Factsheet for TraesCS2B01G281700.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G064060.1	Barley	mitochondrion, vacuole	65.41	88.58
TraesCS7B01G040900.1	Wheat	golgi, vacuole	84.3	83.33
TraesCS7B01G040400.1	Wheat	golgi, vacuole	84.3	83.33
TraesCS2A01G260200.1	Wheat	mitochondrion, vacuole	79.94	79.48
TraesCS3B01G559000.1	Wheat	cytosol	40.12	73.8
TraesCS3B01G558800.1	Wheat	cytosol	44.77	73.68
TraesCS3B01G559100.1	Wheat	vacuole	68.9	68.7
TraesCS5B01G330900.1	Wheat	extracellular, vacuole	35.76	66.49
TraesCS3B01G338500.1	Wheat	extracellular, golgi, vacuole	66.28	66.47
TraesCS2B01G092900.1	Wheat	golgi, vacuole	49.71	50.0
TraesCS2B01G093000.1	Wheat	golgi, vacuole	49.42	49.56
TraesCS3B01G289800.1	Wheat	vacuole	48.26	49.4
TraesCS5B01G383000.1	Wheat	vacuole	47.97	48.67
TraesCS5B01G382800.1	Wheat	vacuole	47.97	48.39
TraesCS5B01G195300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	47.67	47.4
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	42.15	46.77
TraesCS5B01G195400.1	Wheat	vacuole	48.84	46.15
GSMUA_Achr5P05340_001	Banana	vacuole	44.77	42.9
VIT_13s0074g00070.t01	Wine grape	vacuole	32.27	40.51
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	21.22	40.33
VIT_10s0042g00010.t01	Wine grape	vacuole	36.63	40.0
VIT_00s0575g00010.t01	Wine grape	vacuole	35.76	39.42
VIT_10s0042g00030.t01	Wine grape	vacuole	31.1	39.19
VIT_13s0074g00080.t01	Wine grape	vacuole	36.63	39.13
VIT_10s0071g00020.t01	Wine grape	vacuole	34.88	38.84
VIT_10s0042g00020.t01	Wine grape	vacuole	36.34	38.82
VIT_10s0042g00050.t01	Wine grape	vacuole	36.34	38.82
VIT_10s0071g00010.t01	Wine grape	vacuole	36.05	38.51
VIT_00s0575g00020.t01	Wine grape	vacuole	35.76	38.2
PGSC0003DMT400063282	Potato	extracellular, vacuole	17.15	38.06
PGSC0003DMT400056839	Potato	vacuole	34.3	37.82
VIT_17s0000g04600.t01	Wine grape	vacuole	36.05	36.15
KRH07462	Soybean	vacuole	36.34	36.02
CDX73037	Canola	vacuole	34.3	35.98
VIT_10s0071g00250.t01	Wine grape	vacuole	35.47	35.88
CDX96505	Canola	vacuole	34.01	35.67
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	28.49	35.38
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	24.13	35.32
Solyc12g039070.1.1	Tomato	nucleus	34.01	35.14
KRH45407	Soybean	nucleus	35.17	34.67
TraesCS5B01G133600.1	Wheat	extracellular, vacuole	37.21	34.22
KRH54773	Soybean	vacuole	32.85	33.53
PGSC0003DMT400063277	Potato	vacuole	32.27	33.43
KRH03206	Soybean	vacuole	32.56	33.33
Solyc03g114560.2.1	Tomato	extracellular	31.69	33.33
TraesCS5B01G395100.1	Wheat	vacuole	38.66	33.33
VIT_17s0000g04610.t01	Wine grape	vacuole	35.47	33.24
AT1G74010.1	Thale cress	vacuole	31.1	32.92
CDY47729	Canola	vacuole	31.1	32.92
KRH56734	Soybean	vacuole	32.56	32.75
Bra008124.1-P	Field mustard	vacuole	30.81	32.62
Bra003820.1-P	Field mustard	vacuole	30.52	32.51
Solyc03g114550.1.1	Tomato	vacuole	25.87	32.48
Bra008127.1-P	Field mustard	vacuole	30.81	32.32
CDY45863	Canola	vacuole	30.52	32.31
Solyc03g114530.2.1	Tomato	vacuole	31.1	32.23
Solyc03g114540.1.1	Tomato	vacuole	31.1	31.85
PGSC0003DMT400063286	Potato	vacuole	30.81	31.74
AT1G74020.1	Thale cress	vacuole	30.81	31.64
PGSC0003DMT400063274	Potato	vacuole	30.81	31.55
CDY66189	Canola	vacuole	27.03	31.31
CDX96507	Canola	vacuole	29.65	31.29
Bra015943.1-P	Field mustard	vacuole	29.65	31.29
CDY45861	Canola	vacuole	29.94	31.21
CDY47728	Canola	vacuole	29.65	31.19
Bra008126.1-P	Field mustard	vacuole	29.36	30.89
CDX73038	Canola	vacuole	29.07	30.77
AT1G74000.1	Thale cress	vacuole	29.36	30.7
CDX73039	Canola	vacuole	29.07	30.67
TraesCS4B01G215300.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	36.63	30.51
CDX96506	Canola	vacuole	28.78	30.46
CDX68204	Canola	vacuole	28.78	30.18
CDY66188	Canola	vacuole	28.78	30.18
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	36.05	27.37
KRH63133	Soybean	peroxisome, vacuole	13.66	27.17
TraesCS1B01G217600.1	Wheat	extracellular, golgi, vacuole	27.91	26.16
TraesCS2B01G196500.1	Wheat	golgi, vacuole	26.16	24.52
TraesCS2B01G196600.1	Wheat	golgi	25.87	24.38
Bra015944.1-P	Field mustard	vacuole	28.78	16.58

Protein Annotations

EnsemblPlants:TraesCS2B01G281700.1	EnsemblPlantsGene:TraesCS2B01G281700	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF28	PFAM:PF03088	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF63829	TMHMM:TMhelix	MapMan:50.4.3	:	:	:

Description

No Description!

Coordinates

chr2B:-:390113939..390114973

Molecular Weight (calculated)

37283.8 Da

IEP (calculated)

9.453

GRAVY (calculated)

-0.208

Length

344 amino acids

Sequence
(BLAST)

001: MASGTRDLGV ALAVLLLLFM FGASAAAAVV PSIDATRTRH LPLPPGLLRG PESVAFDAKG NGPYSGVSDG RVLKWNGDRL GWTTYTYSPG YSSEACTASV
101: RRPETVTESR CGRPLGLRFH LKSGYLYIAD AYKGLMRVAP GGGEATVLVT EADGAPLRFT NGVDVDQVTG EVYFTDSSMK YQRSQHEMVT RTGDSTGRLM
201: RYDPRTGKVI VLKAGITYPN GLAISVDRTH LVISSTGPCK LLRYWTKGPK TGTIELLTDL PGYPDNVSPD KRGGYWVALH HEKTELPFDV DSHLLALRIN
301: ADGKIIEEMR GPKGMRPTEV VERTGGRLFV GSVELSYVAV ATRK

Best Arabidopsis Sequence Match ( AT1G08470.1 )
(BLAST)

001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP

Arabidopsis Description

SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.