CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU79673	Sorghum	vacuole	73.47	73.68
EES17425	Sorghum	extracellular	48.1	62.98
OQU75879	Sorghum	vacuole	54.23	60.78
KXG39404	Sorghum	golgi, vacuole	59.48	59.82
EES01763	Sorghum	vacuole	57.14	56.81
EES01841	Sorghum	vacuole	55.1	54.47
OQU87434	Sorghum	golgi, vacuole	54.52	52.82
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	45.48	50.32
OQU85880	Sorghum	golgi, vacuole	49.85	49.42
EES07680	Sorghum	golgi, vacuole	49.85	49.42
EER90208	Sorghum	vacuole	49.56	49.13
EES05895	Sorghum	golgi, vacuole	49.27	48.84
EES05427	Sorghum	vacuole	48.69	48.55
OQU76676	Sorghum	extracellular, golgi, vacuole	47.81	47.4
VIT_13s0074g00070.t01	Wine grape	vacuole	37.03	46.35
EER96671	Sorghum	endoplasmic reticulum, golgi	46.06	45.14
GSMUA_Achr5P05340_001	Banana	vacuole	46.94	44.85
VIT_00s0575g00010.t01	Wine grape	vacuole	40.52	44.55
VIT_10s0042g00050.t01	Wine grape	vacuole	41.69	44.41
VIT_10s0071g00020.t01	Wine grape	vacuole	39.94	44.34
VIT_10s0042g00010.t01	Wine grape	vacuole	40.52	44.13
VIT_10s0042g00020.t01	Wine grape	vacuole	41.11	43.79
VIT_10s0071g00010.t01	Wine grape	vacuole	41.11	43.79
VIT_13s0074g00080.t01	Wine grape	vacuole	41.11	43.79
VIT_10s0042g00030.t01	Wine grape	vacuole	34.69	43.59
VIT_00s0575g00020.t01	Wine grape	vacuole	40.82	43.48
EER96672	Sorghum	vacuole	46.06	43.17
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	20.99	39.78
VIT_10s0071g00250.t01	Wine grape	vacuole	39.36	39.71
VIT_17s0000g04600.t01	Wine grape	vacuole	37.03	37.03
PGSC0003DMT400056839	Potato	vacuole	33.53	36.86
Solyc03g114550.1.1	Tomato	vacuole	28.57	35.77
KRH07462	Soybean	vacuole	36.15	35.73
KRH45407	Soybean	nucleus	36.15	35.53
PGSC0003DMT400063282	Potato	extracellular, vacuole	16.04	35.48
Solyc12g039070.1.1	Tomato	nucleus	34.4	35.44
EER90869	Sorghum	vacuole	39.65	34.17
CDX73037	Canola	vacuole	32.65	34.15
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	23.32	34.04
Solyc03g114560.2.1	Tomato	extracellular	32.36	33.95
AT1G74010.1	Thale cress	vacuole	32.07	33.85
PGSC0003DMT400063274	Potato	vacuole	32.94	33.63
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	27.11	33.57
KRH54773	Soybean	vacuole	32.94	33.53
Solyc03g114530.2.1	Tomato	vacuole	32.36	33.43
EES07950	Sorghum	vacuole	38.19	33.42
Solyc03g114540.1.1	Tomato	vacuole	32.65	33.33
PGSC0003DMT400063286	Potato	vacuole	32.36	33.23
KXG27696	Sorghum	vacuole	37.61	33.08
KRH56734	Soybean	vacuole	32.94	33.04
CDX96505	Canola	vacuole	31.49	32.93
PGSC0003DMT400063277	Potato	vacuole	31.78	32.83
Bra008126.1-P	Field mustard	vacuole	31.2	32.72
CDY47728	Canola	vacuole	31.2	32.72
CDX68204	Canola	vacuole	31.2	32.62
CDY45861	Canola	vacuole	31.2	32.42
KRH03206	Soybean	vacuole	31.49	32.14
CDY66188	Canola	vacuole	30.61	32.01
Bra003820.1-P	Field mustard	vacuole	30.03	31.89
Bra008127.1-P	Field mustard	vacuole	30.32	31.71
CDX96506	Canola	vacuole	29.74	31.38
CDY47729	Canola	vacuole	29.74	31.38
EER92507	Sorghum	cytosol, golgi, mitochondrion, vacuole	37.61	31.31
AT1G74000.1	Thale cress	vacuole	30.03	31.31
CDX96507	Canola	vacuole	29.74	31.29
Bra015943.1-P	Field mustard	vacuole	29.74	31.29
CDY45863	Canola	vacuole	29.45	31.08
CDX73038	Canola	vacuole	29.45	31.08
Bra008124.1-P	Field mustard	vacuole	29.45	31.08
CDY66189	Canola	vacuole	26.82	30.98
CDX73039	Canola	vacuole	29.15	30.67
VIT_17s0000g04610.t01	Wine grape	vacuole	32.65	30.52
AT1G74020.1	Thale cress	vacuole	29.45	30.15
KRH63133	Soybean	peroxisome, vacuole	13.99	27.75
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	36.44	27.59
KXG36678	Sorghum	vacuole	25.07	23.37
KXG36676	Sorghum	vacuole	24.49	23.33
OQU92210	Sorghum	golgi, plastid, vacuole	27.99	21.67
Bra015944.1-P	Field mustard	vacuole	29.15	16.75

Protein Annotations

Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	EntrezGene:8071495	UniProt:C5YSG1	EnsemblPlants:EES17427
ProteinID:EES17427	ProteinID:EES17427.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0016020	GO:GO:0016787	GO:GO:0016788	GO:GO:0016844	InterPro:IPR011042	PFAM:PF03088
PANTHER:PTHR10426	PANTHER:PTHR10426:SF56	EnsemblPlantsGene:SORBI_3008G177400	SUPFAM:SSF63829	SignalP:SignalP-noTM	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	UniParc:UPI0001A88159	RefSeq:XP_002443589.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr8:-:61143348..61144957

Molecular Weight (calculated)

37988.2 Da

IEP (calculated)

6.421

GRAVY (calculated)

-0.133

Length

343 amino acids

Sequence
(BLAST)

001: MSRLLFYLLI CLFCAGRRQI VGTAAAGTIH VRRRAFDFIP LPFGVTGAES LAFDRSGQGP YTGVSDGRVL RWDGSGRGWT TFAYSKNYAH NPFCRASTAR
101: PGDAEVVCGR PLGLQFDIRT GDLYIADAYH GLLRVGPAGG EAEVVAAQAD GKAFNFLNGV DVDQSTGDVY FTDSSTSYTR LHGALIFLTH ESSGRLMKYD
201: ARAKRVIVLK DGLPFPNGVA LSADRTHLVV AHTWPCQLFR YWLEGTKAGT YELFADLPGY PDNIRRDNRV GYWVALNQKK LDGETMEHIV GVHLDVKGKQ
301: LEEMTAEDKR VTLSDIVEED VKLWLGSVEL DYIIVVDQTL DCY

Best Arabidopsis Sequence Match ( AT3G57030.1 )
(BLAST)

001: MTMMIITVFL TVIAAVLAIL VKNSQTGSGI FAPPEISGSR DVFPSAKVVN LTGASGPESI AFDPAGEGPY VGVSDGRILK WRGEPLGWSD FAHTSSNRQE
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL

Arabidopsis Description

SSL10Protein STRICTOSIDINE SYNTHASE-LIKE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3D9]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.