Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 8
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d006853_P001 | Maize | vacuole | 74.39 | 74.39 |
| KXG36678 | Sorghum | vacuole | 73.57 | 73.37 |
| TraesCS2A01G170300.1 | Wheat | cytosol | 63.49 | 72.81 |
| KXG36676 | Sorghum | vacuole | 71.12 | 72.5 |
| TraesCS2D01G177700.1 | Wheat | plasma membrane, vacuole | 71.66 | 71.66 |
| TraesCS2B01G196500.1 | Wheat | golgi, vacuole | 71.66 | 71.66 |
| TraesCS2D01G177900.2 | Wheat | golgi | 71.12 | 71.51 |
| TraesCS2B01G196600.1 | Wheat | golgi | 69.48 | 69.86 |
| TraesCS2A01G170200.1 | Wheat | plasma membrane, vacuole | 71.93 | 66.67 |
| GSMUA_Achr11P... | Banana | golgi, vacuole | 53.68 | 54.87 |
| PGSC0003DMT400005990 | Potato | cytosol | 39.24 | 49.83 |
| KRH37504 | Soybean | vacuole | 46.59 | 47.77 |
| Solyc05g025810.2.1 | Tomato | plasma membrane, vacuole | 45.23 | 46.89 |
| VIT_11s0016g00860.t01 | Wine grape | golgi, vacuole | 46.59 | 46.85 |
| VIT_11s0016g00880.t01 | Wine grape | plastid | 46.59 | 46.47 |
| KRH37503 | Soybean | vacuole | 33.79 | 39.49 |
| VIT_11s0016g00870.t01 | Wine grape | plasma membrane, vacuole | 46.87 | 37.31 |
| Os10t0543500-01 | Rice | plasma membrane | 25.89 | 37.25 |
| Os03t0750700-01 | Rice | plasma membrane | 30.25 | 27.82 |
| Os08t0442200-01 | Rice | extracellular | 25.89 | 27.14 |
| Os08t0175000-00 | Rice | golgi, mitochondrion, vacuole | 25.89 | 26.69 |
| Os06t0623700-01 | Rice | golgi, vacuole | 24.52 | 25.71 |
| Os03t0263600-01 | Rice | cytosol, golgi, mitochondrion, vacuole | 29.7 | 25.53 |
| Os01t0698200-00 | Rice | mitochondrion | 20.16 | 25.52 |
| Os07t0543600-00 | Rice | golgi, vacuole | 24.25 | 25.43 |
| Os09t0374900-00 | Rice | cytosol, golgi, plastid, vacuole | 25.61 | 24.61 |
| Os12t0138800-01 | Rice | golgi, mitochondrion, plasma membrane, vacuole | 24.25 | 20.7 |
| Os11t0142400-01 | Rice | extracellular | 4.36 | 17.58 |
| Os11t0142300-00 | Rice | extracellular, plasma membrane | 4.63 | 15.18 |
Protein Annotations
| Gene3D:2.120.10.30 | EntrezGene:4343890 | MapMan:50.4.3 | InterPro:6-blade_b-propeller_TolB-like | EMBL:AK109489 | ProteinID:BAC16494.1 |
| ProteinID:BAF22174.1 | ProteinID:BAT02631.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016788 | GO:GO:0016844 | InterPro:IPR011042 | EnsemblPlantsGene:Os07g0614000 |
| EnsemblPlants:Os07t0614000-02 | PFAM:PF03088 | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF35 | UniProt:Q8H3A4 | SUPFAM:SSF63829 |
| SignalP:SignalP-noTM | InterPro:Strictosidine_synth_cons-reg | InterPro:Strictosidine_synthase | UniParc:UPI00000AD848 | RefSeq:XP_015644553.1 | SEG:seg |
Description
Six-bladed beta-propeller, TolB-like domain containing protein. (Os07t0614000-01);Six-bladed beta-propeller, TolB-like domain containing protein. (Os07t0614000-02)
Coordinates
chr7:+:25287602..25290131
Molecular Weight (calculated)
39658.4 Da
IEP (calculated)
4.658
GRAVY (calculated)
0.105
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQQLGLLAA VFVSLAVHVA LHCPIQPLAP PPARPPAAAR FPPNNLLQNL EKLGEGMLSA PEDVYVDDAG GEVFTATRDG WVRRMQANGS WERWGLVGGT
101: GLLGVAPSAD GAMLVCDADK GLLKVDENGR VTLLASTVEG STIRFADAAI EASDGTVYFS DASTRFSFDN WFLDFFEYRF TGRLLKYDPR TGEASVVLDG
201: LGFANGVALP PDEAFVVVCE TMRFRCLRVW LKGEKAGEAE IFVDNLPGNP DNIRLGSDGH FWIALLQVRS PWLDLISRWS LTRRVIASFP ALVERTKATL
301: KGAVVAQVSL NGEIVRVLGD SEGNVINMVT SVTEFNGDLF LGSLATNFIG KLSLAKVTRE QEDAVPS
101: GLLGVAPSAD GAMLVCDADK GLLKVDENGR VTLLASTVEG STIRFADAAI EASDGTVYFS DASTRFSFDN WFLDFFEYRF TGRLLKYDPR TGEASVVLDG
201: LGFANGVALP PDEAFVVVCE TMRFRCLRVW LKGEKAGEAE IFVDNLPGNP DNIRLGSDGH FWIALLQVRS PWLDLISRWS LTRRVIASFP ALVERTKATL
301: KGAVVAQVSL NGEIVRVLGD SEGNVINMVT SVTEFNGDLF LGSLATNFIG KLSLAKVTRE QEDAVPS
001: MVLFFSTRFL FFSIFFPCLI SITLYQLDSF EPASLPADSL ITSPTSIPPL LNDRFLTGAE FIGVGLLNNP EDIAYHKDSN LIYTGCVDGW VKRVSVHDSA
101: NDSIVEDWVN TGGRPLGIAF GLHGEVIVAD ANKGLLSISD GGKKTELLTD EADGVRFKLT DAVTVADNGV LYFTDASSKY DFYQFIFDFL EGKPHGRVMS
201: FDPTTRATRV LLKDLYFANG ISMSPDQTHF VFCETIMRRC SKYYISEERV EVFIQGLPGY PDNIRYDGDG HYWIALISEV TTSWKLSMKY LFLRKLIYMA
301: AKYGVELLSI KNAAVLQVDL DGNPIAMYHD HPFSHITSGV KIGNHLYFGS LLHSYITRLD LLKYPAQKKL
101: NDSIVEDWVN TGGRPLGIAF GLHGEVIVAD ANKGLLSISD GGKKTELLTD EADGVRFKLT DAVTVADNGV LYFTDASSKY DFYQFIFDFL EGKPHGRVMS
201: FDPTTRATRV LLKDLYFANG ISMSPDQTHF VFCETIMRRC SKYYISEERV EVFIQGLPGY PDNIRYDGDG HYWIALISEV TTSWKLSMKY LFLRKLIYMA
301: AKYGVELLSI KNAAVLQVDL DGNPIAMYHD HPFSHITSGV KIGNHLYFGS LLHSYITRLD LLKYPAQKKL
Arabidopsis Description
SSL4SSL4 [Source:UniProtKB/TrEMBL;Acc:A0A178VDG6]
SUBAcon: [golgi,vacuole]
SUBAcon: [golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.