Factsheet for TraesCS3A01G298200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G303900.1	Wheat	cytosol	95.58	94.69
TraesCS3B01G338500.1	Wheat	extracellular, golgi, vacuole	94.64	87.46
HORVU3Hr1G074780.3	Barley	cytosol, vacuole	89.27	75.67
TraesCS7A01G138700.1	Wheat	cytosol	47.63	72.25
TraesCS7A01G138300.1	Wheat	cytosol	47.0	71.29
TraesCS3A01G496700.1	Wheat	golgi, vacuole	76.03	69.86
TraesCS3A01G496900.1	Wheat	vacuole	75.39	68.29
TraesCS1A01G026500.1	Wheat	vacuole	74.13	68.12
TraesCS1A01G437900.1	Wheat	cytosol	39.75	67.74
EES05895	Sorghum	golgi, vacuole	68.77	63.01
TraesCS7A01G138800.1	Wheat	golgi, vacuole	60.25	62.62
EES07680	Sorghum	golgi, vacuole	68.14	62.43
EER90208	Sorghum	vacuole	67.82	62.14
EES05427	Sorghum	vacuole	67.19	61.92
OQU85880	Sorghum	golgi, vacuole	67.51	61.85
Os07t0543600-00	Rice	golgi, vacuole	64.35	58.29
TraesCS2A01G260200.1	Wheat	mitochondrion, vacuole	59.94	54.91
TraesCS3A01G256600.1	Wheat	vacuole	51.1	48.21
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	46.37	47.42
TraesCS2A01G078000.1	Wheat	vacuole	49.53	45.77
TraesCS5A01G188200.1	Wheat	vacuole	51.42	44.9
GSMUA_Achr5P05340_001	Banana	vacuole	47.95	42.34
TraesCS5A01G188300.1	Wheat	extracellular, plasma membrane, vacuole	47.63	40.05
PGSC0003DMT400056839	Potato	vacuole	39.12	39.74
VIT_13s0074g00070.t01	Wine grape	vacuole	34.07	39.42
VIT_10s0042g00010.t01	Wine grape	vacuole	39.12	39.37
VIT_00s0575g00010.t01	Wine grape	vacuole	37.85	38.46
VIT_13s0074g00080.t01	Wine grape	vacuole	38.49	37.89
VIT_10s0042g00020.t01	Wine grape	vacuole	38.49	37.89
VIT_00s0575g00020.t01	Wine grape	vacuole	38.49	37.89
VIT_10s0071g00020.t01	Wine grape	vacuole	36.91	37.86
VIT_10s0042g00030.t01	Wine grape	vacuole	32.49	37.73
VIT_10s0042g00050.t01	Wine grape	vacuole	37.85	37.27
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	32.49	37.18
VIT_10s0071g00010.t01	Wine grape	vacuole	37.54	36.96
TraesCS5A01G131200.1	Wheat	vacuole	29.34	36.76
Solyc12g039070.1.1	Tomato	nucleus	38.49	36.64
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	20.5	35.91
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	26.5	35.74
KRH07462	Soybean	vacuole	38.8	35.45
KRH03206	Soybean	vacuole	37.54	35.42
KRH56734	Soybean	vacuole	37.85	35.09
AT1G74010.1	Thale cress	vacuole	35.96	35.08
Solyc03g114560.2.1	Tomato	extracellular	35.65	34.56
CDX73037	Canola	vacuole	35.33	34.15
VIT_10s0071g00250.t01	Wine grape	vacuole	36.59	34.12
KRH45407	Soybean	nucleus	37.54	34.1
CDX96505	Canola	vacuole	35.02	33.84
Bra003820.1-P	Field mustard	vacuole	34.38	33.75
PGSC0003DMT400063282	Potato	extracellular, vacuole	16.4	33.55
KRH54773	Soybean	vacuole	35.65	33.53
Bra008126.1-P	Field mustard	vacuole	34.38	33.33
CDY47728	Canola	vacuole	34.38	33.33
PGSC0003DMT400063274	Potato	vacuole	35.33	33.33
Solyc03g114540.1.1	Tomato	vacuole	35.02	33.04
VIT_17s0000g04600.t01	Wine grape	vacuole	35.65	32.94
PGSC0003DMT400063286	Potato	vacuole	34.7	32.93
Bra008127.1-P	Field mustard	vacuole	34.07	32.93
Solyc03g114550.1.1	Tomato	vacuole	28.39	32.85
PGSC0003DMT400063277	Potato	vacuole	34.38	32.83
CDY45861	Canola	vacuole	34.07	32.73
VIT_17s0000g04610.t01	Wine grape	vacuole	37.85	32.7
CDY66189	Canola	vacuole	30.6	32.66
CDX68204	Canola	vacuole	33.75	32.62
CDY66188	Canola	vacuole	33.75	32.62
AT1G74020.1	Thale cress	vacuole	34.38	32.54
CDX96506	Canola	vacuole	33.12	32.31
CDX73038	Canola	vacuole	33.12	32.31
Solyc03g114530.2.1	Tomato	vacuole	33.75	32.23
AT1G74000.1	Thale cress	vacuole	33.44	32.22
TraesCS5A01G390200.1	Wheat	golgi	40.38	32.16
CDY47729	Canola	vacuole	32.81	32.0
Bra008124.1-P	Field mustard	vacuole	32.81	32.0
CDY45863	Canola	vacuole	32.49	31.69
CDX96507	Canola	vacuole	32.18	31.29
Bra015943.1-P	Field mustard	vacuole	32.18	31.29
CDX73039	Canola	vacuole	31.55	30.67
TraesCS4A01G089000.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	38.17	29.3
TraesCS1A01G203800.1	Wheat	cytosol, plastid, vacuole	22.4	29.1
TraesCS2A01G170300.1	Wheat	cytosol	29.34	29.06
KRH63133	Soybean	peroxisome, vacuole	15.46	28.32
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	40.06	28.04
TraesCS2A01G170200.1	Wheat	plasma membrane, vacuole	28.71	22.98
Bra015944.1-P	Field mustard	vacuole	31.86	16.92

Protein Annotations

EnsemblPlants:TraesCS3A01G298200.1	EnsemblPlantsGene:TraesCS3A01G298200	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF28	PFAM:PF03088	SUPFAM:SSF63829	MapMan:50.4.3

Description

No Description!

Coordinates

chr3A:+:532640521..532641474

Molecular Weight (calculated)

34809.2 Da

IEP (calculated)

7.653

GRAVY (calculated)

-0.473

Length

317 amino acids

Sequence
(BLAST)

001: MAATSLDATR IQQLPLADGL LQGPESVAFD AQGHGPYSGV SDGRILRWDG DKIGWTTYAY GPGYDEDMCR ASIFRPATSI ESQCGRPLGL QFHHKSGDLY
101: VADAYRGLMR VGPRGGEATV LVNAVDDKPL RFTNRVDVDQ VTGQVYFTDS SMNYDRTNHE LVTRSGDSTG RLMRYDPRTG DVAVLQTRLA YANGVAISTD
201: RTHLIVASTG PCKLLRHWIK GAKAGTSEPF ADLPGYPDNV RPDRRGGYWV ALHGEKNELP SRPNSHMLAV RIGADGEILE EMRGPKRVKP AEVMERDNGK
301: LYIGSIDLPY VGVVTRK

Best Arabidopsis Sequence Match ( AT1G08470.1 )
(BLAST)

001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP

Arabidopsis Description

SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.