Factsheet for TraesCS2A01G170300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

vacuole 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, vacuole
MultiLoc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G177900.2	Wheat	golgi	95.94	84.11
TraesCS2B01G196600.1	Wheat	golgi	94.69	83.01
Zm00001d006853_P001	Maize	vacuole	75.0	65.4
TraesCS2A01G170200.1	Wheat	plasma membrane, vacuole	80.31	64.9
KXG36678	Sorghum	vacuole	73.12	63.59
Os07t0614000-02	Rice	vacuole	72.81	63.49
KXG36676	Sorghum	vacuole	70.94	63.06
GSMUA_Achr11P...	Banana	golgi, vacuole	60.31	53.76
PGSC0003DMT400005990	Potato	cytosol	48.44	53.63
Solyc05g025810.2.1	Tomato	plasma membrane, vacuole	52.5	47.46
KRH37504	Soybean	vacuole	52.5	46.93
VIT_11s0016g00860.t01	Wine grape	golgi, vacuole	52.81	46.3
VIT_11s0016g00880.t01	Wine grape	plastid	52.81	45.92
KRH37503	Soybean	vacuole	39.06	39.81
VIT_11s0016g00870.t01	Wine grape	plasma membrane, vacuole	53.44	37.09
TraesCS1A01G203800.1	Wheat	cytosol, plastid, vacuole	26.88	35.25
TraesCS7A01G138300.1	Wheat	cytosol	21.56	33.01
TraesCS7A01G138700.1	Wheat	cytosol	21.25	32.54
TraesCS3A01G298200.1	Wheat	cytosol	29.06	29.34
TraesCS1A01G437900.1	Wheat	cytosol	16.56	28.49
TraesCS3A01G256600.1	Wheat	vacuole	29.06	27.68
TraesCS5A01G131200.1	Wheat	vacuole	20.94	26.48
TraesCS3A01G496700.1	Wheat	golgi, vacuole	28.12	26.09
TraesCS3A01G496900.1	Wheat	vacuole	28.12	25.71
TraesCS2A01G078000.1	Wheat	vacuole	27.5	25.66
TraesCS1A01G026500.1	Wheat	vacuole	27.5	25.51
TraesCS5A01G390200.1	Wheat	golgi	31.56	25.38
TraesCS5A01G188200.1	Wheat	vacuole	28.44	25.07
TraesCS2A01G260200.1	Wheat	mitochondrion, vacuole	26.25	24.28
TraesCS5A01G188300.1	Wheat	extracellular, plasma membrane, vacuole	27.81	23.61
TraesCS7A01G138800.1	Wheat	golgi, vacuole	22.5	23.61
TraesCS4A01G089000.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	30.0	23.24

Protein Annotations

EnsemblPlants:TraesCS2A01G170300.1	EnsemblPlantsGene:TraesCS2A01G170300	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF35	PFAM:PF03088	SUPFAM:SSF63829	MapMan:50.4.3

Description

No Description!

Coordinates

chr2A:-:125457983..125459447

Molecular Weight (calculated)

34577.1 Da

IEP (calculated)

5.063

GRAVY (calculated)

-0.009

Length

320 amino acids

Sequence
(BLAST)

001: MQGLEKLGEG RLSGPEDVYI DAAAGGTLYT ATRDGWLERM QPNGSWEHWR FVGGTDLLGI APSADGSLLV CDAHKGLLKV EEGRVTILAS TVEGSTIRFA
101: DAVIEASDGT VYFSDGSTRF GFGEWFLDYL EARPTGRLLR YDPGTGKASV ALDNLAFANG VALSRDESFL VVCETAGFRC TRLWLKGDKA GQKETFVDNL
201: PGSPDNIHLA PDGSFWIALL QLRSPWMDLI TRWTLAKRVV ASIPALHEPI KATAKGAMVA QVSEDGEIIR VLDDSQGKVI HFITSVTEFD GHLFLGSLST
301: NFLGKLSLAK VPRVQAAVSS

Best Arabidopsis Sequence Match ( AT3G51420.1 )
(BLAST)

001: MVLFFSTRFL FFSIFFPCLI SITLYQLDSF EPASLPADSL ITSPTSIPPL LNDRFLTGAE FIGVGLLNNP EDIAYHKDSN LIYTGCVDGW VKRVSVHDSA
101: NDSIVEDWVN TGGRPLGIAF GLHGEVIVAD ANKGLLSISD GGKKTELLTD EADGVRFKLT DAVTVADNGV LYFTDASSKY DFYQFIFDFL EGKPHGRVMS
201: FDPTTRATRV LLKDLYFANG ISMSPDQTHF VFCETIMRRC SKYYISEERV EVFIQGLPGY PDNIRYDGDG HYWIALISEV TTSWKLSMKY LFLRKLIYMA
301: AKYGVELLSI KNAAVLQVDL DGNPIAMYHD HPFSHITSGV KIGNHLYFGS LLHSYITRLD LLKYPAQKKL

Arabidopsis Description

SSL4SSL4 [Source:UniProtKB/TrEMBL;Acc:A0A178VDG6]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.