Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 5
- plasma membrane 3
- golgi 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G202800.1 | Wheat | golgi, vacuole | 96.42 | 96.15 |
| TraesCS5B01G195400.1 | Wheat | vacuole | 95.87 | 95.6 |
| HORVU5Hr1G058940.2 | Barley | vacuole | 94.77 | 93.73 |
| Zm00001d020308_P001 | Maize | cytosol, plastid, vacuole | 31.41 | 70.81 |
| Os09t0374900-00 | Rice | cytosol, golgi, plastid, vacuole | 73.0 | 69.37 |
| EER96672 | Sorghum | vacuole | 68.04 | 67.49 |
| Zm00001d020307_P001 | Maize | endoplasmic reticulum, vacuole | 37.47 | 66.02 |
| TraesCS5A01G188300.1 | Wheat | extracellular, plasma membrane, vacuole | 54.82 | 52.79 |
| GSMUA_Achr3P06240_001 | Banana | cytosol, mitochondrion, peroxisome, vacuole | 44.63 | 52.26 |
| TraesCS3A01G298200.1 | Wheat | cytosol | 44.9 | 51.42 |
| TraesCS7A01G138300.1 | Wheat | cytosol | 29.48 | 51.2 |
| TraesCS7A01G138700.1 | Wheat | cytosol | 29.2 | 50.72 |
| TraesCS3A01G256600.1 | Wheat | vacuole | 45.45 | 49.11 |
| TraesCS3A01G496700.1 | Wheat | golgi, vacuole | 46.56 | 48.99 |
| TraesCS2A01G078000.1 | Wheat | vacuole | 46.01 | 48.69 |
| GSMUA_Achr5P05340_001 | Banana | vacuole | 47.66 | 48.19 |
| TraesCS3A01G496900.1 | Wheat | vacuole | 46.01 | 47.71 |
| TraesCS1A01G026500.1 | Wheat | vacuole | 45.18 | 47.54 |
| TraesCS1A01G437900.1 | Wheat | cytosol | 22.59 | 44.09 |
| TraesCS7A01G138800.1 | Wheat | golgi, vacuole | 36.91 | 43.93 |
| TraesCS2A01G260200.1 | Wheat | mitochondrion, vacuole | 41.6 | 43.64 |
| VIT_10s0042g00010.t01 | Wine grape | vacuole | 36.36 | 41.9 |
| VIT_00s0575g00010.t01 | Wine grape | vacuole | 35.54 | 41.35 |
| VIT_13s0074g00070.t01 | Wine grape | vacuole | 31.13 | 41.24 |
| VIT_13s0074g00080.t01 | Wine grape | vacuole | 36.09 | 40.68 |
| PGSC0003DMT400056839 | Potato | vacuole | 34.71 | 40.38 |
| VIT_10s0042g00020.t01 | Wine grape | vacuole | 35.81 | 40.37 |
| VIT_10s0042g00050.t01 | Wine grape | vacuole | 35.81 | 40.37 |
| VIT_10s0071g00020.t01 | Wine grape | vacuole | 34.16 | 40.13 |
| VIT_00s0575g00020.t01 | Wine grape | vacuole | 35.54 | 40.06 |
| VIT_10s0071g00010.t01 | Wine grape | vacuole | 35.26 | 39.75 |
| VIT_10s0071g00250.t01 | Wine grape | vacuole | 37.19 | 39.71 |
| VIT_10s0042g00030.t01 | Wine grape | vacuole | 29.75 | 39.56 |
| CDX96505 | Canola | vacuole | 34.99 | 38.72 |
| TraesCS5A01G131200.1 | Wheat | vacuole | 26.72 | 38.34 |
| VIT_17s0000g04580.t01 | Wine grape | extracellular, vacuole | 19.01 | 38.12 |
| KRH07462 | Soybean | vacuole | 36.36 | 38.04 |
| CDX73037 | Canola | vacuole | 34.16 | 37.8 |
| Solyc12g039070.1.1 | Tomato | nucleus | 34.44 | 37.54 |
| KRH45407 | Soybean | nucleus | 36.09 | 37.54 |
| VIT_17s0000g04600.t01 | Wine grape | vacuole | 35.26 | 37.32 |
| PGSC0003DMT400001736 | Potato | cytosol, peroxisome, vacuole | 28.37 | 37.18 |
| Bra008125.1-P | Field mustard | cytosol, peroxisome, vacuole | 23.97 | 37.02 |
| PGSC0003DMT400063282 | Potato | extracellular, vacuole | 15.7 | 36.77 |
| TraesCS5A01G390200.1 | Wheat | golgi | 38.57 | 35.18 |
| Solyc03g114560.2.1 | Tomato | extracellular | 31.68 | 35.17 |
| Solyc03g114550.1.1 | Tomato | vacuole | 26.45 | 35.04 |
| AT1G74010.1 | Thale cress | vacuole | 31.13 | 34.77 |
| Bra008127.1-P | Field mustard | vacuole | 31.41 | 34.76 |
| CDY47728 | Canola | vacuole | 30.85 | 34.25 |
| KRH63133 | Soybean | peroxisome, vacuole | 16.25 | 34.1 |
| Bra008126.1-P | Field mustard | vacuole | 30.58 | 33.95 |
| PGSC0003DMT400063274 | Potato | vacuole | 31.41 | 33.93 |
| KRH03206 | Soybean | vacuole | 31.41 | 33.93 |
| PGSC0003DMT400063286 | Potato | vacuole | 31.13 | 33.83 |
| CDY45861 | Canola | vacuole | 30.58 | 33.64 |
| Solyc03g114540.1.1 | Tomato | vacuole | 31.13 | 33.63 |
| KRH56734 | Soybean | vacuole | 31.68 | 33.63 |
| CDX96506 | Canola | vacuole | 30.03 | 33.54 |
| KRH54773 | Soybean | vacuole | 31.13 | 33.53 |
| Bra003820.1-P | Field mustard | vacuole | 29.75 | 33.44 |
| PGSC0003DMT400063277 | Potato | vacuole | 30.58 | 33.43 |
| Solyc03g114530.2.1 | Tomato | vacuole | 30.3 | 33.13 |
| CDX96507 | Canola | vacuole | 29.75 | 33.13 |
| Bra015943.1-P | Field mustard | vacuole | 29.75 | 33.13 |
| CDX73038 | Canola | vacuole | 29.48 | 32.92 |
| AT1G74000.1 | Thale cress | vacuole | 29.75 | 32.83 |
| CDX73039 | Canola | vacuole | 29.48 | 32.82 |
| TraesCS4A01G089000.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, vacuole | 37.19 | 32.69 |
| CDY66188 | Canola | vacuole | 29.48 | 32.62 |
| CDY47729 | Canola | vacuole | 29.2 | 32.62 |
| AT1G74020.1 | Thale cress | vacuole | 30.03 | 32.54 |
| CDX68204 | Canola | vacuole | 29.2 | 32.32 |
| Bra008124.1-P | Field mustard | vacuole | 28.93 | 32.31 |
| CDY45863 | Canola | vacuole | 28.65 | 32.0 |
| VIT_17s0000g04610.t01 | Wine grape | vacuole | 32.23 | 31.88 |
| CDY66189 | Canola | vacuole | 25.62 | 31.31 |
| TraesCS1A01G203800.1 | Wheat | cytosol, plastid, vacuole | 19.28 | 28.69 |
| VIT_17s0000g04590.t01 | Wine grape | endoplasmic reticulum, peroxisome, vacuole | 35.54 | 28.48 |
| TraesCS2A01G170300.1 | Wheat | cytosol | 25.07 | 28.44 |
| TraesCS2A01G170200.1 | Wheat | plasma membrane, vacuole | 24.24 | 22.22 |
| Bra015944.1-P | Field mustard | vacuole | 29.48 | 17.92 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G188200.1 | EnsemblPlantsGene:TraesCS5A01G188200 | Gene3D:2.120.10.30 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016844 | InterPro:6-blade_b-propeller_TolB-like | InterPro:IPR011042 | InterPro:Strictosidine_synth_cons-reg |
| InterPro:Strictosidine_synthase | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF31 | PFAM:PF03088 | SEG:seg | SignalP:SignalP-noTM |
| SUPFAM:SSF63829 | TMHMM:TMhelix | MapMan:50.4.3 | : | : | : |
Description
No Description!
Coordinates
chr5A:-:389724326..389726704
Molecular Weight (calculated)
39203.7 Da
IEP (calculated)
7.869
GRAVY (calculated)
-0.133
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MDMEEARHCR SATLLMSFLS LAFLIWPPPM AAATQEMKSI YAGSRVIPVR LARPAFGPES IVFDHRGGGP YTGVSNGRVV RWRGNRRHRG WTEFAHNYKH
101: KTVAECAARK KVVEPESACG RPLGLQFHHA SGDMYIADAY LGLMRVGRCG GLAEVVATEA DGLPFNFLNG VDVDQETGDV YFTDSSTVYQ RSEYMLVVLT
201: GDATGRLMRY DPRTGNVTVL RSGLAFPNGV AVSADGTHLV VAETSSCRLL RHWLRGPAAG VTEVLADLPG YPDNVRPDGG GRGGYWVGMN RDKQWAESGT
301: TANSMSAVRV VVATNGTVVE ALRGFGDATV SEVVERNGSL WIGSVDTPYV GLFKLASLPQ CGG
101: KTVAECAARK KVVEPESACG RPLGLQFHHA SGDMYIADAY LGLMRVGRCG GLAEVVATEA DGLPFNFLNG VDVDQETGDV YFTDSSTVYQ RSEYMLVVLT
201: GDATGRLMRY DPRTGNVTVL RSGLAFPNGV AVSADGTHLV VAETSSCRLL RHWLRGPAAG VTEVLADLPG YPDNVRPDGG GRGGYWVGMN RDKQWAESGT
301: TANSMSAVRV VVATNGTVVE ALRGFGDATV SEVVERNGSL WIGSVDTPYV GLFKLASLPQ CGG
001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP
Arabidopsis Description
SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.