Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G131200.1 | Wheat | vacuole | 66.04 | 97.63 |
| TraesCS5D01G139700.1 | Wheat | vacuole | 97.06 | 97.32 |
| HORVU5Hr1G043200.4 | Barley | vacuole | 95.19 | 95.19 |
| EES07950 | Sorghum | vacuole | 65.78 | 62.76 |
| KXG27696 | Sorghum | vacuole | 65.24 | 62.56 |
| Os12t0138800-01 | Rice | golgi, mitochondrion, plasma membrane, vacuole | 68.98 | 60.0 |
| Os11t0142400-01 | Rice | extracellular | 13.1 | 53.85 |
| Zm00001d052471_P001 | Maize | vacuole | 63.9 | 49.18 |
| VIT_08s0007g05360.t01 | Wine grape | vacuole | 43.32 | 42.86 |
| Bra000222.1-P | Field mustard | cytosol | 37.7 | 40.87 |
| CDX79944 | Canola | vacuole | 40.37 | 40.27 |
| CDY23858 | Canola | vacuole | 40.11 | 40.11 |
| Bra004613.1-P | Field mustard | vacuole | 40.11 | 40.0 |
| CDY22515 | Canola | vacuole | 37.17 | 39.83 |
| KRH66810 | Soybean | vacuole | 40.11 | 39.27 |
| CDY35420 | Canola | vacuole | 36.36 | 38.86 |
| AT2G41290.1 | Thale cress | vacuole | 39.04 | 38.83 |
| TraesCS2B01G281700.1 | Wheat | golgi, vacuole | 34.22 | 37.21 |
| TraesCS3B01G338500.1 | Wheat | extracellular, golgi, vacuole | 33.96 | 37.03 |
| TraesCS3B01G289800.1 | Wheat | vacuole | 33.16 | 36.9 |
| TraesCS3B01G558800.1 | Wheat | cytosol | 20.59 | 36.84 |
| TraesCS5B01G383000.1 | Wheat | vacuole | 33.16 | 36.58 |
| TraesCS2B01G093000.1 | Wheat | golgi, vacuole | 33.42 | 36.44 |
| TraesCS3B01G559000.1 | Wheat | cytosol | 18.18 | 36.36 |
| TraesCS5B01G195300.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 33.42 | 36.13 |
| TraesCS5B01G382800.1 | Wheat | vacuole | 32.89 | 36.07 |
| TraesCS7B01G040900.1 | Wheat | golgi, vacuole | 33.42 | 35.92 |
| TraesCS7B01G040400.1 | Wheat | golgi, vacuole | 33.42 | 35.92 |
| TraesCS2B01G092900.1 | Wheat | golgi, vacuole | 32.62 | 35.67 |
| PGSC0003DMT400048627 | Potato | cytosol, golgi, mitochondrion, vacuole | 32.35 | 35.48 |
| TraesCS5B01G195400.1 | Wheat | vacuole | 34.49 | 35.44 |
| TraesCS3B01G559100.1 | Wheat | vacuole | 32.62 | 35.36 |
| TraesCS5B01G330900.1 | Wheat | extracellular, vacuole | 16.84 | 34.05 |
| TraesCS5B01G395100.1 | Wheat | vacuole | 36.1 | 33.83 |
| TraesCS4B01G215300.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, vacuole | 34.76 | 31.48 |
| TraesCS2B01G196500.1 | Wheat | golgi, vacuole | 25.13 | 25.61 |
| TraesCS2B01G196600.1 | Wheat | golgi | 24.6 | 25.21 |
| TraesCS1B01G217600.1 | Wheat | extracellular, golgi, vacuole | 23.26 | 23.71 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G133600.1 | EnsemblPlantsGene:TraesCS5B01G133600 | Gene3D:2.120.10.30 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016844 | InterPro:6-blade_b-propeller_TolB-like | InterPro:IPR011042 | InterPro:Strictosidine_synth_cons-reg |
| InterPro:Strictosidine_synthase | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF22 | PFAM:PF03088 | SEG:seg | SignalP:SignalP-noTM |
| SUPFAM:SSF63829 | MapMan:50.4.3 | : | : | : | : |
Description
No Description!
Coordinates
chr5B:-:249712187..249714543
Molecular Weight (calculated)
40869.2 Da
IEP (calculated)
6.602
GRAVY (calculated)
-0.031
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MMTISCRLVA VAVALALAAA LLSSSPLRGD VRAVVEIRDV ELIPVDGGAA GPESVAFGVG GEGPYAGVSD GRVIRWLPDE GRWVEHSSAA APELLDSCRG
101: SQDPMKEHEC GRPLGLKFNN KTGELYVADS YFGLRVVSPG DNVSRLIGPG QPGSPFSFAN GVEIDQETGV VYFTETSTRF HRRQFLNIVI SGDATGRLLK
201: YDPNTNEVQV LVDGLAFPNG LLMSEDGSHL LLAETTTCKI HRYWLKTPKA STLEELVQLL GFPDNIKASP RGGFWVGLHG KRGKIAEWST SFPWLRRLVM
301: KLPPQRVQRV IAFLSRFGSQ VIALRVSEEG KVLEEVIVHD TARKMFGSIS ELEERDGCLW IGSVHLPFLG HYCL
101: SQDPMKEHEC GRPLGLKFNN KTGELYVADS YFGLRVVSPG DNVSRLIGPG QPGSPFSFAN GVEIDQETGV VYFTETSTRF HRRQFLNIVI SGDATGRLLK
201: YDPNTNEVQV LVDGLAFPNG LLMSEDGSHL LLAETTTCKI HRYWLKTPKA STLEELVQLL GFPDNIKASP RGGFWVGLHG KRGKIAEWST SFPWLRRLVM
301: KLPPQRVQRV IAFLSRFGSQ VIALRVSEEG KVLEEVIVHD TARKMFGSIS ELEERDGCLW IGSVHLPFLG HYCL
001: MTMMIITVFL TVIAAVLAIL VKNSQTGSGI FAPPEISGSR DVFPSAKVVN LTGASGPESI AFDPAGEGPY VGVSDGRILK WRGEPLGWSD FAHTSSNRQE
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL
Arabidopsis Description
SSL10Protein STRICTOSIDINE SYNTHASE-LIKE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3D9]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.