Factsheet for Os11t0142300-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

nucleus 1
vacuole 5
extracellular 4
endoplasmic reticulum 3
plasma membrane 4
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	vacuole
PProwler:	secretory
TargetP:	secretory
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0142400-01	Rice	extracellular	51.79	63.74
Os12t0138800-01	Rice	golgi, mitochondrion, plasma membrane, vacuole	91.96	23.95
VIT_08s0007g05360.t01	Wine grape	vacuole	32.14	9.52
Os03t0750700-01	Rice	plasma membrane	33.04	9.27
Os01t0698200-00	Rice	mitochondrion	22.32	8.62
Os07t0543600-00	Rice	golgi, vacuole	25.89	8.29
CDY22515	Canola	vacuole	25.0	8.02
CDY35420	Canola	vacuole	25.0	8.0
KRH66810	Soybean	vacuole	26.79	7.85
CDY23858	Canola	vacuole	25.89	7.75
Bra004613.1-P	Field mustard	vacuole	25.89	7.73
CDX79944	Canola	vacuole	25.89	7.73
Os09t0374900-00	Rice	cytosol, golgi, plastid, vacuole	25.89	7.59
Os06t0623700-01	Rice	golgi, vacuole	23.21	7.43
Bra000222.1-P	Field mustard	cytosol	22.32	7.25
Os08t0442200-01	Rice	extracellular	22.32	7.14
Os03t0263600-01	Rice	cytosol, golgi, mitochondrion, vacuole	26.79	7.03
AT2G41290.1	Thale cress	vacuole	23.21	6.91
Os08t0175000-00	Rice	golgi, mitochondrion, vacuole	21.43	6.74
Os07t0614000-02	Rice	vacuole	15.18	4.63
PGSC0003DMT400048627	Potato	cytosol, golgi, mitochondrion, vacuole	4.46	1.47
Os10t0543500-01	Rice	plasma membrane	0.0	0.0

Protein Annotations

Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	UniProt:A0A0N7KSE9	ProteinID:BAT12626.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016788	GO:GO:0016844	InterPro:IPR011042	EnsemblPlantsGene:Os11g0142300	EnsemblPlants:Os11t0142300-00	PANTHER:PTHR10426
PANTHER:PTHR10426:SF22	SUPFAM:SSF63829	InterPro:Strictosidine_synthase	TMHMM:TMhelix	UniParc:UPI0003938EE9	SEG:seg

Description

Similar to cDNA clone:J013000A24, full insert sequence. (Os11t0142300-00)

Coordinates

chr11:+:1984616..1985126

Molecular Weight (calculated)

11647.1 Da

IEP (calculated)

4.245

GRAVY (calculated)

0.500

Length

112 amino acids

Sequence
(BLAST)

001: AISLIAVIHI GSGLLVPMKA SLVVLAAAVA AAAALLVSLD PRSDDVPVLE IRERDVELIT VDAGGAVGPE SVAFDGDGEG PYTGVSDGRV LKWLPLERRW
101: VEHSSAVIEP QL

Best Arabidopsis Sequence Match ( AT2G41290.1 )
(BLAST)

001: MMKLLLVVAT SVALIFSVTD LSGEGPKHGG ESMLTVQIPD FRLIPTTGAL GPESFVFDFF GDGPYTGLSD GRIVKWLANE SRWIDFAVTT SAREGCEGPH
101: EHQRTEHVCG RPLGLAFDKS TGDLYIADAY MGLLKVGPTG GVATQVLPRE LNEALRFTNS LDINPRTGVV YFTDSSSVYQ RRNYIGAMMS GDKTGRLMKY
201: DNTKQVTTLL SNLAFVNGVA LSQNGDYLLV VETAMCRILR YWLNETSVKS QSHDNYEIFA EGLPGFPDNI KRSPRGGFWV GLNTKHSKLT KFAMSNAWLG
301: RAALGLPVDW MKVHSVWARY NGNGMAVRLS EDSGVILEVF EGKNENKWIS ISEVEEKDGT LWVGSVNTPF AGMYKI

Arabidopsis Description

SSL2Protein STRICTOSIDINE SYNTHASE-LIKE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLG8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.