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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • nucleus 1
  • mitochondrion 3
  • vacuole 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:cytosol, mitochondrion, nucleus, vacuole
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:vacuole
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d029115_P001 Maize extracellular, vacuole 70.92 92.73
Zm00001d029111_P001 Maize vacuole 88.56 80.18
Zm00001d029117_P001 Maize vacuole 88.24 79.88
Zm00001d029108_P001 Maize vacuole 82.68 79.81
KXG39404 Sorghum golgi, vacuole 87.25 78.3
HORVU6Hr1G026020.1 Barley cytosol 60.13 74.19
HORVU5Hr1G009400.2 Barley cytosol, mitochondrion, plastid, vacuole 32.35 72.79
EES01763 Sorghum vacuole 77.78 68.99
TraesCS3A01G256600.1 Wheat vacuole 72.88 66.37
TraesCS2D01G076000.1 Wheat golgi, vacuole 74.18 66.18
EES01841 Sorghum vacuole 74.84 65.99
TraesCS5B01G382800.1 Wheat vacuole 73.53 65.98
TraesCS2B01G093000.1 Wheat golgi, vacuole 73.86 65.89
TraesCS2B01G092900.1 Wheat golgi, vacuole 73.53 65.79
TraesCS3B01G289800.1 Wheat vacuole 72.22 65.77
TraesCS2A01G078000.1 Wheat vacuole 73.53 65.6
TraesCS2D01G076200.1 Wheat vacuole 73.53 65.6
TraesCS5B01G383000.1 Wheat vacuole 72.55 65.49
HORVU5Hr1G093840.1 Barley vacuole 72.22 65.19
TraesCS2D01G076400.1 Wheat vacuole 72.88 65.01
TraesCSU01G189700.1 Wheat vacuole 72.88 65.01
HORVU2Hr1G012970.2 Barley mitochondrion 73.86 64.57
OQU87434 Sorghum golgi, vacuole 74.18 64.12
HORVU3Hr1G065520.3 Barley extracellular 66.99 63.66
Os08t0175000-00 Rice golgi, mitochondrion, vacuole 73.86 63.48
TraesCS5D01G389100.1 Wheat plastid, vacuole 73.53 63.38
HORVU2Hr1G013460.2 Barley golgi, mitochondrion, vacuole 59.8 62.89
TraesCS3D01G256900.1 Wheat mitochondrion, plastid 72.55 62.18
TraesCS2D01G076300.1 Wheat vacuole 69.93 61.85
OQU79673 Sorghum vacuole 65.69 58.77
Os01t0698200-00 Rice mitochondrion 55.56 58.62
Os08t0442200-01 Rice extracellular 64.05 56.0
EES17427 Sorghum golgi, vacuole 60.78 54.23
OQU76676 Sorghum extracellular, golgi, vacuole 53.27 47.11
EES07680 Sorghum golgi, vacuole 52.94 46.82
EES05895 Sorghum golgi, vacuole 52.61 46.53
EES05427 Sorghum vacuole 52.29 46.51
EER90208 Sorghum vacuole 52.29 46.24
OQU85880 Sorghum golgi, vacuole 52.29 46.24
EES17425 Sorghum extracellular 39.54 46.18
GSMUA_Achr3P06240_001 Banana cytosol, mitochondrion, peroxisome, vacuole 45.75 45.16
EER96671 Sorghum endoplasmic reticulum, golgi 51.31 44.86
EER96672 Sorghum vacuole 51.96 43.44
VIT_10s0042g00010.t01 Wine grape vacuole 43.46 42.22
GSMUA_Achr5P05340_001 Banana vacuole 49.02 41.78
VIT_00s0575g00010.t01 Wine grape vacuole 42.16 41.35
VIT_10s0071g00020.t01 Wine grape vacuole 41.5 41.1
VIT_10s0042g00020.t01 Wine grape vacuole 42.81 40.68
VIT_10s0042g00050.t01 Wine grape vacuole 42.81 40.68
VIT_13s0074g00070.t01 Wine grape vacuole 36.27 40.51
VIT_00s0575g00020.t01 Wine grape vacuole 42.48 40.37
VIT_10s0071g00010.t01 Wine grape vacuole 41.83 39.75
VIT_13s0074g00080.t01 Wine grape vacuole 41.83 39.75
VIT_10s0042g00030.t01 Wine grape vacuole 33.99 38.1
VIT_10s0071g00250.t01 Wine grape vacuole 41.18 37.06
KRH07462 Soybean vacuole 41.18 36.31
PGSC0003DMT400056839 Potato vacuole 36.93 36.22
VIT_17s0000g04600.t01 Wine grape vacuole 40.2 35.86
Bra008125.1-P Field mustard cytosol, peroxisome, vacuole 27.45 35.74
KRH45407 Soybean nucleus 40.2 35.24
VIT_17s0000g04580.t01 Wine grape extracellular, vacuole 20.59 34.81
Solyc12g039070.1.1 Tomato nucleus 37.25 34.23
Solyc03g114550.1.1 Tomato vacuole 30.39 33.94
CDX73037 Canola vacuole 36.27 33.84
PGSC0003DMT400001736 Potato cytosol, peroxisome, vacuole 30.39 33.57
KRH03206 Soybean vacuole 36.6 33.33
KRH56734 Soybean vacuole 36.93 33.04
KRH54773 Soybean vacuole 36.27 32.94
PGSC0003DMT400063277 Potato vacuole 35.62 32.83
CDX96505 Canola vacuole 34.97 32.62
CDY66188 Canola vacuole 34.97 32.62
AT1G74010.1 Thale cress vacuole 34.64 32.62
Bra003820.1-P Field mustard vacuole 34.31 32.51
EER90869 Sorghum vacuole 42.16 32.41
KRH63133 Soybean peroxisome, vacuole 18.3 32.37
Bra008127.1-P Field mustard vacuole 34.64 32.32
Solyc03g114530.2.1 Tomato vacuole 34.97 32.23
Solyc03g114560.2.1 Tomato extracellular 34.31 32.11
CDX68204 Canola vacuole 34.31 32.01
EES07950 Sorghum vacuole 40.85 31.89
CDY45861 Canola vacuole 34.31 31.82
Bra008126.1-P Field mustard vacuole 33.99 31.8
CDY47728 Canola vacuole 33.99 31.8
KXG27696 Sorghum vacuole 40.52 31.79
PGSC0003DMT400063282 Potato extracellular, vacuole 16.01 31.61
PGSC0003DMT400063274 Potato vacuole 34.31 31.25
Solyc03g114540.1.1 Tomato vacuole 34.31 31.25
PGSC0003DMT400063286 Potato vacuole 33.99 31.14
AT1G74020.1 Thale cress vacuole 33.99 31.04
CDY66189 Canola vacuole 30.07 30.98
EER92507 Sorghum cytosol, golgi, mitochondrion, vacuole 41.5 30.83
CDX73038 Canola vacuole 32.68 30.77
CDX96506 Canola vacuole 32.68 30.77
CDY47729 Canola vacuole 32.68 30.77
AT1G74000.1 Thale cress vacuole 33.01 30.7
Bra008124.1-P Field mustard vacuole 32.35 30.46
Bra015943.1-P Field mustard vacuole 32.35 30.37
CDX96507 Canola vacuole 32.35 30.37
VIT_17s0000g04610.t01 Wine grape vacuole 36.27 30.25
CDY45863 Canola vacuole 32.03 30.15
CDX73039 Canola vacuole 31.7 29.75
VIT_17s0000g04590.t01 Wine grape endoplasmic reticulum, peroxisome, vacuole 39.87 26.93
KXG36676 Sorghum vacuole 28.43 24.17
KXG36678 Sorghum vacuole 27.78 23.1
OQU92210 Sorghum golgi, plastid, vacuole 29.74 20.54
Bra015944.1-P Field mustard vacuole 32.35 16.58
Protein Annotations
EnsemblPlants:OQU75879EnsemblPlantsGene:SORBI_3010G049800Gene3D:2.120.10.30GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0016844InterPro:6-blade_b-propeller_TolB-likeInterPro:IPR011042InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthasePANTHER:PTHR10426PANTHER:PTHR10426:SF56PFAM:PF03088ProteinID:OQU75879ProteinID:OQU75879.1
SEG:segSUPFAM:SSF63829UniParc:UPI0009DC934EUniProt:A0A1W0VRH6MapMan:50.4.3:
Description
hypothetical protein
Coordinates
chr10:+:3845777..3846747
Molecular Weight (calculated)
32787.9 Da
IEP (calculated)
4.719
GRAVY (calculated)
-0.184
Length
306 amino acids
Sequence
(BLAST)
001: MEHAAPLLLA LRPRVPAPGF HLPLPDGVTG AESLAFDRRG QGPYAGVSDG RPELPEDPLC TASVVPSEQT ESMCGRPLGL QFFAMTGDLY IADAYMGLMK
101: VGPDGGEAQV VATQADDGKP FHFVNGLDVD QATGDVYFTD SSATYPRRFN TEIMVNADAT GRLLRYDART KQVAVLKADL PYPNGVAVST DRTQVVVAHT
201: VPCQAFRYWL KGPKAGQYEL LADLPGYPDN VRRDARGGYW VALNQEKARL DATAPPAKHL VGVRLGVDGA AVEELTAGKG VTLSDVSEKD GQLWLGSVEL
301: DYVGLV
Best Arabidopsis Sequence Match ( AT2G41290.1 )
(BLAST)
001: MMKLLLVVAT SVALIFSVTD LSGEGPKHGG ESMLTVQIPD FRLIPTTGAL GPESFVFDFF GDGPYTGLSD GRIVKWLANE SRWIDFAVTT SAREGCEGPH
101: EHQRTEHVCG RPLGLAFDKS TGDLYIADAY MGLLKVGPTG GVATQVLPRE LNEALRFTNS LDINPRTGVV YFTDSSSVYQ RRNYIGAMMS GDKTGRLMKY
201: DNTKQVTTLL SNLAFVNGVA LSQNGDYLLV VETAMCRILR YWLNETSVKS QSHDNYEIFA EGLPGFPDNI KRSPRGGFWV GLNTKHSKLT KFAMSNAWLG
301: RAALGLPVDW MKVHSVWARY NGNGMAVRLS EDSGVILEVF EGKNENKWIS ISEVEEKDGT LWVGSVNTPF AGMYKI
Arabidopsis Description
SSL2Protein STRICTOSIDINE SYNTHASE-LIKE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLG8]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.