Factsheet for TraesCS3B01G289800.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G256600.1	Wheat	vacuole	96.43	96.43
HORVU3Hr1G065520.3	Barley	extracellular	88.99	92.86
TraesCS3D01G256900.1	Wheat	mitochondrion, plastid	96.73	91.04
TraesCS5B01G383000.1	Wheat	vacuole	91.37	90.56
TraesCS5B01G382800.1	Wheat	vacuole	90.77	89.44
Zm00001d029115_P001	Maize	extracellular, vacuole	56.55	81.2
Os01t0698200-00	Rice	mitochondrion	65.18	75.52
Zm00001d029117_P001	Maize	vacuole	75.6	75.15
Zm00001d029111_P001	Maize	vacuole	75.6	75.15
Zm00001d029108_P001	Maize	vacuole	70.83	75.08
KXG39404	Sorghum	golgi, vacuole	74.4	73.31
OQU75879	Sorghum	vacuole	65.77	72.22
TraesCS2B01G092900.1	Wheat	golgi, vacuole	72.92	71.64
TraesCS2B01G093000.1	Wheat	golgi, vacuole	72.92	71.43
TraesCS3B01G558800.1	Wheat	cytosol	33.93	54.55
TraesCS3B01G559000.1	Wheat	cytosol	29.46	52.94
TraesCS3B01G559100.1	Wheat	vacuole	52.08	50.72
TraesCS5B01G195300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	51.49	50.0
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	45.24	49.03
TraesCS3B01G338500.1	Wheat	extracellular, golgi, vacuole	50.0	48.98
TraesCS7B01G040900.1	Wheat	golgi, vacuole	50.6	48.85
TraesCS7B01G040400.1	Wheat	golgi, vacuole	50.0	48.28
TraesCS2B01G281700.1	Wheat	golgi, vacuole	49.4	48.26
TraesCS5B01G330900.1	Wheat	extracellular, vacuole	26.19	47.57
VIT_10s0042g00010.t01	Wine grape	vacuole	44.35	47.3
VIT_00s0575g00010.t01	Wine grape	vacuole	43.15	46.47
VIT_10s0042g00020.t01	Wine grape	vacuole	44.35	46.27
VIT_13s0074g00070.t01	Wine grape	vacuole	37.5	45.99
GSMUA_Achr5P05340_001	Banana	vacuole	49.11	45.96
VIT_10s0071g00020.t01	Wine grape	vacuole	41.96	45.63
VIT_13s0074g00080.t01	Wine grape	vacuole	43.15	45.03
VIT_00s0575g00020.t01	Wine grape	vacuole	43.15	45.03
VIT_10s0042g00050.t01	Wine grape	vacuole	43.15	45.03
VIT_10s0071g00010.t01	Wine grape	vacuole	42.56	44.41
TraesCS5B01G195400.1	Wheat	vacuole	47.92	44.23
VIT_10s0042g00030.t01	Wine grape	vacuole	35.12	43.22
VIT_17s0000g04600.t01	Wine grape	vacuole	41.07	40.23
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	27.38	39.15
VIT_10s0071g00250.t01	Wine grape	vacuole	39.58	39.12
KRH07462	Soybean	vacuole	39.88	38.62
AT1G74010.1	Thale cress	vacuole	36.9	38.15
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	20.54	38.12
KRH45407	Soybean	nucleus	39.29	37.82
Bra003820.1-P	Field mustard	vacuole	36.31	37.77
Bra008127.1-P	Field mustard	vacuole	35.71	36.59
PGSC0003DMT400056839	Potato	vacuole	33.93	36.54
Solyc03g114550.1.1	Tomato	vacuole	29.76	36.5
Solyc03g114560.2.1	Tomato	extracellular	35.42	36.39
TraesCS5B01G395100.1	Wheat	vacuole	43.15	36.34
CDX73037	Canola	vacuole	35.42	36.28
CDY47728	Canola	vacuole	35.12	36.09
Bra008126.1-P	Field mustard	vacuole	35.12	36.09
CDY45861	Canola	vacuole	35.42	36.06
CDY66189	Canola	vacuole	31.85	36.03
PGSC0003DMT400063274	Potato	vacuole	36.01	36.01
PGSC0003DMT400063286	Potato	vacuole	35.71	35.93
Solyc03g114540.1.1	Tomato	vacuole	35.71	35.71
CDY47729	Canola	vacuole	34.52	35.69
CDX96506	Canola	vacuole	34.52	35.69
CDX68204	Canola	vacuole	34.82	35.67
CDY66188	Canola	vacuole	34.82	35.67
PGSC0003DMT400063282	Potato	extracellular, vacuole	16.37	35.48
CDX73038	Canola	vacuole	34.23	35.38
CDY45863	Canola	vacuole	34.23	35.38
Bra008124.1-P	Field mustard	vacuole	34.23	35.38
PGSC0003DMT400063277	Potato	vacuole	34.82	35.24
CDX96505	Canola	vacuole	34.23	35.06
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	28.87	35.02
KRH03206	Soybean	vacuole	34.82	34.82
KRH54773	Soybean	vacuole	34.82	34.72
Solyc03g114530.2.1	Tomato	vacuole	34.23	34.64
AT1G74020.1	Thale cress	vacuole	34.52	34.63
KRH56734	Soybean	vacuole	34.82	34.21
CDX96507	Canola	vacuole	33.04	34.05
Bra015943.1-P	Field mustard	vacuole	33.04	34.05
Solyc12g039070.1.1	Tomato	nucleus	33.63	33.93
TraesCS4B01G215300.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	41.67	33.9
CDX73039	Canola	vacuole	32.74	33.74
AT1G74000.1	Thale cress	vacuole	33.04	33.74
TraesCS5B01G133600.1	Wheat	extracellular, vacuole	36.9	33.16
VIT_17s0000g04610.t01	Wine grape	vacuole	34.82	31.88
KRH63133	Soybean	peroxisome, vacuole	16.37	31.79
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	39.88	29.58
TraesCS1B01G217600.1	Wheat	extracellular, golgi, vacuole	29.76	27.25
TraesCS2B01G196600.1	Wheat	golgi	27.98	25.75
TraesCS2B01G196500.1	Wheat	golgi, vacuole	27.68	25.34
Bra015944.1-P	Field mustard	vacuole	33.33	18.76

Protein Annotations

EnsemblPlants:TraesCS3B01G289800.1	EnsemblPlantsGene:TraesCS3B01G289800	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF56	PFAM:PF03088	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF63829	MapMan:50.4.3	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:465068609..465069793

Molecular Weight (calculated)

36401.3 Da

IEP (calculated)

6.678

GRAVY (calculated)

-0.134

Length

336 amino acids

Sequence
(BLAST)

001: MGRNLAAVLV VLACLVSLAS AQQVKTTDTR WSYRLPLPDG VSGAESLAFA GKDGVYTGVS DGRVLRWGGS AAGWSTFAYN ANYRKIPLCS DSGVPSEEKE
101: SICGRPLGVR FNRKTGELYI ADAYLGLMKV GPEGGEAQVL ATEADGVRFH FLNGLDVDQA TGDVYFTDSS ANYPRRFNTE IIMNADATGR LLKYDARTKL
201: VTVLKVDLPY PNGVALSRDR THLVVAHTVP CQAFRYWLKG PKAGQYELFA DLPGYPDNVR RDGHGGFWVA LNQEKARLNA TEAPVKHLVG VRLGADGVEV
301: EELTAARGVT LSEVAEQNGN KLWLGSVELD YIGVLV

Best Arabidopsis Sequence Match ( AT1G08470.1 )
(BLAST)

001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP

Arabidopsis Description

SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.