Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, vacuole
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G281700.1 | Wheat | golgi, vacuole | 88.58 | 65.41 |
| HORVU7Hr1G028580.1 | Barley | golgi, vacuole | 81.89 | 59.09 |
| HORVU5Hr1G091230.1 | Barley | golgi, mitochondrion, plastid, vacuole | 81.1 | 57.87 |
| TraesCS2A01G260200.1 | Wheat | mitochondrion, vacuole | 73.62 | 54.05 |
| HORVU7Hr1G028550.2 | Barley | plastid | 37.4 | 53.37 |
| HORVU3Hr1G109810.1 | Barley | golgi, vacuole | 70.47 | 51.29 |
| HORVU6Hr1G026020.1 | Barley | cytosol | 48.03 | 49.19 |
| HORVU3Hr1G074780.3 | Barley | cytosol, vacuole | 68.5 | 46.52 |
| HORVU5Hr1G009400.2 | Barley | cytosol, mitochondrion, plastid, vacuole | 24.8 | 46.32 |
| HORVU5Hr1G078340.1 | Barley | golgi, vacuole | 41.34 | 43.03 |
| HORVU5Hr1G093840.1 | Barley | vacuole | 52.36 | 39.23 |
| GSMUA_Achr3P06240_001 | Banana | cytosol, mitochondrion, peroxisome, vacuole | 46.85 | 38.39 |
| HORVU2Hr1G013460.2 | Barley | golgi, mitochondrion, vacuole | 42.91 | 37.46 |
| HORVU2Hr1G012970.2 | Barley | mitochondrion | 51.57 | 37.43 |
| HORVU3Hr1G065520.3 | Barley | extracellular | 46.46 | 36.65 |
| HORVU5Hr1G058940.2 | Barley | vacuole | 51.97 | 35.97 |
| HORVU5Hr1G058910.2 | Barley | endoplasmic reticulum, extracellular, vacuole | 47.64 | 34.97 |
| Bra008125.1-P | Field mustard | cytosol, peroxisome, vacuole | 31.89 | 34.47 |
| GSMUA_Achr5P05340_001 | Banana | vacuole | 46.85 | 33.15 |
| VIT_10s0042g00010.t01 | Wine grape | vacuole | 37.8 | 30.48 |
| VIT_13s0074g00080.t01 | Wine grape | vacuole | 37.4 | 29.5 |
| VIT_10s0042g00020.t01 | Wine grape | vacuole | 37.4 | 29.5 |
| PGSC0003DMT400056839 | Potato | vacuole | 36.22 | 29.49 |
| VIT_00s0575g00010.t01 | Wine grape | vacuole | 36.22 | 29.49 |
| HORVU5Hr1G114720.1 | Barley | plastid | 22.05 | 29.47 |
| VIT_10s0071g00020.t01 | Wine grape | vacuole | 35.43 | 29.13 |
| VIT_00s0575g00020.t01 | Wine grape | vacuole | 36.61 | 28.88 |
| VIT_10s0042g00050.t01 | Wine grape | vacuole | 36.61 | 28.88 |
| VIT_13s0074g00070.t01 | Wine grape | vacuole | 31.1 | 28.83 |
| VIT_10s0071g00010.t01 | Wine grape | vacuole | 36.22 | 28.57 |
| VIT_10s0042g00030.t01 | Wine grape | vacuole | 30.32 | 28.21 |
| Solyc12g039070.1.1 | Tomato | nucleus | 36.22 | 27.63 |
| KRH63133 | Soybean | peroxisome, vacuole | 18.5 | 27.17 |
| KRH07462 | Soybean | vacuole | 36.61 | 26.8 |
| CDX73037 | Canola | vacuole | 34.25 | 26.52 |
| CDX96505 | Canola | vacuole | 34.25 | 26.52 |
| PGSC0003DMT400001736 | Potato | cytosol, peroxisome, vacuole | 28.35 | 25.99 |
| HORVU5Hr1G043200.4 | Barley | vacuole | 38.19 | 25.94 |
| VIT_10s0071g00250.t01 | Wine grape | vacuole | 34.65 | 25.88 |
| AT1G74010.1 | Thale cress | vacuole | 33.07 | 25.85 |
| KRH45407 | Soybean | nucleus | 35.43 | 25.79 |
| Bra003820.1-P | Field mustard | vacuole | 32.68 | 25.7 |
| Solyc03g114560.2.1 | Tomato | extracellular | 33.07 | 25.69 |
| VIT_17s0000g04600.t01 | Wine grape | vacuole | 34.65 | 25.66 |
| Bra008127.1-P | Field mustard | vacuole | 33.07 | 25.61 |
| PGSC0003DMT400063277 | Potato | vacuole | 33.07 | 25.3 |
| CDY47729 | Canola | vacuole | 32.28 | 25.23 |
| HORVU5Hr1G095260.1 | Barley | extracellular | 39.37 | 25.06 |
| Bra008124.1-P | Field mustard | vacuole | 31.89 | 24.92 |
| CDY45861 | Canola | vacuole | 32.28 | 24.85 |
| AT1G74020.1 | Thale cress | vacuole | 32.68 | 24.78 |
| CDY45863 | Canola | vacuole | 31.5 | 24.62 |
| Solyc03g114550.1.1 | Tomato | vacuole | 26.38 | 24.45 |
| Solyc03g114540.1.1 | Tomato | vacuole | 32.28 | 24.4 |
| PGSC0003DMT400063286 | Potato | vacuole | 31.89 | 24.25 |
| VIT_17s0000g04610.t01 | Wine grape | vacuole | 35.04 | 24.25 |
| Bra015943.1-P | Field mustard | vacuole | 31.1 | 24.23 |
| CDX96507 | Canola | vacuole | 31.1 | 24.23 |
| Solyc03g114530.2.1 | Tomato | vacuole | 31.5 | 24.1 |
| CDX73038 | Canola | vacuole | 30.71 | 24.0 |
| CDX73039 | Canola | vacuole | 30.71 | 23.93 |
| CDY66189 | Canola | vacuole | 27.95 | 23.91 |
| CDY47728 | Canola | vacuole | 30.71 | 23.85 |
| Bra008126.1-P | Field mustard | vacuole | 30.71 | 23.85 |
| CDX68204 | Canola | vacuole | 30.71 | 23.78 |
| CDY66188 | Canola | vacuole | 30.71 | 23.78 |
| VIT_17s0000g04580.t01 | Wine grape | extracellular, vacuole | 16.93 | 23.76 |
| KRH54773 | Soybean | vacuole | 31.5 | 23.74 |
| CDX96506 | Canola | vacuole | 30.32 | 23.69 |
| PGSC0003DMT400063274 | Potato | vacuole | 31.1 | 23.51 |
| AT1G74000.1 | Thale cress | vacuole | 29.92 | 23.1 |
| KRH03206 | Soybean | vacuole | 30.32 | 22.92 |
| HORVU4Hr1G061230.2 | Barley | peroxisome, vacuole | 38.58 | 22.9 |
| KRH56734 | Soybean | vacuole | 30.32 | 22.51 |
| HORVU5Hr1G114800.1 | Barley | extracellular | 18.5 | 21.86 |
| PGSC0003DMT400063282 | Potato | extracellular, vacuole | 12.2 | 20.0 |
| HORVU1Hr1G052450.8 | Barley | extracellular, golgi, vacuole | 27.95 | 19.29 |
| VIT_17s0000g04590.t01 | Wine grape | endoplasmic reticulum, peroxisome, vacuole | 34.25 | 19.21 |
| Bra015944.1-P | Field mustard | vacuole | 30.32 | 12.9 |
| HORVU7Hr1G019170.1 | Barley | cytosol | 8.27 | 12.21 |
| HORVU4Hr1G016850.1 | Barley | cytosol | 7.48 | 10.92 |
| HORVU6Hr1G025030.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G064060.1 | EnsemblPlantsGene:HORVU2Hr1G064060 | Gene3D:2.120.10.30 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016844 | InterPro:6-blade_b-propeller_TolB-like | InterPro:IPR011042 | InterPro:Strictosidine_synth_cons-reg |
| InterPro:Strictosidine_synthase | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF28 | PFAM:PF03088 | SUPFAM:SSF63829 | UniParc:UPI000B466A5D |
| UniProt:A0A287I7G8 | MapMan:50.4.3 | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:433845804..433846818
Molecular Weight (calculated)
28115.0 Da
IEP (calculated)
9.876
GRAVY (calculated)
-0.346
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: YMIRTLVKQI XRPETVTESR CGRPLGLRFH LKSGYLYIAD AYKGLMRVAP GGGEATVLVT EVDGAPLRFT NGVDVDQVTG EVYFTDSSIN YQRSQHEMVT
101: RIGDSTGRLM RYDPRTEKVT LLKAGITYPN GLAISADRTH LVISSTGPCK LLRYWTKGPK TGTIEPLTDL PGYPDNVRPD KKGGYWVAIH REKKELPFGV
201: DSHLLAMRIN ADGKIIEEMR GPKGVRPTEV VERTSGRLFV GSVELTYVAV ATRK
101: RIGDSTGRLM RYDPRTEKVT LLKAGITYPN GLAISADRTH LVISSTGPCK LLRYWTKGPK TGTIEPLTDL PGYPDNVRPD KKGGYWVAIH REKKELPFGV
201: DSHLLAMRIN ADGKIIEEMR GPKGVRPTEV VERTSGRLFV GSVELTYVAV ATRK
001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP
Arabidopsis Description
SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.