS4B01G215300.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	39.36	32.69
CDY45863	Canola	vacuole	30.9	32.62
KRH63133	Soybean	peroxisome, vacuole	16.33	32.37
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	38.48	29.14
TraesCS1B01G217600.1	Wheat	extracellular, golgi, vacuole	27.99	26.16
TraesCS2B01G196600.1	Wheat	golgi	26.82	25.21
TraesCS2B01G196500.1	Wheat	golgi, vacuole	26.53	24.8
Bra015944.1-P	Field mustard	vacuole	31.49	18.09

Protein Annotations

EnsemblPlants:TraesCS2B01G093000.1	EnsemblPlantsGene:TraesCS2B01G093000	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF56	PFAM:PF03088	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF63829	TMHMM:TMhelix	MapMan:50.4.3	:	:	:

Description

No Description!

Coordinates

chr2B:+:53577481..53578600

Molecular Weight (calculated)

36645.7 Da

IEP (calculated)

6.875

GRAVY (calculated)

-0.117

Length

343 amino acids

Sequence
(BLAST)

001: MGRRGSAGGW LVLLLALLAV SLAPSCSAAE VKTSPTEWSL HLPLPSGVTG AESLAFDARG QGPYTGVSDG RVLKWGGSAA GWTTFAYHAN YRKFPMCTVP
101: VAPSEETESL CGRPLGLAFH RKSGDLYIAD AYKGLMKVGP DGGEAEVLAT KADGVPFNFV NGIDIDQVTG DVYFTDSSVT YPRRFNTEIM MNADATGRLL
201: KYDAVTKQVT VLKDGLPYPN GVAVSYDRMY VVVAHTVPCQ AHKYYLQGPK AGHYELLADL PGYPDNVRRD GKGGYWVGLN QEKGRPGATT APVKHLVGVR
301: LNGGGVEVEE LTAAKGVTLS EVTERKGQLW LGSVELDYIG LVA

Best Arabidopsis Sequence Match ( AT2G41290.1 )
(BLAST)

001: MMKLLLVVAT SVALIFSVTD LSGEGPKHGG ESMLTVQIPD FRLIPTTGAL GPESFVFDFF GDGPYTGLSD GRIVKWLANE SRWIDFAVTT SAREGCEGPH
101: EHQRTEHVCG RPLGLAFDKS TGDLYIADAY MGLLKVGPTG GVATQVLPRE LNEALRFTNS LDINPRTGVV YFTDSSSVYQ RRNYIGAMMS GDKTGRLMKY
201: DNTKQVTTLL SNLAFVNGVA LSQNGDYLLV VETAMCRILR YWLNETSVKS QSHDNYEIFA EGLPGFPDNI KRSPRGGFWV GLNTKHSKLT KFAMSNAWLG
301: RAALGLPVDW MKVHSVWARY NGNGMAVRLS EDSGVILEVF EGKNENKWIS ISEVEEKDGT LWVGSVNTPF AGMYKI

Arabidopsis Description

SSL2Protein STRICTOSIDINE SYNTHASE-LIKE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLG8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.