Factsheet for TraesCS3D01G303900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G298200.1	Wheat	cytosol	94.69	95.58
TraesCS3B01G338500.1	Wheat	extracellular, golgi, vacuole	93.12	86.88
TraesCS7D01G076600.1	Wheat	cytosol	50.0	76.56
TraesCS7D01G076500.1	Wheat	cytosol	45.31	76.32
HORVU3Hr1G074780.3	Barley	cytosol, vacuole	88.75	75.94
TraesCS3D01G503900.1	Wheat	nucleus	70.31	72.35
TraesCS7D01G075900.1	Wheat	vacuole	75.0	69.57
TraesCS3D01G504000.1	Wheat	vacuole	74.69	69.28
TraesCS7D01G076000.1	Wheat	vacuole	72.81	68.33
TraesCS7D01G140500.1	Wheat	golgi, vacuole	70.62	65.51
TraesCS7D01G140000.1	Wheat	golgi, vacuole	70.62	64.94
TraesCS7D01G139900.1	Wheat	vacuole	69.69	64.08
EES05895	Sorghum	golgi, vacuole	67.81	62.72
TraesCS7D01G140600.1	Wheat	endoplasmic reticulum, plasma membrane	59.69	62.22
EES07680	Sorghum	golgi, vacuole	67.19	62.14
EES05427	Sorghum	vacuole	66.56	61.92
EER90208	Sorghum	vacuole	66.88	61.85
OQU85880	Sorghum	golgi, vacuole	66.56	61.56
Os07t0543600-00	Rice	golgi, vacuole	63.12	57.71
TraesCS2D01G076300.1	Wheat	vacuole	50.94	47.11
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	45.31	46.77
TraesCS2D01G076000.1	Wheat	golgi, vacuole	50.0	46.65
TraesCS2D01G076200.1	Wheat	vacuole	49.69	46.36
TraesCS2D01G076400.1	Wheat	vacuole	49.38	46.06
TraesCS3D01G256900.1	Wheat	mitochondrion, plastid	50.0	44.82
TraesCS5D01G202800.1	Wheat	golgi, vacuole	50.94	44.78
TraesCS7D01G076300.1	Wheat	vacuole	50.0	44.32
TraesCS5D01G389100.1	Wheat	plastid, vacuole	49.06	44.23
TraesCS5D01G202700.1	Wheat	vacuole	47.5	43.93
GSMUA_Achr5P05340_001	Banana	vacuole	46.88	41.78
PGSC0003DMT400056839	Potato	vacuole	38.12	39.1
VIT_13s0074g00070.t01	Wine grape	vacuole	33.44	39.05
VIT_10s0042g00010.t01	Wine grape	vacuole	38.44	39.05
VIT_10s0071g00020.t01	Wine grape	vacuole	36.56	37.86
VIT_00s0575g00010.t01	Wine grape	vacuole	36.88	37.82
VIT_10s0042g00030.t01	Wine grape	vacuole	32.19	37.73
VIT_13s0074g00080.t01	Wine grape	vacuole	37.81	37.58
VIT_10s0042g00020.t01	Wine grape	vacuole	37.81	37.58
VIT_00s0575g00020.t01	Wine grape	vacuole	37.5	37.27
VIT_10s0042g00050.t01	Wine grape	vacuole	37.5	37.27
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	27.19	37.02
VIT_10s0071g00010.t01	Wine grape	vacuole	37.19	36.96
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	31.88	36.82
Solyc12g039070.1.1	Tomato	nucleus	37.5	36.04
KRH03206	Soybean	vacuole	37.81	36.01
KRH56734	Soybean	vacuole	38.12	35.67
KRH07462	Soybean	vacuole	38.44	35.45
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	19.69	34.81
AT1G74010.1	Thale cress	vacuole	35.31	34.77
Solyc03g114560.2.1	Tomato	extracellular	35.0	34.25
VIT_10s0071g00250.t01	Wine grape	vacuole	36.25	34.12
KRH45407	Soybean	nucleus	36.88	33.81
PGSC0003DMT400063282	Potato	extracellular, vacuole	16.25	33.55
CDY47728	Canola	vacuole	33.75	33.03
Bra008126.1-P	Field mustard	vacuole	33.75	33.03
TraesCS5D01G139700.1	Wheat	vacuole	38.44	32.98
KRH54773	Soybean	vacuole	34.69	32.94
CDX73037	Canola	vacuole	33.75	32.93
Bra008124.1-P	Field mustard	vacuole	33.44	32.92
CDY47729	Canola	vacuole	33.44	32.92
Solyc03g114550.1.1	Tomato	vacuole	28.12	32.85
CDX96505	Canola	vacuole	33.44	32.62
CDY45863	Canola	vacuole	33.12	32.62
AT1G74000.1	Thale cress	vacuole	33.44	32.52
Bra003820.1-P	Field mustard	vacuole	32.81	32.51
Solyc03g114540.1.1	Tomato	vacuole	34.06	32.44
PGSC0003DMT400063274	Potato	vacuole	34.06	32.44
PGSC0003DMT400063286	Potato	vacuole	33.75	32.34
AT1G74020.1	Thale cress	vacuole	33.75	32.24
VIT_17s0000g04600.t01	Wine grape	vacuole	34.38	32.07
CDX73038	Canola	vacuole	32.5	32.0
CDX96506	Canola	vacuole	32.5	32.0
PGSC0003DMT400063277	Potato	vacuole	33.12	31.93
CDY45861	Canola	vacuole	32.81	31.82
CDY66189	Canola	vacuole	29.38	31.65
VIT_17s0000g04610.t01	Wine grape	vacuole	36.25	31.61
CDX96507	Canola	vacuole	32.19	31.6
Bra015943.1-P	Field mustard	vacuole	32.19	31.6
CDY66188	Canola	vacuole	32.19	31.4
CDX68204	Canola	vacuole	32.19	31.4
Bra008127.1-P	Field mustard	vacuole	32.19	31.4
Solyc03g114530.2.1	Tomato	vacuole	32.5	31.33
TraesCS5D01G400000.1	Wheat	golgi	38.75	31.16
CDX73039	Canola	vacuole	31.56	30.98
TraesCS4D01G215800.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	38.75	30.02
KRH63133	Soybean	peroxisome, vacuole	15.31	28.32
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	39.38	27.81
TraesCS1D01G207200.2	Wheat	extracellular, golgi, vacuole	31.88	27.79
TraesCS2D01G177900.2	Wheat	golgi	28.44	24.93
TraesCS2D01G177700.1	Wheat	plasma membrane, vacuole	28.44	24.8
Bra015944.1-P	Field mustard	vacuole	30.94	16.58

Protein Annotations

EnsemblPlants:TraesCS3D01G303900.1	EnsemblPlantsGene:TraesCS3D01G303900	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF28	PFAM:PF03088	SUPFAM:SSF63829	MapMan:50.4.3

Description

No Description!

Coordinates

chr3D:-:418417377..418418339

Molecular Weight (calculated)

34866.2 Da

IEP (calculated)

7.299

GRAVY (calculated)

-0.456

Length

320 amino acids

Sequence
(BLAST)

001: MAATSLDATR IQQLPLADGL LQGPESVAFD AQGHGPYSGV SDGRILRWDG DKIGWTTYAY GPGYDEDMCT ASIFRSATST ESQCGRPLGL QFHHKSGDLY
101: VADAYRGLMR IGPGGGEATV LVNAIDDKPL RFTNGVDIDQ VTGQIYFTDS SMNYDRTHHE LVTRSGDSTG RLMRYDPRTG DVAVLQTRLA YANGVAISTD
201: RTHLIVASTG PCKLLRHWIK GSKAGTSEPF ADLPGYPDNV RPDRRGGYWV ALHGEKNELP SRPNSHLLAV RIGADGKILE EMRGPKRVKP AEVMERDNGK
301: LYIGSIDLPY VGIVTRKQGG

Best Arabidopsis Sequence Match ( AT1G08470.1 )
(BLAST)

001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP

Arabidopsis Description

SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.