Factsheet for TraesCS5A01G188300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G202700.1	Wheat	vacuole	87.8	95.66
TraesCS5B01G195300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	87.53	95.38
HORVU5Hr1G058910.2	Barley	endoplasmic reticulum, extracellular, vacuole	85.41	93.06
Zm00001d020306_P001	Maize	endoplasmic reticulum, vacuole	66.84	73.47
EER96671	Sorghum	endoplasmic reticulum, golgi	66.58	71.71
TraesCS5A01G188200.1	Wheat	vacuole	52.79	54.82
TraesCS3A01G256600.1	Wheat	vacuole	44.83	50.3
TraesCS2A01G078000.1	Wheat	vacuole	45.36	49.85
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	40.58	49.35
TraesCS3A01G298200.1	Wheat	cytosol	40.05	47.63
TraesCS3A01G496700.1	Wheat	golgi, vacuole	42.97	46.96
TraesCS7A01G138300.1	Wheat	cytosol	25.99	46.89
TraesCS1A01G026500.1	Wheat	vacuole	42.18	46.09
TraesCS3A01G496900.1	Wheat	vacuole	42.71	46.0
TraesCS7A01G138700.1	Wheat	cytosol	25.46	45.93
VIT_10s0042g00010.t01	Wine grape	vacuole	36.6	43.81
GSMUA_Achr5P05340_001	Banana	vacuole	41.64	43.73
VIT_13s0074g00070.t01	Wine grape	vacuole	31.3	43.07
VIT_00s0575g00010.t01	Wine grape	vacuole	35.54	42.95
TraesCS7A01G138800.1	Wheat	golgi, vacuole	34.48	42.62
VIT_10s0042g00020.t01	Wine grape	vacuole	36.34	42.55
VIT_10s0071g00020.t01	Wine grape	vacuole	34.75	42.39
VIT_13s0074g00080.t01	Wine grape	vacuole	36.07	42.24
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	26.26	42.13
VIT_10s0042g00030.t01	Wine grape	vacuole	30.24	41.76
VIT_00s0575g00020.t01	Wine grape	vacuole	35.54	41.61
VIT_10s0042g00050.t01	Wine grape	vacuole	35.54	41.61
VIT_10s0071g00010.t01	Wine grape	vacuole	35.54	41.61
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	19.63	40.88
VIT_17s0000g04600.t01	Wine grape	vacuole	36.87	40.52
TraesCS2A01G260200.1	Wheat	mitochondrion, vacuole	37.14	40.46
PGSC0003DMT400056839	Potato	vacuole	32.1	38.78
TraesCS1A01G437900.1	Wheat	cytosol	19.1	38.71
CDY47729	Canola	vacuole	32.89	38.15
PGSC0003DMT400063282	Potato	extracellular, vacuole	15.65	38.06
Solyc03g114550.1.1	Tomato	vacuole	27.59	37.96
Bra008124.1-P	Field mustard	vacuole	32.63	37.85
KRH07462	Soybean	vacuole	34.75	37.75
AT1G74010.1	Thale cress	vacuole	32.36	37.54
CDY45863	Canola	vacuole	32.36	37.54
CDX96505	Canola	vacuole	32.63	37.5
CDX73037	Canola	vacuole	32.63	37.5
VIT_10s0071g00250.t01	Wine grape	vacuole	33.69	37.35
CDX73038	Canola	vacuole	31.57	36.62
KRH45407	Soybean	nucleus	33.69	36.39
KRH03206	Soybean	vacuole	32.36	36.31
CDX96506	Canola	vacuole	31.3	36.31
AT1G74000.1	Thale cress	vacuole	31.57	36.17
TraesCS5A01G131200.1	Wheat	vacuole	24.14	35.97
KRH54773	Soybean	vacuole	32.1	35.91
Solyc12g039070.1.1	Tomato	nucleus	31.57	35.74
Bra008127.1-P	Field mustard	vacuole	31.03	35.67
KRH56734	Soybean	vacuole	32.1	35.38
Bra003820.1-P	Field mustard	vacuole	30.24	35.29
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	25.73	35.02
CDX73039	Canola	vacuole	30.24	34.97
CDX96507	Canola	vacuole	30.24	34.97
Bra015943.1-P	Field mustard	vacuole	30.24	34.97
AT1G74020.1	Thale cress	vacuole	31.03	34.93
CDY45861	Canola	vacuole	30.5	34.85
TraesCS5A01G390200.1	Wheat	golgi	36.6	34.67
CDY47728	Canola	vacuole	29.97	34.56
Bra008126.1-P	Field mustard	vacuole	29.97	34.56
PGSC0003DMT400063277	Potato	vacuole	30.24	34.34
Solyc03g114560.2.1	Tomato	extracellular	29.71	34.25
PGSC0003DMT400063274	Potato	vacuole	30.5	34.23
CDY66188	Canola	vacuole	29.71	34.15
KRH63133	Soybean	peroxisome, vacuole	15.65	34.1
Solyc03g114530.2.1	Tomato	vacuole	29.97	34.04
Solyc03g114540.1.1	Tomato	vacuole	30.24	33.93
CDX68204	Canola	vacuole	29.44	33.84
CDY66189	Canola	vacuole	26.53	33.67
PGSC0003DMT400063286	Potato	vacuole	29.71	33.53
TraesCS4A01G089000.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	35.01	31.96
VIT_17s0000g04610.t01	Wine grape	vacuole	30.77	31.61
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	35.81	29.8
TraesCS2A01G170300.1	Wheat	cytosol	23.61	27.81
TraesCS1A01G203800.1	Wheat	cytosol, plastid, vacuole	17.77	27.46
TraesCS2A01G170200.1	Wheat	plasma membrane, vacuole	24.14	22.98
Bra015944.1-P	Field mustard	vacuole	30.77	19.43

Protein Annotations

EnsemblPlants:TraesCS5A01G188300.1	EnsemblPlantsGene:TraesCS5A01G188300	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF60	PFAM:PF03088	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF63829	TMHMM:TMhelix	MapMan:50.4.3	:	:	:

Description

No Description!

Coordinates

chr5A:-:389763387..389764775

Molecular Weight (calculated)

40582.5 Da

IEP (calculated)

8.213

GRAVY (calculated)

-0.038

Length

377 amino acids

Sequence
(BLAST)

001: MAYSCLPLYA ASFLVVLLVL PLMAVASAAA PAAETSYETK SMDPGLALMT LPQPVSGPES LAFDRRGGGP HAGVSDGRVF KWRGRRLGWT EFAYNFRHKQ
101: ASILCIHCTY MHVRSGHNLC TPVCVGVLCR SVGMCAPKKK LVVPESVCGR PLGLQFHHES GDLYVADAYL GLLRVPARGG LVQVVATEAG GVPFNFLNGL
201: DVDQKSGDVY FTDSSSTYRR SEYLLVVALG DETGRLLRYD PRTRRVAVLH AGLSYPNGVA VSADGSHVVV SHTALSELRR YWVRGPKAGR NETFAELPGF
301: PDNVRSDGRG GYWVALTHGG DDGVAAPTVA VRVGRDRAVE EALGGFSFET VSEVGERNGT LWVGSVDTPY AGELKRH

Best Arabidopsis Sequence Match ( AT1G08470.1 )
(BLAST)

001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP

Arabidopsis Description

SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.