Factsheet for TraesCS2D01G076000.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G076200.1	Wheat	vacuole	96.21	96.21
TraesCS2D01G076400.1	Wheat	vacuole	95.04	95.04
HORVU5Hr1G009400.2	Barley	cytosol, mitochondrion, plastid, vacuole	35.28	88.97
TraesCS2D01G076300.1	Wheat	vacuole	86.01	85.26
Zm00001d029115_P001	Maize	extracellular, vacuole	53.64	78.63
Zm00001d029108_P001	Maize	vacuole	70.85	76.66
Zm00001d029117_P001	Maize	vacuole	74.64	75.74
Zm00001d029111_P001	Maize	vacuole	74.64	75.74
KXG39404	Sorghum	golgi, vacuole	74.05	74.49
OQU75879	Sorghum	vacuole	66.18	74.18
Os08t0175000-00	Rice	golgi, mitochondrion, vacuole	76.09	73.31
TraesCS5D01G389100.1	Wheat	plastid, vacuole	70.55	68.17
TraesCS3D01G256900.1	Wheat	mitochondrion, plastid	70.55	67.79
Os08t0442200-01	Rice	extracellular	66.18	64.86
TraesCS3D01G504000.1	Wheat	vacuole	51.31	51.01
TraesCS5D01G202700.1	Wheat	vacuole	51.31	50.87
TraesCS3D01G503900.1	Wheat	nucleus	45.77	50.48
TraesCS7D01G075900.1	Wheat	vacuole	50.73	50.43
TraesCS7D01G139900.1	Wheat	vacuole	50.73	50.0
TraesCS3D01G303900.1	Wheat	cytosol	46.65	50.0
TraesCS7D01G076600.1	Wheat	cytosol	30.32	49.76
TraesCS7D01G076500.1	Wheat	cytosol	27.41	49.47
TraesCS7D01G140000.1	Wheat	golgi, vacuole	50.15	49.43
TraesCS7D01G140500.1	Wheat	golgi, vacuole	49.27	48.99
TraesCS7D01G076000.1	Wheat	vacuole	48.1	48.39
TraesCS7D01G140600.1	Wheat	endoplasmic reticulum, plasma membrane	43.15	48.21
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	43.15	47.74
VIT_10s0042g00010.t01	Wine grape	vacuole	42.27	46.03
TraesCS7D01G076300.1	Wheat	vacuole	48.1	45.71
GSMUA_Achr5P05340_001	Banana	vacuole	47.81	45.68
TraesCS5D01G202800.1	Wheat	golgi, vacuole	48.4	45.6
VIT_13s0074g00070.t01	Wine grape	vacuole	35.86	44.89
VIT_00s0575g00010.t01	Wine grape	vacuole	40.82	44.87
VIT_10s0071g00020.t01	Wine grape	vacuole	40.23	44.66
VIT_10s0042g00020.t01	Wine grape	vacuole	41.69	44.41
VIT_10s0042g00050.t01	Wine grape	vacuole	41.4	44.1
VIT_00s0575g00020.t01	Wine grape	vacuole	41.11	43.79
VIT_10s0071g00010.t01	Wine grape	vacuole	40.82	43.48
VIT_13s0074g00080.t01	Wine grape	vacuole	40.52	43.17
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	22.74	43.09
VIT_10s0042g00030.t01	Wine grape	vacuole	33.24	41.76
PGSC0003DMT400056839	Potato	vacuole	36.73	40.38
VIT_17s0000g04600.t01	Wine grape	vacuole	39.65	39.65
PGSC0003DMT400063282	Potato	extracellular, vacuole	17.78	39.35
KRH07462	Soybean	vacuole	39.36	38.9
VIT_10s0071g00250.t01	Wine grape	vacuole	38.48	38.82
KRH45407	Soybean	nucleus	38.78	38.11
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	30.32	37.55
Solyc12g039070.1.1	Tomato	nucleus	36.15	37.24
PGSC0003DMT400063277	Potato	vacuole	35.28	36.45
Solyc03g114560.2.1	Tomato	extracellular	34.69	36.39
PGSC0003DMT400063274	Potato	vacuole	35.57	36.31
CDX73037	Canola	vacuole	34.69	36.28
TraesCS5D01G400000.1	Wheat	golgi	41.98	36.18
Solyc03g114550.1.1	Tomato	vacuole	28.86	36.13
Solyc03g114530.2.1	Tomato	vacuole	34.69	35.84
PGSC0003DMT400063286	Potato	vacuole	34.4	35.33
Bra003820.1-P	Field mustard	vacuole	33.24	35.29
Solyc03g114540.1.1	Tomato	vacuole	34.4	35.12
AT1G74010.1	Thale cress	vacuole	33.24	35.08
CDX96505	Canola	vacuole	33.53	35.06
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	23.91	34.89
KRH54773	Soybean	vacuole	33.82	34.42
KRH03206	Soybean	vacuole	33.53	34.23
AT1G74000.1	Thale cress	vacuole	32.65	34.04
TraesCS4D01G215800.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	40.52	33.66
KRH56734	Soybean	vacuole	33.53	33.63
Bra008127.1-P	Field mustard	vacuole	32.07	33.54
Bra008126.1-P	Field mustard	vacuole	31.78	33.33
CDY47728	Canola	vacuole	31.78	33.33
CDY45861	Canola	vacuole	32.07	33.33
TraesCS5D01G139700.1	Wheat	vacuole	36.15	33.24
VIT_17s0000g04610.t01	Wine grape	vacuole	35.57	33.24
CDX68204	Canola	vacuole	31.78	33.23
CDY66188	Canola	vacuole	31.78	33.23
CDY66189	Canola	vacuole	28.57	33.0
KRH63133	Soybean	peroxisome, vacuole	16.62	32.95
AT1G74020.1	Thale cress	vacuole	32.07	32.84
Bra015943.1-P	Field mustard	vacuole	31.2	32.82
CDX96507	Canola	vacuole	31.2	32.82
CDX96506	Canola	vacuole	30.61	32.31
CDY47729	Canola	vacuole	30.61	32.31
CDX73039	Canola	vacuole	30.61	32.21
Bra008124.1-P	Field mustard	vacuole	30.32	32.0
CDY45863	Canola	vacuole	30.03	31.69
CDX73038	Canola	vacuole	30.03	31.69
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	38.78	29.36
TraesCS2D01G177900.2	Wheat	golgi	27.7	26.03
TraesCS1D01G207200.2	Wheat	extracellular, golgi, vacuole	27.7	25.89
TraesCS2D01G177700.1	Wheat	plasma membrane, vacuole	27.41	25.61
Bra015944.1-P	Field mustard	vacuole	30.32	17.42

Protein Annotations

EnsemblPlants:TraesCS2D01G076000.1	EnsemblPlantsGene:TraesCS2D01G076000	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF56	PFAM:PF03088	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF63829	TMHMM:TMhelix	MapMan:50.4.3	:	:	:

Description

No Description!

Coordinates

chr2D:-:32520360..32521489

Molecular Weight (calculated)

36756.8 Da

IEP (calculated)

6.513

GRAVY (calculated)

-0.094

Length

343 amino acids

Sequence
(BLAST)

001: MGRRGSASGW LVLLLALLAV SLVPSCAAAE VKTSPTEWSL HLPLPNGVTG AESLAFDARG QGPYTGVSDG RVLKWGGSAV GWTTFTFHAN YRKFPMCTVP
101: VAPSEETESL CGRPLGLAFH RKSGDLYIAD AYKGLMRVGP DGGEAEVLAT GAGGVPFNFV NGIDIDQATG DVYFTDSSVT YPRRFNTEIM MNADATGRLL
201: KYDALTKQVT VLKDGLPYPN GVAVSHDRTY VVVAHTVPCQ AHRYYLQGPK AGHYELLADL PGYPDNVRRD EKGGYWVALN QEKGRPGVTT APVKHLVGVR
301: LDGGGVEVEE LTAAKGVTLS EVTERKGQLW LGSVELDYIG LVV

Best Arabidopsis Sequence Match ( AT3G57030.1 )
(BLAST)

001: MTMMIITVFL TVIAAVLAIL VKNSQTGSGI FAPPEISGSR DVFPSAKVVN LTGASGPESI AFDPAGEGPY VGVSDGRILK WRGEPLGWSD FAHTSSNRQE
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL

Arabidopsis Description

SSL10Protein STRICTOSIDINE SYNTHASE-LIKE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3D9]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.