Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 6
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G114720.1 | Barley | plastid | 46.87 | 98.42 |
| TraesCS5A01G390200.1 | Wheat | golgi | 97.24 | 97.49 |
| TraesCS5D01G400000.1 | Wheat | golgi | 96.99 | 97.24 |
| HORVU5Hr1G095260.1 | Barley | extracellular | 96.49 | 96.49 |
| HORVU5Hr1G114800.1 | Barley | extracellular | 49.62 | 92.09 |
| Os03t0750700-01 | Rice | plasma membrane | 86.72 | 86.72 |
| EER90869 | Sorghum | vacuole | 85.96 | 86.18 |
| GSMUA_Achr3P30810_001 | Banana | endoplasmic reticulum, vacuole | 68.67 | 70.44 |
| VIT_06s0009g00850.t01 | Wine grape | cytosol | 59.9 | 68.09 |
| HORVU6Hr1G025030.1 | Barley | cytosol | 18.05 | 64.86 |
| Zm00001d034032_P001 | Maize | plasma membrane | 86.22 | 63.82 |
| Solyc06g073910.2.1 | Tomato | cytosol, plasma membrane, vacuole | 48.62 | 63.82 |
| Bra018623.1-P | Field mustard | cytosol | 55.89 | 63.53 |
| CDX92388 | Canola | vacuole | 56.64 | 61.75 |
| PGSC0003DMT400015199 | Potato | vacuole | 60.4 | 61.64 |
| Bra002383.1-P | Field mustard | vacuole | 60.65 | 61.27 |
| PGSC0003DMT400007732 | Potato | vacuole | 59.9 | 61.13 |
| AT5G22020.2 | Thale cress | vacuole | 60.4 | 61.01 |
| CDY16615 | Canola | endoplasmic reticulum, extracellular, vacuole | 60.4 | 61.01 |
| Solyc11g071800.1.1 | Tomato | plastid, vacuole | 59.65 | 60.87 |
| CDX93560 | Canola | vacuole | 58.9 | 59.8 |
| AT1G08470.1 | Thale cress | endoplasmic reticulum, vacuole | 58.4 | 59.74 |
| CDX95058 | Canola | vacuole | 55.14 | 58.82 |
| KRH26734 | Soybean | vacuole | 52.63 | 57.53 |
| KRH56180 | Soybean | endoplasmic reticulum | 60.9 | 55.1 |
| KRH22599 | Soybean | vacuole | 52.38 | 54.29 |
| TraesCS5B01G382800.1 | Wheat | vacuole | 37.09 | 43.4 |
| TraesCS3B01G289800.1 | Wheat | vacuole | 36.34 | 43.15 |
| TraesCS5B01G383000.1 | Wheat | vacuole | 36.59 | 43.07 |
| TraesCS2B01G093000.1 | Wheat | golgi, vacuole | 36.84 | 42.86 |
| TraesCS2B01G092900.1 | Wheat | golgi, vacuole | 36.59 | 42.69 |
| TraesCS5B01G195300.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 36.59 | 42.2 |
| TraesCS3B01G559000.1 | Wheat | cytosol | 19.05 | 40.64 |
| TraesCS7B01G040900.1 | Wheat | golgi, vacuole | 35.09 | 40.23 |
| TraesCS7B01G040400.1 | Wheat | golgi, vacuole | 34.34 | 39.37 |
| TraesCS3B01G559100.1 | Wheat | vacuole | 33.83 | 39.13 |
| TraesCS5B01G195400.1 | Wheat | vacuole | 35.59 | 39.01 |
| TraesCS4B01G215300.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, vacuole | 40.35 | 38.98 |
| TraesCS3B01G558800.1 | Wheat | cytosol | 20.3 | 38.76 |
| TraesCS2B01G281700.1 | Wheat | golgi, vacuole | 33.33 | 38.66 |
| TraesCS3B01G338500.1 | Wheat | extracellular, golgi, vacuole | 32.08 | 37.32 |
| TraesCS5B01G133600.1 | Wheat | extracellular, vacuole | 33.83 | 36.1 |
| TraesCS5B01G330900.1 | Wheat | extracellular, vacuole | 16.54 | 35.68 |
| TraesCS1B01G217600.1 | Wheat | extracellular, golgi, vacuole | 28.82 | 31.34 |
| TraesCS2B01G196500.1 | Wheat | golgi, vacuole | 28.57 | 31.06 |
| TraesCS2B01G196600.1 | Wheat | golgi | 26.82 | 29.32 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G395100.1 | EnsemblPlantsGene:TraesCS5B01G395100 | Gene3D:2.120.10.30 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016844 | InterPro:6-blade_b-propeller_TolB-like | InterPro:IPR011042 | InterPro:Strictosidine_synth_cons-reg |
| InterPro:Strictosidine_synthase | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF24 | PFAM:PF03088 | SEG:seg | SignalP:SignalP-noTM |
| SUPFAM:SSF63829 | TMHMM:TMhelix | MapMan:50.4.3 | : | : | : |
Description
No Description!
Coordinates
chr5B:-:572546944..572549004
Molecular Weight (calculated)
43824.2 Da
IEP (calculated)
6.253
GRAVY (calculated)
-0.159
Length
399 amino acids
Sequence
(BLAST)
(BLAST)
001: MASAGVVAAA AVVAALAAFC ATDPMRLGSM ADFPGFEAHP VELPDAAEMP PHADAAERLR GAEIRFRGEV QGPESVAFDP LGRGPYTGVA DGRVLVWDGA
101: RWAYFAHASP DWTPERCGGP KASPMEYLKD EHVCGRALGI RFDKRTGDLY IADAYFGLSK VGPDGGLATP LATEAEGVRF NFTNDLDLDA DGNVYFTDSS
201: VLYQRRHFMQ LVFSGDASGR LLKYNPQTKE TTVLHRNLQF PNGVSLSKDG SFFVFCEGSR GRLSRYWLKG EKAGTVDLFA ILPGFPDNVR TNDKGEFWVA
301: IHCRRSAYAR LLSRRVELRK FLLSLPIPAK YHYLMQIGGN LHALIIKYSP DGEVLDILED TKGQVVRAVS EVEEKDGKLW IGSVLMPFIA VFDYAKESG
101: RWAYFAHASP DWTPERCGGP KASPMEYLKD EHVCGRALGI RFDKRTGDLY IADAYFGLSK VGPDGGLATP LATEAEGVRF NFTNDLDLDA DGNVYFTDSS
201: VLYQRRHFMQ LVFSGDASGR LLKYNPQTKE TTVLHRNLQF PNGVSLSKDG SFFVFCEGSR GRLSRYWLKG EKAGTVDLFA ILPGFPDNVR TNDKGEFWVA
301: IHCRRSAYAR LLSRRVELRK FLLSLPIPAK YHYLMQIGGN LHALIIKYSP DGEVLDILED TKGQVVRAVS EVEEKDGKLW IGSVLMPFIA VFDYAKESG
001: MALFLSPKTI TLLFFSLSLA LYCSIDPFHH CAISDFPNFV SHEVISPRPD EVPWERDSQN SLQKSKILFF NQIQGPESVA FDSLGRGPYT GVADGRVLFW
101: DGEKWIDFAY TSSNRSEICD PKPSALSYLR NEHICGRPLG LRFDKRTGDL YIADAYMGLL KVGPEGGLAT PLVTEAEGVP LGFTNDLDIA DDGTVYFTDS
201: SISYQRRNFL QLVFSGDNTG RVLKYDPVAK KAVVLVSNLQ FPNGVSISRD GSFFVFCEGD IGSLRRYWLK GEKAGTTDVF AYLPGHPDNV RTNQKGEFWV
301: ALHCRRNYYS YLMARYPKLR MFILRLPITA RTHYSFQIGL RPHGLVVKYS PEGKLMHVLE DSEGKVVRSV SEVEEKDGKL WMGSVLMNFV AVYDL
101: DGEKWIDFAY TSSNRSEICD PKPSALSYLR NEHICGRPLG LRFDKRTGDL YIADAYMGLL KVGPEGGLAT PLVTEAEGVP LGFTNDLDIA DDGTVYFTDS
201: SISYQRRNFL QLVFSGDNTG RVLKYDPVAK KAVVLVSNLQ FPNGVSISRD GSFFVFCEGD IGSLRRYWLK GEKAGTTDVF AYLPGHPDNV RTNQKGEFWV
301: ALHCRRNYYS YLMARYPKLR MFILRLPITA RTHYSFQIGL RPHGLVVKYS PEGKLMHVLE DSEGKVVRSV SEVEEKDGKL WMGSVLMNFV AVYDL
Arabidopsis Description
At5g22020 [Source:UniProtKB/TrEMBL;Acc:Q9C586]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.