CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 8
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G114720.1	Barley	plastid	43.72	91.58
HORVU5Hr1G095260.1	Barley	extracellular	86.68	86.47
TraesCS5B01G395100.1	Wheat	vacuole	86.18	85.96
Os03t0750700-01	Rice	plasma membrane	86.18	85.96
TraesCS5A01G390200.1	Wheat	golgi	85.93	85.93
TraesCS5D01G400000.1	Wheat	golgi	85.68	85.68
HORVU5Hr1G114800.1	Barley	extracellular	43.47	80.47
GSMUA_Achr3P30810_001	Banana	endoplasmic reticulum, vacuole	71.11	72.75
Zm00001d034032_P001	Maize	plasma membrane	97.24	71.8
VIT_06s0009g00850.t01	Wine grape	cytosol	62.81	71.23
Solyc06g073910.2.1	Tomato	cytosol, plasma membrane, vacuole	52.51	68.75
Bra018623.1-P	Field mustard	cytosol	58.04	65.81
CDX92388	Canola	vacuole	60.05	65.3
CDY16615	Canola	endoplasmic reticulum, extracellular, vacuole	64.07	64.56
PGSC0003DMT400015199	Potato	vacuole	63.32	64.45
AT5G22020.2	Thale cress	vacuole	63.57	64.05
Bra002383.1-P	Field mustard	vacuole	63.57	64.05
Solyc11g071800.1.1	Tomato	plastid, vacuole	62.81	63.94
PGSC0003DMT400007732	Potato	vacuole	62.56	63.68
AT1G08470.1	Thale cress	endoplasmic reticulum, vacuole	61.56	62.82
CDX93560	Canola	vacuole	60.55	61.32
CDX95058	Canola	vacuole	56.78	60.43
KRH26734	Soybean	vacuole	55.03	60.0
KRH56180	Soybean	endoplasmic reticulum	64.07	57.82
HORVU6Hr1G025030.1	Barley	cytosol	16.08	57.66
KRH22599	Soybean	vacuole	54.02	55.84
OQU75879	Sorghum	vacuole	32.41	42.16
KXG39404	Sorghum	golgi, vacuole	35.18	41.06
EER90208	Sorghum	vacuole	35.68	41.04
EES07680	Sorghum	golgi, vacuole	35.43	40.75
EES01763	Sorghum	vacuole	35.18	40.58
EES05895	Sorghum	golgi, vacuole	35.18	40.46
EES05427	Sorghum	vacuole	34.67	40.12
EER96672	Sorghum	vacuole	36.68	39.89
OQU85880	Sorghum	golgi, vacuole	34.67	39.88
EES17427	Sorghum	golgi, vacuole	34.17	39.65
EER96671	Sorghum	endoplasmic reticulum, golgi	34.67	39.43
EER92507	Sorghum	cytosol, golgi, mitochondrion, vacuole	40.7	39.32
EES01841	Sorghum	vacuole	34.17	39.19
OQU87434	Sorghum	golgi, vacuole	34.42	38.7
OQU76676	Sorghum	extracellular, golgi, vacuole	33.42	38.44
OQU79673	Sorghum	vacuole	32.91	38.3
KXG27696	Sorghum	vacuole	36.93	37.69
EES07950	Sorghum	vacuole	36.93	37.5
EES17425	Sorghum	extracellular	24.12	36.64
KXG36676	Sorghum	vacuole	27.14	30.0
KXG36678	Sorghum	vacuole	27.64	29.89
OQU92210	Sorghum	golgi, plastid, vacuole	29.15	26.19

Protein Annotations

Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	EntrezGene:8085932	UniProt:C5X0B5	EnsemblPlants:EER90869
ProteinID:EER90869	ProteinID:EER90869.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0016020	GO:GO:0016787	GO:GO:0016788	GO:GO:0016844	InterPro:IPR011042	PFAM:PF03088
PANTHER:PTHR10426	PANTHER:PTHR10426:SF24	EnsemblPlantsGene:SORBI_3001G088200	SUPFAM:SSF63829	unigene:Sbi.1292	SignalP:SignalP-noTM
InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	TMHMM:TMhelix	UniParc:UPI0001A82348	RefSeq:XP_002463871.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:6859544..6862532

Molecular Weight (calculated)

44276.1 Da

IEP (calculated)

6.793

GRAVY (calculated)

-0.200

Length

398 amino acids

Sequence
(BLAST)

001: MASPGLVAAA LLVAALAAFC GTDPLRMGSM VDFPGFEAHF VHLPDPAEMP PHADERERLR GAEVRFRGEV QGPESVAFDP QGRGPYTGVA DGRVVFWDGE
101: RWVPFATASP RWTQELCGGP KASPLEYLPN EHICGRPLGL RFDKKTGDLY IADAYFGLLK VGPEGGLATP LATEAEGVRL NFTNDLDLDD EGNVYFTDSS
201: IHYQRRNFMQ LVFSGDPSGR LLKYNPQTKE TTVLHRNLQF PNGVSMSKDG SFFVFCEGSR GRLSRYWLKG EKAGTVDLFA ILPGFPDNVR TNEKGEFWVA
301: IHCRRSLYAR LMSRYVKMRK FFLSLPIPAK YHYLMQIGGK LHAVIIKYSP EGQVLDILED TKGEVVRAVS EVEEKDGKLW IGSVLMPFIA VFDLAKAS

Best Arabidopsis Sequence Match ( AT5G22020.2 )
(BLAST)

001: MALFLSPKTI TLLFFSLSLA LYCSIDPFHH CAISDFPNFV SHEVISPRPD EVPWERDSQN SLQKSKILFF NQIQGPESVA FDSLGRGPYT GVADGRVLFW
101: DGEKWIDFAY TSSNRSEICD PKPSALSYLR NEHICGRPLG LRFDKRTGDL YIADAYMGLL KVGPEGGLAT PLVTEAEGVP LGFTNDLDIA DDGTVYFTDS
201: SISYQRRNFL QLVFSGDNTG RVLKYDPVAK KAVVLVSNLQ FPNGVSISRD GSFFVFCEGD IGSLRRYWLK GEKAGTTDVF AYLPGHPDNV RTNQKGEFWV
301: ALHCRRNYYS YLMARYPKLR MFILRLPITA RTHYSFQIGL RPHGLVVKYS PEGKLMHVLE DSEGKVVRSV SEVEEKDGKL WMGSVLMNFV AVYDL

Arabidopsis Description

At5g22020 [Source:UniProtKB/TrEMBL;Acc:Q9C586]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.