Factsheet for VIT_17s0000g04600.t01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 3
extracellular 4
endoplasmic reticulum 4
vacuole 7
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	31.49	59.67
PGSC0003DMT400063282	Potato	extracellular, vacuole	25.66	56.77
PGSC0003DMT400056839	Potato	vacuole	47.23	51.92
PGSC0003DMT400063286	Potato	vacuole	47.23	48.5
PGSC0003DMT400063277	Potato	vacuole	46.94	48.49
Solyc03g114560.2.1	Tomato	extracellular	46.06	48.32
Solyc03g114530.2.1	Tomato	vacuole	46.65	48.19
Solyc03g114540.1.1	Tomato	vacuole	46.65	47.62
Solyc12g039070.1.1	Tomato	nucleus	46.06	47.45
Solyc03g114550.1.1	Tomato	vacuole	37.9	47.45
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	38.19	47.29
PGSC0003DMT400063274	Potato	vacuole	46.06	47.02
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	32.07	46.81
AT1G74010.1	Thale cress	vacuole	44.02	46.46
CDX73037	Canola	vacuole	44.02	46.04
VIT_13s0074g00070.t01	Wine grape	vacuole	36.44	45.62
CDY45861	Canola	vacuole	43.44	45.15
Bra008127.1-P	Field mustard	vacuole	43.15	45.12
CDX96505	Canola	vacuole	43.15	45.12
CDY47729	Canola	vacuole	42.57	44.92
CDX73039	Canola	vacuole	42.57	44.79
VIT_10s0042g00010.t01	Wine grape	vacuole	41.11	44.76
Bra008126.1-P	Field mustard	vacuole	42.57	44.65
Bra008124.1-P	Field mustard	vacuole	42.27	44.62
CDY45863	Canola	vacuole	42.27	44.62
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	40.23	44.52
Bra015943.1-P	Field mustard	vacuole	42.27	44.48
CDX96507	Canola	vacuole	42.27	44.48
AT1G74000.1	Thale cress	vacuole	42.57	44.38
CDY47728	Canola	vacuole	42.27	44.34
VIT_10s0042g00030.t01	Wine grape	vacuole	35.28	44.32
AT1G74020.1	Thale cress	vacuole	42.86	43.88
VIT_00s0575g00010.t01	Wine grape	vacuole	39.65	43.59
VIT_10s0042g00020.t01	Wine grape	vacuole	40.82	43.48
VIT_10s0071g00020.t01	Wine grape	vacuole	39.07	43.37
VIT_10s0042g00050.t01	Wine grape	vacuole	40.52	43.17
VIT_13s0074g00080.t01	Wine grape	vacuole	40.23	42.86
Zm00001d029115_P001	Maize	extracellular, vacuole	29.15	42.73
Bra003820.1-P	Field mustard	vacuole	40.23	42.72
HORVU3Hr1G065520.3	Barley	extracellular	39.94	42.55
VIT_10s0071g00010.t01	Wine grape	vacuole	39.94	42.55
CDX96506	Canola	vacuole	40.23	42.46
VIT_00s0575g00020.t01	Wine grape	vacuole	39.65	42.24
CDY66188	Canola	vacuole	40.23	42.07
HORVU2Hr1G013460.2	Barley	golgi, mitochondrion, vacuole	35.57	41.92
CDX73038	Canola	vacuole	39.65	41.85
CDX68204	Canola	vacuole	39.94	41.77
Os01t0698200-00	Rice	mitochondrion	34.99	41.38
CDY66189	Canola	vacuole	35.57	41.08
TraesCS3B01G289800.1	Wheat	vacuole	40.23	41.07
VIT_10s0071g00250.t01	Wine grape	vacuole	40.52	40.88
TraesCS5B01G382800.1	Wheat	vacuole	40.52	40.76
TraesCS5B01G195300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	41.11	40.75
TraesCS5D01G202700.1	Wheat	vacuole	41.11	40.75
TraesCS5B01G383000.1	Wheat	vacuole	40.23	40.71
TraesCS2A01G078000.1	Wheat	vacuole	40.52	40.52
TraesCS2B01G093000.1	Wheat	golgi, vacuole	40.52	40.52
TraesCS2D01G076200.1	Wheat	vacuole	40.52	40.52
TraesCS3A01G256600.1	Wheat	vacuole	39.65	40.48
HORVU5Hr1G058910.2	Barley	endoplasmic reticulum, extracellular, vacuole	40.82	40.46
TraesCS2D01G076400.1	Wheat	vacuole	40.23	40.23
TraesCSU01G189700.1	Wheat	vacuole	40.23	40.23
Zm00001d020306_P001	Maize	endoplasmic reticulum, vacuole	40.23	40.23
OQU75879	Sorghum	vacuole	35.86	40.2
HORVU5Hr1G093840.1	Barley	vacuole	39.65	40.12
Zm00001d029117_P001	Maize	vacuole	39.36	39.94
KXG39404	Sorghum	golgi, vacuole	39.65	39.88
TraesCS2D01G076000.1	Wheat	golgi, vacuole	39.65	39.65
Zm00001d029111_P001	Maize	vacuole	39.07	39.65
TraesCS2B01G092900.1	Wheat	golgi, vacuole	39.36	39.47
OQU79673	Sorghum	vacuole	39.07	39.18
EER96671	Sorghum	endoplasmic reticulum, golgi	39.94	39.14
HORVU2Hr1G012970.2	Barley	mitochondrion	39.94	39.14
EES01763	Sorghum	vacuole	39.36	39.13
HORVU6Hr1G026020.1	Barley	cytosol	28.28	39.11
VIT_17s0000g04610.t01	Wine grape	vacuole	41.69	38.96
EES01841	Sorghum	vacuole	39.36	38.9
VIT_06s0009g00850.t01	Wine grape	cytosol	39.65	38.75
TraesCS2D01G076300.1	Wheat	vacuole	39.07	38.73
Zm00001d012249_P001	Maize	vacuole	38.78	38.55
Zm00001d012252_P001	Maize	vacuole	38.78	38.55
Zm00001d029108_P001	Maize	vacuole	35.57	38.49
GSMUA_Achr5P05340_001	Banana	vacuole	40.23	38.44
TraesCS3D01G256900.1	Wheat	mitochondrion, plastid	39.94	38.38
Zm00001d012363_P001	Maize	endoplasmic reticulum, extracellular	16.33	38.36
TraesCS5D01G389100.1	Wheat	plastid, vacuole	39.65	38.31
Os08t0442200-01	Rice	extracellular	38.78	38.0
Zm00001d012366_P001	Maize	vacuole	38.19	37.97
Zm00001d012368_P001	Maize	golgi, vacuole	38.19	37.97
Zm00001d012371_P001	Maize	golgi, vacuole	38.19	37.97
Zm00001d012377_P001	Maize	vacuole	38.19	37.97
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	49.85	37.75
HORVU7Hr1G028550.2	Barley	plastid	19.53	37.64
Os08t0175000-00	Rice	golgi, mitochondrion, vacuole	39.07	37.64
OQU87434	Sorghum	golgi, vacuole	38.78	37.57
VIT_08s0007g05360.t01	Wine grape	vacuole	41.11	37.3
EES17427	Sorghum	golgi, vacuole	37.03	37.03
Zm00001d012375_P001	Maize	vacuole	36.15	37.01
EER90208	Sorghum	vacuole	37.32	36.99
EES07680	Sorghum	golgi, vacuole	37.32	36.99
EES05427	Sorghum	vacuole	37.03	36.92
TraesCS5A01G188300.1	Wheat	extracellular, plasma membrane, vacuole	40.52	36.87
EES05895	Sorghum	golgi, vacuole	37.03	36.71
OQU85880	Sorghum	golgi, vacuole	36.73	36.42
TraesCS2B01G281700.1	Wheat	golgi, vacuole	36.15	36.05
VIT_08s0007g05370.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	38.78	35.95
Zm00001d020307_P001	Maize	endoplasmic reticulum, vacuole	21.57	35.92
Os07t0543600-00	Rice	golgi, vacuole	36.44	35.71
TraesCS3A01G298200.1	Wheat	cytosol	32.94	35.65
OQU76676	Sorghum	extracellular, golgi, vacuole	35.86	35.55
TraesCS5B01G195400.1	Wheat	vacuole	37.61	35.44
TraesCS3D01G503900.1	Wheat	nucleus	32.07	35.37
TraesCS3B01G559000.1	Wheat	cytosol	19.24	35.29
TraesCS5A01G188200.1	Wheat	vacuole	37.32	35.26
EER96672	Sorghum	vacuole	37.61	35.25
TraesCS7B01G040900.1	Wheat	golgi, vacuole	35.57	35.06
TraesCS7D01G139900.1	Wheat	vacuole	35.57	35.06
TraesCS7A01G138300.1	Wheat	cytosol	21.28	34.93
TraesCS7A01G138700.1	Wheat	cytosol	21.28	34.93
TraesCS7D01G076300.1	Wheat	vacuole	36.73	34.9
Os06t0623700-01	Rice	golgi, vacuole	35.57	34.86
TraesCS3B01G559100.1	Wheat	vacuole	34.99	34.78
TraesCS3D01G504000.1	Wheat	vacuole	34.99	34.78
Zm00001d020308_P001	Maize	cytosol, plastid, vacuole	16.33	34.78
TraesCS7B01G040400.1	Wheat	golgi, vacuole	35.28	34.77
EES17425	Sorghum	extracellular	26.53	34.73
HORVU2Hr1G064060.1	Barley	mitochondrion, vacuole	25.66	34.65
TraesCS5D01G202800.1	Wheat	golgi, vacuole	36.73	34.62
HORVU5Hr1G058940.2	Barley	vacuole	37.03	34.6
TraesCS1A01G026500.1	Wheat	vacuole	34.69	34.49
TraesCS3A01G496700.1	Wheat	golgi, vacuole	34.69	34.49
TraesCS7D01G075900.1	Wheat	vacuole	34.69	34.49
TraesCS7D01G140000.1	Wheat	golgi, vacuole	34.99	34.48
HORVU3Hr1G109810.1	Barley	golgi, vacuole	34.99	34.38
TraesCS3D01G303900.1	Wheat	cytosol	32.07	34.38
TraesCSU01G223800.1	Wheat	vacuole	34.4	34.2
TraesCSU01G104000.1	Wheat	golgi, vacuole	34.69	34.2
TraesCS7D01G076000.1	Wheat	vacuole	33.82	34.02
HORVU7Hr1G028580.1	Barley	golgi, vacuole	34.69	33.81
TraesCS3A01G496900.1	Wheat	vacuole	34.4	33.71
TraesCS7D01G140500.1	Wheat	golgi, vacuole	33.82	33.62
TraesCS3B01G338500.1	Wheat	extracellular, golgi, vacuole	33.53	33.53
TraesCS5B01G330900.1	Wheat	extracellular, vacuole	18.08	33.51
Os09t0374900-00	Rice	cytosol, golgi, plastid, vacuole	37.32	33.51
TraesCS3B01G558800.1	Wheat	cytosol	20.41	33.49
HORVU5Hr1G091230.1	Barley	golgi, mitochondrion, plastid, vacuole	34.69	33.43
TraesCSU01G240600.1	Wheat	cytosol	18.37	33.33
TraesCSU01G255900.1	Wheat	cytosol	18.37	33.33
TraesCS7A01G138800.1	Wheat	golgi, vacuole	28.86	32.46
HORVU5Hr1G078340.1	Barley	golgi, vacuole	23.03	32.38
TraesCS2A01G260200.1	Wheat	mitochondrion, vacuole	32.36	32.08
TraesCS7D01G076600.1	Wheat	cytosol	19.53	32.06
TraesCS7D01G076500.1	Wheat	cytosol	17.49	31.58
TraesCS7D01G140600.1	Wheat	endoplasmic reticulum, plasma membrane	27.99	31.27
TraesCS1A01G437900.1	Wheat	cytosol	16.91	31.18
HORVU3Hr1G074780.3	Barley	cytosol, vacuole	32.65	29.95
VIT_05s0102g00880.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	33.82	28.57
HORVU5Hr1G009400.2	Barley	cytosol, mitochondrion, plastid, vacuole	11.08	27.94
VIT_04s0210g00060.t01	Wine grape	cytosol, mitochondrion	21.28	27.14
HORVU4Hr1G016850.1	Barley	cytosol	12.54	24.71
VIT_04s0210g00130.t01	Wine grape	plasma membrane, vacuole	20.12	24.13
VIT_04s0210g00090.t01	Wine grape	mitochondrion, vacuole	13.7	23.98
Bra015944.1-P	Field mustard	vacuole	40.23	23.12
VIT_04s0210g00080.t01	Wine grape	vacuole	24.49	22.16
Zm00001d012373_P001	Maize	vacuole	37.9	22.11
VIT_04s0210g00120.t01	Wine grape	vacuole	24.2	21.9
VIT_11s0016g00860.t01	Wine grape	golgi, vacuole	23.03	21.64
VIT_11s0016g00880.t01	Wine grape	plastid	23.03	21.47
VIT_04s0210g00050.t01	Wine grape	plastid	23.91	19.66
VIT_04s0210g00100.t01	Wine grape	cytosol	9.33	18.29
VIT_04s0210g00040.t01	Wine grape	cytosol, peroxisome, vacuole	19.53	17.87
VIT_11s0016g00870.t01	Wine grape	plasma membrane, vacuole	23.91	17.79
VIT_04s0210g00030.t01	Wine grape	vacuole	24.2	10.74

Protein Annotations

EntrezGene:100259372	wikigene:100259372	Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	EMBL:AM427134
ProteinID:CAN77943	ProteinID:CAN77943.1	ProteinID:CCB43170	ProteinID:CCB43170.1	UniProt:F6GTG1	EMBL:FN594950
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016020	GO:GO:0016787
GO:GO:0016788	GO:GO:0016844	InterPro:IPR011042	EntrezGene:LOC100259372	wikigene:LOC100259372	PFAM:PF03088
PANTHER:PTHR10426	PANTHER:PTHR10426:SF59	SUPFAM:SSF63829	InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	TIGR:TC68889
TMHMM:TMhelix	UniParc:UPI000210AC1A	ArrayExpress:VIT_17s0000g04600	EnsemblPlantsGene:VIT_17s0000g04600	EnsemblPlants:VIT_17s0000g04600.t01	RefSeq:XP_002274134
RefSeq:XP_002274134.2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr17:+:4820279..4821543

Molecular Weight (calculated)

36703.5 Da

IEP (calculated)

5.379

GRAVY (calculated)

0.022

Length

343 amino acids

Sequence
(BLAST)

001: MSIEIFVNPT STVAMISIFL LLFFSVPHTV LTLSFFTQLQ LPPNVTGPEA LAFDRLGGGP YTGVSDGRVL KYGGPSAGFT DFAYTTPTRS KAVCDGTTDP
101: NSGPTCGRPL GVGFNNLTGQ LYIADAYSGL LVVGSNGGLA TPVATTAEGV PFRFLNGLDV DQLTGNVYFT DASSVYELRD ITQGVENNDA SGRLLKYDPS
201: TKQVTVLIRG LSGPAGAAVS RDGSFVLVSE FIANRTQKFW LRGPKANTSE LFFTFQGRPD NIKTSITDTF WVAVNIGKSV PTTVPTGQRM DAHGNVLQTV
301: NFEAEYGSTM ISEVQGRGEI FLYVGSRDAS YVGVYTLKDV LKK

Best Arabidopsis Sequence Match ( AT1G74010.1 )
(BLAST)

001: MASFVFVISL LLLSFSSAVF SDDASFQKLP VPDKRSGPES FAFDSTGGFY TGVSGGKILK YVPGKGYVDF AQITDSSNSA WCNGALGTAF AGKCGRPAGI
101: ALNSKTGDLY VADAPLGLHV ISPAGGLATK LADSVDGKPF KFLDGLDVDP TTGVVYFTSF SSKFGPREVL IAVGLKDASG KLFKYDPATK AVTELMEGLS
201: GAAGCAVSSD GSFVLVSEFI KSNIKKYWIK GPKAGTIEDF SSLVSNPDNI RRVGSTGNFW VASVVNKVVM PTDPRAVKLD ANGKVLQTIF LKNEFGNTLL
301: SEVNEFNGHL YIGTLTGPFA GVMKL

Arabidopsis Description

At1g74010 [Source:UniProtKB/TrEMBL;Acc:Q9C9C2]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.