Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 6
- vacuole 6
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000222.1-P | Field mustard | cytosol | 75.53 | 82.32 |
| CDY35420 | Canola | vacuole | 76.06 | 81.71 |
| CDY22515 | Canola | vacuole | 75.8 | 81.66 |
| VIT_08s0007g05360.t01 | Wine grape | vacuole | 51.33 | 51.06 |
| KRH66810 | Soybean | vacuole | 48.4 | 47.64 |
| AT3G57030.1 | Thale cress | endoplasmic reticulum, extracellular, golgi | 45.48 | 45.72 |
| PGSC0003DMT400048627 | Potato | cytosol, golgi, mitochondrion, vacuole | 38.83 | 42.82 |
| TraesCS5D01G139700.1 | Wheat | vacuole | 39.36 | 39.68 |
| HORVU5Hr1G043200.4 | Barley | vacuole | 39.36 | 39.57 |
| TraesCS5B01G133600.1 | Wheat | extracellular, vacuole | 38.83 | 39.04 |
| KXG27696 | Sorghum | vacuole | 39.89 | 38.46 |
| EES07950 | Sorghum | vacuole | 39.89 | 38.27 |
| AT5G22020.2 | Thale cress | vacuole | 39.63 | 37.72 |
| TraesCS5A01G131200.1 | Wheat | vacuole | 25.27 | 37.55 |
| AT1G08470.1 | Thale cress | endoplasmic reticulum, vacuole | 38.03 | 36.67 |
| AT1G74010.1 | Thale cress | vacuole | 30.85 | 35.69 |
| AT3G57010.1 | Thale cress | extracellular, golgi, vacuole | 35.11 | 35.11 |
| Os12t0138800-01 | Rice | golgi, mitochondrion, plasma membrane, vacuole | 39.89 | 34.88 |
| AT3G57020.1 | Thale cress | vacuole | 34.04 | 34.59 |
| AT1G74000.1 | Thale cress | vacuole | 30.05 | 34.35 |
| AT1G74020.1 | Thale cress | vacuole | 30.59 | 34.33 |
| AT3G59530.3 | Thale cress | golgi, vacuole | 33.51 | 31.27 |
| Zm00001d052471_P001 | Maize | vacuole | 40.16 | 31.07 |
| AT2G41300.1 | Thale cress | vacuole | 32.45 | 30.96 |
| Os11t0142400-01 | Rice | extracellular | 7.45 | 30.77 |
| AT3G51440.1 | Thale cress | golgi, vacuole | 23.14 | 23.45 |
| Os11t0142300-00 | Rice | extracellular, plasma membrane | 6.91 | 23.21 |
| AT3G51420.1 | Thale cress | golgi, vacuole | 22.34 | 22.7 |
| AT3G51430.1 | Thale cress | golgi, vacuole | 22.34 | 22.64 |
| AT3G51450.1 | Thale cress | vacuole | 21.54 | 21.83 |
Protein Annotations
| Gene3D:2.120.10.30 | MapMan:50.4.3 | InterPro:6-blade_b-propeller_TolB-like | EntrezGene:818728 | ProteinID:AAC27642.1 | ProteinID:AAC78543.1 |
| ProteinID:AEC09957.1 | ArrayExpress:AT2G41290 | EnsemblPlantsGene:AT2G41290 | RefSeq:AT2G41290 | TAIR:AT2G41290 | RefSeq:AT2G41290-TAIR-G |
| EnsemblPlants:AT2G41290.1 | TAIR:AT2G41290.1 | EMBL:BT015732 | EMBL:BT020191 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005783 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016788 |
| GO:GO:0016844 | InterPro:IPR011042 | RefSeq:NP_181661.1 | PFAM:PF03088 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020090 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR10426 |
| PANTHER:PTHR10426:SF29 | UniProt:Q9SLG8 | SUPFAM:SSF63829 | Symbol:SSL2 | SignalP:SignalP-noTM | InterPro:Strictosidine_synth_cons-reg |
| InterPro:Strictosidine_synthase | UniParc:UPI00000A8321 | : | : | : | : |
Description
SSL2Protein STRICTOSIDINE SYNTHASE-LIKE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLG8]
Coordinates
chr2:-:17210428..17213179
Molecular Weight (calculated)
41477.6 Da
IEP (calculated)
6.635
GRAVY (calculated)
-0.145
Length
376 amino acids
Sequence
(BLAST)
(BLAST)
001: MMKLLLVVAT SVALIFSVTD LSGEGPKHGG ESMLTVQIPD FRLIPTTGAL GPESFVFDFF GDGPYTGLSD GRIVKWLANE SRWIDFAVTT SAREGCEGPH
101: EHQRTEHVCG RPLGLAFDKS TGDLYIADAY MGLLKVGPTG GVATQVLPRE LNEALRFTNS LDINPRTGVV YFTDSSSVYQ RRNYIGAMMS GDKTGRLMKY
201: DNTKQVTTLL SNLAFVNGVA LSQNGDYLLV VETAMCRILR YWLNETSVKS QSHDNYEIFA EGLPGFPDNI KRSPRGGFWV GLNTKHSKLT KFAMSNAWLG
301: RAALGLPVDW MKVHSVWARY NGNGMAVRLS EDSGVILEVF EGKNENKWIS ISEVEEKDGT LWVGSVNTPF AGMYKI
101: EHQRTEHVCG RPLGLAFDKS TGDLYIADAY MGLLKVGPTG GVATQVLPRE LNEALRFTNS LDINPRTGVV YFTDSSSVYQ RRNYIGAMMS GDKTGRLMKY
201: DNTKQVTTLL SNLAFVNGVA LSQNGDYLLV VETAMCRILR YWLNETSVKS QSHDNYEIFA EGLPGFPDNI KRSPRGGFWV GLNTKHSKLT KFAMSNAWLG
301: RAALGLPVDW MKVHSVWARY NGNGMAVRLS EDSGVILEVF EGKNENKWIS ISEVEEKDGT LWVGSVNTPF AGMYKI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.