Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 6
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G133600.1 | Wheat | extracellular, vacuole | 97.63 | 66.04 |
| TraesCS5D01G139700.1 | Wheat | vacuole | 96.05 | 65.15 |
| HORVU5Hr1G043200.4 | Barley | vacuole | 93.68 | 63.37 |
| Os11t0142400-01 | Rice | extracellular | 18.97 | 52.75 |
| EES07950 | Sorghum | vacuole | 67.19 | 43.37 |
| KXG27696 | Sorghum | vacuole | 66.4 | 43.08 |
| Os12t0138800-01 | Rice | golgi, mitochondrion, plasma membrane, vacuole | 69.17 | 40.7 |
| Zm00001d052471_P001 | Maize | vacuole | 65.22 | 33.95 |
| VIT_08s0007g05360.t01 | Wine grape | vacuole | 43.87 | 29.37 |
| TraesCS3A01G298200.1 | Wheat | cytosol | 36.76 | 29.34 |
| TraesCS3A01G256600.1 | Wheat | vacuole | 38.74 | 29.17 |
| CDY22515 | Canola | vacuole | 39.53 | 28.65 |
| TraesCS3A01G496700.1 | Wheat | golgi, vacuole | 38.74 | 28.41 |
| TraesCS2A01G078000.1 | Wheat | vacuole | 38.34 | 28.28 |
| CDY35420 | Canola | vacuole | 38.74 | 28.0 |
| TraesCS3A01G496900.1 | Wheat | vacuole | 38.34 | 27.71 |
| Bra000222.1-P | Field mustard | cytosol | 37.55 | 27.54 |
| TraesCS1A01G026500.1 | Wheat | vacuole | 37.55 | 27.54 |
| CDY23858 | Canola | vacuole | 39.53 | 26.74 |
| TraesCS5A01G188200.1 | Wheat | vacuole | 38.34 | 26.72 |
| Bra004613.1-P | Field mustard | vacuole | 39.53 | 26.67 |
| CDX79944 | Canola | vacuole | 39.53 | 26.67 |
| KRH66810 | Soybean | vacuole | 38.34 | 25.39 |
| TraesCS7A01G138700.1 | Wheat | cytosol | 20.95 | 25.36 |
| TraesCS7A01G138300.1 | Wheat | cytosol | 20.95 | 25.36 |
| AT2G41290.1 | Thale cress | vacuole | 37.55 | 25.27 |
| TraesCS7A01G138800.1 | Wheat | golgi, vacuole | 30.04 | 24.92 |
| TraesCS5A01G390200.1 | Wheat | golgi | 39.13 | 24.87 |
| TraesCS2A01G260200.1 | Wheat | mitochondrion, vacuole | 33.99 | 24.86 |
| TraesCS5A01G188300.1 | Wheat | extracellular, plasma membrane, vacuole | 35.97 | 24.14 |
| PGSC0003DMT400048627 | Potato | cytosol, golgi, mitochondrion, vacuole | 31.23 | 23.17 |
| TraesCS4A01G089000.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, vacuole | 37.55 | 23.0 |
| TraesCS2A01G170300.1 | Wheat | cytosol | 26.48 | 20.94 |
| TraesCS1A01G437900.1 | Wheat | cytosol | 14.62 | 19.89 |
| TraesCS2A01G170200.1 | Wheat | plasma membrane, vacuole | 26.09 | 16.67 |
| TraesCS1A01G203800.1 | Wheat | cytosol, plastid, vacuole | 15.02 | 15.57 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G131200.1 | EnsemblPlantsGene:TraesCS5A01G131200 | Gene3D:2.120.10.30 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016844 | InterPro:6-blade_b-propeller_TolB-like | InterPro:IPR011042 | InterPro:Strictosidine_synth_cons-reg |
| InterPro:Strictosidine_synthase | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF22 | PFAM:PF03088 | SEG:seg | SignalP:SignalP-noTM |
| SUPFAM:SSF63829 | TMHMM:TMhelix | MapMan:50.4.3 | : | : | : |
Description
No Description!
Coordinates
chr5A:+:295586795..295589554
Molecular Weight (calculated)
27167.3 Da
IEP (calculated)
4.985
GRAVY (calculated)
-0.086
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVSCRLVAV AVALALAAAL LSSSPLHGDV REVVEIRDVE LIPVDGGAAG PESVAFGVGG EGPYAGVSDG RVIRWLPEEG RWVDHSSAAA PELLDSCRGS
101: QDPMKEHECG RPLGLKFNNK TGELYVADSY FGLRVVSPGD NVSRLIGPGQ PGSPFSFANG VEIDQETGVV YFTETSTRFH RRQFLNIVIS GDATGRLLKY
201: DPNTKEVQVL VDGLAFPNGL LMSEDGSHLL LAETTTCKIH RYWLKTPKAS TLE
101: QDPMKEHECG RPLGLKFNNK TGELYVADSY FGLRVVSPGD NVSRLIGPGQ PGSPFSFANG VEIDQETGVV YFTETSTRFH RRQFLNIVIS GDATGRLLKY
201: DPNTKEVQVL VDGLAFPNGL LMSEDGSHLL LAETTTCKIH RYWLKTPKAS TLE
001: MMKLLLVVAT SVALIFSVTD LSGEGPKHGG ESMLTVQIPD FRLIPTTGAL GPESFVFDFF GDGPYTGLSD GRIVKWLANE SRWIDFAVTT SAREGCEGPH
101: EHQRTEHVCG RPLGLAFDKS TGDLYIADAY MGLLKVGPTG GVATQVLPRE LNEALRFTNS LDINPRTGVV YFTDSSSVYQ RRNYIGAMMS GDKTGRLMKY
201: DNTKQVTTLL SNLAFVNGVA LSQNGDYLLV VETAMCRILR YWLNETSVKS QSHDNYEIFA EGLPGFPDNI KRSPRGGFWV GLNTKHSKLT KFAMSNAWLG
301: RAALGLPVDW MKVHSVWARY NGNGMAVRLS EDSGVILEVF EGKNENKWIS ISEVEEKDGT LWVGSVNTPF AGMYKI
101: EHQRTEHVCG RPLGLAFDKS TGDLYIADAY MGLLKVGPTG GVATQVLPRE LNEALRFTNS LDINPRTGVV YFTDSSSVYQ RRNYIGAMMS GDKTGRLMKY
201: DNTKQVTTLL SNLAFVNGVA LSQNGDYLLV VETAMCRILR YWLNETSVKS QSHDNYEIFA EGLPGFPDNI KRSPRGGFWV GLNTKHSKLT KFAMSNAWLG
301: RAALGLPVDW MKVHSVWARY NGNGMAVRLS EDSGVILEVF EGKNENKWIS ISEVEEKDGT LWVGSVNTPF AGMYKI
Arabidopsis Description
SSL2Protein STRICTOSIDINE SYNTHASE-LIKE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLG8]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.