Factsheet for Os12t0138800-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, golgi, vacuole

Predictor Summary:

plastid 1
vacuole 3
extracellular 1
endoplasmic reticulum 1
plasma membrane 2
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion, plasma membrane, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	mitochondrion
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0142300-00	Rice	extracellular, plasma membrane	23.95	91.96
TraesCS5A01G131200.1	Wheat	vacuole	40.7	69.17
TraesCS5B01G133600.1	Wheat	extracellular, vacuole	60.0	68.98
HORVU5Hr1G043200.4	Barley	vacuole	59.53	68.45
TraesCS5D01G139700.1	Wheat	vacuole	59.3	68.36
KXG27696	Sorghum	vacuole	58.84	64.87
EES07950	Sorghum	vacuole	59.07	64.8
Os11t0142400-01	Rice	extracellular	12.79	60.44
Zm00001d052471_P001	Maize	vacuole	55.58	49.18
VIT_08s0007g05360.t01	Wine grape	vacuole	38.6	43.92
Bra004613.1-P	Field mustard	vacuole	36.74	42.13
CDX79944	Canola	vacuole	36.74	42.13
KRH66810	Soybean	vacuole	36.74	41.36
CDY23858	Canola	vacuole	35.81	41.18
Bra000222.1-P	Field mustard	cytosol	32.79	40.87
AT2G41290.1	Thale cress	vacuole	34.88	39.89
CDY22515	Canola	vacuole	31.86	39.26
CDY35420	Canola	vacuole	31.4	38.57
PGSC0003DMT400048627	Potato	cytosol, golgi, mitochondrion, vacuole	29.53	37.24
Os08t0442200-01	Rice	extracellular	29.53	36.29
Os07t0543600-00	Rice	golgi, vacuole	29.07	35.71
Os06t0623700-01	Rice	golgi, vacuole	29.07	35.71
Os03t0750700-01	Rice	plasma membrane	32.79	35.34
Os08t0175000-00	Rice	golgi, mitochondrion, vacuole	28.6	34.55
Os01t0698200-00	Rice	mitochondrion	22.79	33.79
Os09t0374900-00	Rice	cytosol, golgi, plastid, vacuole	29.07	32.72
Os03t0263600-01	Rice	cytosol, golgi, mitochondrion, vacuole	31.63	31.85
Os10t0543500-01	Rice	plasma membrane	17.21	29.02
Os07t0614000-02	Rice	vacuole	20.7	24.25

Protein Annotations

Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	ProteinID:ABA95779.2	EMBL:AK064775	ProteinID:BAT15822.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0016020	GO:GO:0016021	GO:GO:0016705	GO:GO:0016787	GO:GO:0016788	GO:GO:0016844
GO:GO:0020037	GO:GO:0055114	InterPro:IPR011042	EnsemblPlantsGene:Os12g0138800	EnsemblPlants:Os12t0138800-01	PFAM:PF03088
PANTHER:PTHR10426	PANTHER:PTHR10426:SF22	UniProt:Q2QXZ1	SUPFAM:SSF63829	InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase
TMHMM:TMhelix	UniParc:UPI0000D89C19	SEG:seg	:	:	:

Description

Six-bladed beta-propeller, TolB-like domain containing protein. (Os12t0138800-01)

Coordinates

chr12:+:1882578..1888258

Molecular Weight (calculated)

47763.9 Da

IEP (calculated)

9.046

GRAVY (calculated)

-0.052

Length

430 amino acids

Sequence
(BLAST)

001: MIWWNIMSRS KCDKAINHIS TLHKQIRSRS RVAISLIAVT ISLIAVIHIG SGLLVPMKAR LVVLAAAVAA AALLVSLDPR SDDVPVLEIW ERDVELITVD
101: AGGAVGPESV AFDGDGDGPY TGVSDGRVLK WLPLERRWVE HSSAVIEPHM LDSCRGSKDT KREQECGRPL GLKFNSKTGE LYVADAYLGL RVVSPGENVS
201: RPLVPKWTES PFSFSNGVEI DHETGVIYFT ETSTRFQRRE FLNIVITGDN TGRLLKYDPK ENKVEVLVDG LCFPNGLAMS NDGSYLLLAE TTTGKILRYW
301: IKTPKASTIE EVVQLHGFPD NIKMSPRGGF WVGLHAKRGK IAEWSISYPW LRKVILKLPA QRIQRITSFL TGFGRQVIAL RLSEDGKTIE AMSVHGDVRK
401: LFKSISEVEE KDGNLWIGSV LSPFLGLYRI

Best Arabidopsis Sequence Match ( AT3G57030.1 )
(BLAST)

001: MTMMIITVFL TVIAAVLAIL VKNSQTGSGI FAPPEISGSR DVFPSAKVVN LTGASGPESI AFDPAGEGPY VGVSDGRILK WRGEPLGWSD FAHTSSNRQE
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL

Arabidopsis Description

SSL10Protein STRICTOSIDINE SYNTHASE-LIKE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3D9]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.