Factsheet for TraesCS2A01G170200.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G177700.1	Wheat	plasma membrane, vacuole	90.15	97.28
TraesCS2B01G196500.1	Wheat	golgi, vacuole	87.63	94.55
TraesCS2A01G170300.1	Wheat	cytosol	64.9	80.31
Zm00001d006853_P001	Maize	vacuole	69.95	75.48
KXG36678	Sorghum	vacuole	69.44	74.73
KXG36676	Sorghum	vacuole	67.93	74.72
Os07t0614000-02	Rice	vacuole	66.67	71.93
GSMUA_Achr11P...	Banana	golgi, vacuole	51.26	56.55
PGSC0003DMT400005990	Potato	cytosol	36.36	49.83
KRH37504	Soybean	vacuole	43.43	48.04
VIT_11s0016g00880.t01	Wine grape	plastid	43.69	47.01
Solyc05g025810.2.1	Tomato	plasma membrane, vacuole	41.92	46.89
VIT_11s0016g00860.t01	Wine grape	golgi, vacuole	43.18	46.85
KRH37503	Soybean	vacuole	32.32	40.76
VIT_11s0016g00870.t01	Wine grape	plasma membrane, vacuole	43.43	37.31
TraesCS1A01G203800.1	Wheat	cytosol, plastid, vacuole	20.45	33.2
TraesCS7A01G138700.1	Wheat	cytosol	16.67	31.58
TraesCS7A01G138300.1	Wheat	cytosol	16.41	31.1
TraesCS3A01G298200.1	Wheat	cytosol	22.98	28.71
TraesCS1A01G437900.1	Wheat	cytosol	12.88	27.42
TraesCS5A01G390200.1	Wheat	golgi	27.53	27.39
TraesCS3A01G256600.1	Wheat	vacuole	22.98	27.08
TraesCS2A01G078000.1	Wheat	vacuole	22.98	26.53
TraesCS5A01G131200.1	Wheat	vacuole	16.67	26.09
TraesCS2A01G260200.1	Wheat	mitochondrion, vacuole	21.97	25.14
TraesCS3A01G496700.1	Wheat	golgi, vacuole	21.72	24.93
TraesCS1A01G026500.1	Wheat	vacuole	21.46	24.64
TraesCS7A01G138800.1	Wheat	golgi, vacuole	18.94	24.59
TraesCS3A01G496900.1	Wheat	vacuole	21.72	24.57
TraesCS5A01G188200.1	Wheat	vacuole	22.22	24.24
TraesCS5A01G188300.1	Wheat	extracellular, plasma membrane, vacuole	22.98	24.14
TraesCS4A01G089000.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	24.24	23.24

Protein Annotations

EnsemblPlants:TraesCS2A01G170200.1	EnsemblPlantsGene:TraesCS2A01G170200	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF35	PFAM:PF03088	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF63829	TMHMM:TMhelix	MapMan:50.4.3	:	:	:

Description

No Description!

Coordinates

chr2A:-:125251440..125253169

Molecular Weight (calculated)

42393.4 Da

IEP (calculated)

5.215

GRAVY (calculated)

0.060

Length

396 amino acids

Sequence
(BLAST)

001: MALGGLFGTA AVAVVVSLAV HVALNCPIQP LPSPRPPPPA ARYRPNNLLQ GLEKLGEGQL SAPEDVYVDA AAGGTLYTAT RDGWLQRMHP NGSWEQWRFV
101: GGTGLLGIAP SADGSVLVCD ADKGLLRVEE GRVTILASTV EGSTIRFADE AIEASDGTVY FSDASTRFGF DRWFHAYVES QPTGRLLKYD PRTGKASVAL
201: DNLSFANGVA LSRDEAFVIV CETGRFKCTR LWLKGDKTGQ AETFVGDLPG SPDNIQLAPD GSFWIALIQV TSLHLSSPTW IPYQLNHTLG CSICVQRSPW
301: LDLVMRWTFT KRVVASFPAL LDAVHATGKG AMVAQVSEDG EVLRVLDDTE GKVINFITSV TEFNGDLFFG SLATNFVGKL SLAKVAQAQG QAAASS

Best Arabidopsis Sequence Match ( AT3G51420.1 )
(BLAST)

001: MVLFFSTRFL FFSIFFPCLI SITLYQLDSF EPASLPADSL ITSPTSIPPL LNDRFLTGAE FIGVGLLNNP EDIAYHKDSN LIYTGCVDGW VKRVSVHDSA
101: NDSIVEDWVN TGGRPLGIAF GLHGEVIVAD ANKGLLSISD GGKKTELLTD EADGVRFKLT DAVTVADNGV LYFTDASSKY DFYQFIFDFL EGKPHGRVMS
201: FDPTTRATRV LLKDLYFANG ISMSPDQTHF VFCETIMRRC SKYYISEERV EVFIQGLPGY PDNIRYDGDG HYWIALISEV TTSWKLSMKY LFLRKLIYMA
301: AKYGVELLSI KNAAVLQVDL DGNPIAMYHD HPFSHITSGV KIGNHLYFGS LLHSYITRLD LLKYPAQKKL

Arabidopsis Description

SSL4SSL4 [Source:UniProtKB/TrEMBL;Acc:A0A178VDG6]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.